Os05g0559900

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Annotated Information

Function

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Expression

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Structured Information

Gene Name	Os05g0559900
Description	contains InterPro domain(s): IPR010978, IPR010989
Version	NM_001062838.1 GI:115465406 GeneID:4339592
Length	9055 bp
Definition	Oryza sativa Japonica Group Os05g0559900, complete gene.
Source	Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome	Chromosome 5
Location	Chromosome 5:27950054..27959108
Sequence Coding Region	27950453..27950479,27950568..27950642,27950940..27951053,27951135..27951194,27951370..27951593 ,27951705..27951792,27952472..27952690,27952809..27952907,27953345..27953410 ,27953560..27953643,27953735..27953794,27953947..27954231,27954695..27954741 ,27954831..27954893,27955348..27955462,27955864..27955938,27956133..27956204 ,27956850..27958030,27958519..27958663
Expression	GEO Profiles:Os05g0559900
Genome Context	<gbrowseImage1> name=NC_008398:27950054..27959108 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>
Gene Structure	<gbrowseImage2> name=NC_008398:27950054..27959108 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>
Coding Sequence	<cdnaseq>atggcgtggtggtcggggaaggtgtcgctcggtggcctgcaggatatcgcaggggccgtgaataagatcagcgagagcgtgaagaacatcgagaagaacttcgacagcgcgctcgggctcgaggagaagcgcgacgatgaggaaggatcaggatcacatgcatctaactctgatagaatagggttctttaatcctgtcatggcattcatgggaaataatggcgaggaggattctgctgaagcatcagaaaagcagcaacctccaaaaagtacaaccgcagaacagagccaaagtgcctccacagaggcgcctacatccaaggtagatgcttctgaagaatcggaatcaacacaatctccaaagccttctgaacaaggagagactcttatcagctcaactgagccacctgtatccaaggctgaggtttctgagcaactagcaacaccaaaaactccaaaatcactttcagcaacagaagaaaagcctagtcattctactgaatcacccacatataaaggggattcagaagcaccacaatctcccacagatccatcaacagcagaagaaaacagtggatccactgagacgggtaatacaattgagacgggaaaccaggatcatcaagagacaaaatattctggtcctaatgatgaagcgccacaaagtcagattggagaatctgacagaggcatacctgatggtacaaagccttcttcacctactgaattagatcaatcaggtaacacgggaacaactgaataccttcatgctggaacggaaaacatagatgataaaaatgccatacaatcacaaccactagattccattctagccagttcagatgatgtaaatgaagctgtgaaaattgttaaaggagctgatgatcgaaatgaaataagcagttcacatgagaatactgacaccgttgaccaagctagtcatgtggaagtcatagaacatgatgagcatactaatgctgctgaaaatgatgaagaagctaatcgaacagaagcacaggtagcaactgttgttgaaagggaggagaatacaatggtgcagcttgaagaccttagctcaatgtccataattgtgagcaatgattcaaactcgcaaaatgagtcggtgcccacttctgcagatgtgcctgttggactggtagaggttggttccaattcaaatgatttgagaaaagaagaaaatatccagggctctgttacaactagcaatcatctggaatctgtcggtgctgtcgctgaacttgagaaattaagacgtgaaatgaagatgatggaagctgcattgcaaggtgctgcaagacaatcccagtccaaagctgatgaaattgcaagactgatgaatgagaatgaacaactgaaatcaacaattgatgatcttaagagcaagtcagctgaagccgaaatggatgcacttaaagatgaatatcaccagagagtagcaactcttgaaaggaaggtgtatgccttgaccaaagaacgggatacattaaggagagagcaaaataaaaaaagtgatgcagctgctcttttgaaagaaaaggatgaaattatcagtcaggtcatggcggaaggtgaagagctatcaaaaaaacaagctgctcaagaagctactatgcggaaacttagggcacaggttcgtgaacttgaagaagaaaaacaacggctgaactcaaagatccaggttgaggagacaaaggttgagagtattaaaagagataaggctgcaacggagaaattgctacaggaaacaatagaaagaaatcaaactgaacttgcagctcagaaggagttctacaccaatgctcttaacgcagctaaagaggctgaggcattagccgaagcaagagtcaacactgaagccaaagttgaacttgagagtcgtttaagagaagcttgtgaaaaagaaaatatcttaattaagacgattgaggagttgaggcatgctctcacaaggcaagaacaggaggctgcattcagggaagaaaggctgaaaagggattatgatgatcttcaaaggcggtatcaatccagtgaacttcgttacaatgaactggtcacacaagttcctgaatccaccagaccacttctaaggcaaattgaagccatgcaggaaacagctgctcgaagggcagaggcttgggctggtgtagagagaaccttaaactctcgacttcaggaagcagaagcaaaagctgctgctgcagaagaaaaggaacggtctgtaaatgaacgtttgtctcaaagctcatcccggataactgttctagagacccagattacaattcttagaacagagcagacacagctgagtcgatctcttgaaaaagagaggcagagagcatccgaaagtagacaggagtacctggcaattaaggaggaggcggcaatgcaagaaggacgggcgaaacagcttgaagaagaaataaaggagcttcgtactaggcacaaaaaggagctgcaagatgcagcagaacacagggagctgcttgagaaggaccttgaaagagaaaaggctgccagggcagagcttgagaaaacatcttcccgtgatgcaccaaaaattccgcttccagatcagacaagaaatgctcctctcagaaagctctctagttctggcagtatcaatagtctggaagaaagccatttccttcaagcatcattagatttgtcagacaacgcttcattagagaggagaatgtctgctgaaagtaatatgtcgtattatcttcggagcatgactccaagtgcttttgaatcagcactccgtcagaaagatggagagctagcttcttacacatcgcgtttggcctcattagaatctattcggaattctctggcagaggagttggtgaaaatgactgaacagtgtgagaagttgcgtaccgaggcttctgctctgcctggtttaagggctgagctggaagctttgaaacaaagacactttcaagctctagaactaatgggggaacgtgatgaagagttggaagagctaagaaatgacattgttgacctaaaagagatgtacagagaacaagtggatcttcttgttagccagctccaatctttgggtgctcgtgtatag</cdnaseq>
Protein Sequence	<aaseq>MAWWSGKVSLGGLQDIAGAVNKISESVKNIEKNFDSALGLEEKR DDEEGSGSHASNSDRIGFFNPVMAFMGNNGEEDSAEASEKQQPPKSTTAEQSQSASTE APTSKVDASEESESTQSPKPSEQGETLISSTEPPVSKAEVSEQLATPKTPKSLSATEE KPSHSTESPTYKGDSEAPQSPTDPSTAEENSGSTETGNTIETGNQDHQETKYSGPNDE APQSQIGESDRGIPDGTKPSSPTELDQSGNTGTTEYLHAGTENIDDKNAIQSQPLDSI LASSDDVNEAVKIVKGADDRNEISSSHENTDTVDQASHVEVIEHDEHTNAAENDEEAN RTEAQVATVVEREENTMVQLEDLSSMSIIVSNDSNSQNESVPTSADVPVGLVEVGSNS NDLRKEENIQGSVTTSNHLESVGAVAELEKLRREMKMMEAALQGAARQSQSKADEIAR LMNENEQLKSTIDDLKSKSAEAEMDALKDEYHQRVATLERKVYALTKERDTLRREQNK KSDAAALLKEKDEIISQVMAEGEELSKKQAAQEATMRKLRAQVRELEEEKQRLNSKIQ VEETKVESIKRDKAATEKLLQETIERNQTELAAQKEFYTNALNAAKEAEALAEARVNT EAKVELESRLREACEKENILIKTIEELRHALTRQEQEAAFREERLKRDYDDLQRRYQS SELRYNELVTQVPESTRPLLRQIEAMQETAARRAEAWAGVERTLNSRLQEAEAKAAAA EEKERSVNERLSQSSSRITVLETQITILRTEQTQLSRSLEKERQRASESRQEYLAIKE EAAMQEGRAKQLEEEIKELRTRHKKELQDAAEHRELLEKDLEREKAARAELEKTSSRD APKIPLPDQTRNAPLRKLSSSGSINSLEESHFLQASLDLSDNASLERRMSAESNMSYY LRSMTPSAFESALRQKDGELASYTSRLASLESIRNSLAEELVKMTEQCEKLRTEASAL PGLRAELEALKQRHFQALELMGERDEELEELRNDIVDLKEMYREQVDLLVSQLQSLGA RV</aaseq>
Gene Sequence	<dnaseqindica>8630..8656#8467..8541#8056..8169#7915..7974#7516..7739#7317..7404#6419..6637#6202..6300#5699..5764#5466..5549#5315..5374#4878..5162#4368..4414#4216..4278#3647..3761#3171..3245#2905..2976#1079..2259#446..590#ggctcagatcacacccggtggcgagctgctgcgatcaccgacgcggcgcacccacgccaccaccaccacccgcggccgaacgcactaagcctctctctctctctctctctctcgccgccgccacgacccgacgcgacgcgacggggcccagcccacgcccaactccccctacatctccccccgccgcggcggcgggggcgcggtgaagcttcctccccgctccgctccgccgcgctgctctgctctgcctctgcagccgccgccgccgttcccggcccttcgatcggggcggggggccagatcccccccgcgcgtcggccgagtgggagtggggcgcgcgggacggaggtgcggatctgattggtctacgcgcgagatctagccgggtgctgctgttcctgctggtggttgcggggatcggagcggaggcgggggaggaggagggatggcgtggtggtcggggaaggtgtcgctcggtggcctgcaggatatcgcaggggccgtgaataagatcagcgagagcgtgaagaacatcgagaagaacttcgacagcgcgctcgggctcgaggagaagcgcgacgatgaggaaggtatggtagcgtcgctggtacactggaattgtcactctcgcccccttctcctccgtgtaattcggctgcattggggcactcgtgcttgtttgcaagtgtttgatcgaaactatgatgagatgaatcagtgtcggcaataacttttttcccatttatttcgttctacatctcgctatctgtagagattgggtaatttgatcgtaggaggatggatcctgcttatcacttgttccattacatccgatgtaccccgtaggttcttaagtcatactctatatactggccaactggagcctaagtactgccagtacccggcagctgaatcatgtgtgtttgattggtttagtgacatatttcatacttcttttccaactggttctatttgtaacagtcgttggtctatgagtagagcggtcatatttggggtagttaagcttattgtttctttgtttacatggttaaccgaattgtgtgtctttttgttgtaggatcaggatcacatgcatctaactctgatagaatagggttctttaatcctgtcatggcattcatgggaaataatggcgaggaggattctgctgaagcatcagaaaagcagcaacctccaaaaagtacaaccgcagaacagagccaaagtgcctccacagaggcgcctacatccaaggtagatgcttctgaagaatcggaatcaacacaatctccaaagccttctgaacaaggagagactcttatcagctcaactgagccacctgtatccaaggctgaggtttctgagcaactagcaacaccaaaaactccaaaatcactttcagcaacagaagaaaagcctagtcattctactgaatcacccacatataaaggggattcagaagcaccacaatctcccacagatccatcaacagcagaagaaaacagtggatccactgagacgggtaatacaattgagacgggaaaccaggatcatcaagagacaaaatattctggtcctaatgatgaagcgccacaaagtcagattggagaatctgacagaggcatacctgatggtacaaagccttcttcacctactgaattagatcaatcaggtaacacgggaacaactgaataccttcatgctggaacggaaaacatagatgataaaaatgccatacaatcacaaccactagattccattctagccagttcagatgatgtaaatgaagctgtgaaaattgttaaaggagctgatgatcgaaatgaaataagcagttcacatgagaatactgacaccgttgaccaagctagtcatgtggaagtcatagaacatgatgagcatactaatgctgctgaaaatgatgaagaagctaatcgaacagaagcacaggtagcaactgttgttgaaagggaggagaatacaatggtgcagcttgaagaccttagctcaatgtccataattgtgagcaatgattcaaactcgcaaaatgagtcggtgcccacttctgcagatgtgcctgttggactggtagaggttggttccaattcaaatgatttgagaaaagaagaaaatatccagggctctgttacaactagcaatcatctggaatctgtcggtgctgtcgctgaacttgagaaattaagacgtgaaatgaagatgatggaagctgcattgcaaggtgctgcaagacaatcccaggtatcatttccacgtggtctactagcaacccagttatgcttgtacggtcgaaactgtatgttgagaaaactaccacatgattttccacttgtaacaaaacttcctttagtttgtgaatgcatatttgttctataaatgaagatccataaatgtttctgtgacttatggaaatatgctctaaccctgcagaacgctagttgatgaacaatatctgatttgattttgatagtagcacaatgtttttctaggaaatgaactgctgctagactggatctatctgctcaattaattgcattcaagtttcattcttctatttttggtgcagcatttttactgaaaaagagaaataaacagagacacgttcatctaatattttccacatgctcagtgagcattcctatttttgtcttatattcttggaatgcattaaagcatggacagctatttaaaactcttgtctttcatatttgcctgatttatatgaggaaacaaatataattccatgagtatatgatgctcatatgtattcagcatacagtcagaggtttttacaactaagtgcatcttttacttccatattctatcatttctgcgcaacatacatacctgggcccttcacttgtctcacaacacttcttcctgcagtccaaagctgatgaaattgcaagactgatgaatgagaatgaacaactgaaatcaacaattgatgatcttaaggtatgcttgatagcagactctgtgtttttccttctctaaaaaggtatttaagatgttatatttagcaattgctggaggttttagttaatctgtatgaaactgaatgacatgaatattatacaattatcctaagttactcagtagtgctataagcatgtgatgaacttggattgttttgttttgacatggcacagagcaagtcagctgaagccgaaatggatgcacttaaagatgaatatcaccagagagtagcaactcttgaaaggaaggtgagacacgttatcacttattaagacagtagtccgatagacataattatgctaagactatactctggtgaagttcttaaatggcactgcctagttcctgcagtcaaagtagtaaattgtttatttttcaaagtagcaggatgctattttcaccacaaaaagttattaccatattaattgataaactattttacttgttggatgcaccttacatattcatgtatttatctaaagtcggttttatttattcgatacttaattctaatagtttggattaaagcatgatgtatttattttttaaatacaggctaaccacattctttcttggtacctagtgcatctaaaataagattattcttatcgctgatatgttttatatttgcatgcttcaatgtttataggtgtatgccttgaccaaagaacgggatacattaaggagagagcaaaataaaaaaagtgatgcagctgctcttttgaaagaaaaggatgaaattatcagtcaggtcatggcggaaggtataatgaaccaacattttctttgtctcttctattatgattgcgtataaatgttaaatttgcaatacacaatgttcgttccgttgtaatgttgagacagtttgaagtgttgatccacaaatatattgcactgtgccgaataccctctgttcataacaatcatcatgattacatcacacaagcacatattagcaacattagaactatggacatggataatcgtagtgcttcaccagtaaggttgactctggttgccattggtaggcaaataggcatagacatttctctgtgaaaagggcctggaatttatataggtttgctaatgtttcttcttatgccccttttatccagctttacactttagagcccatttgattttttgcccccttcatttttatgtttagtaggttttgaggcatttatttggcatcaacaatttttttacaatgaacaggtgaagagctatcaaaaaaacaagctgctcaagaagctactatgcggaaacttagggcacaggcatggactgcaactcttatcattaagcatattttgtgcaaattaaatattttaccaatttcactttcttccattttgttttctttcaggttcgtgaacttgaagaagaaaaacaacggctgaactcaaagatccaggtaaaaaggataccaactttgggtatctatgaacattatacaaattttcttatctgctttaatgatgaaaaatacttaactttactttctttgttagacataatgaaaaatatgtctatgtttgcaataacgcaaaatcaaatttgggcctcctttagctggtttgttctgtcgtgcttgtttggtgtataccataatactgtgatattctactagacaatcacttgcttcacctgtgtaactgtgtccaaactcatgatttggttacaacagatatactcccccaccctcgcacccccaccgcccaaaatcttgttagctagatagctttgagacattgcttccatagaataatggagttacttcagcttcctaaatggagtacctatattcccagtatcatatctatttgctgtcagacattgagtgtagtaatgtatttagcacttttctgatacaacaggttgaggagacaaaggttgagagtattaaaagagataaggctgcaacggagaaattgctacaggaaacaatagaaagaaatcaaactgaacttgcagctcagaaggagttctacaccaatgctcttaacgcagctaaagaggctgaggcattagccgaagcaagagtcaacactgaagccaaagttgaacttgagagtcgtttaagagaagcttgtgaaaaagaaaatatcttaattaagacgattgaggagttgaggcatgctctcacaaggcaagaacaggaggtaagttattaaaatatgtaactgcattggtatatctacctttcatcattgtcagtagaaatagtcgacaatatgtgctgatccaatccatgccttaaggatttgtccagttaggagcctactaactgtagatactttttgggatgttccaggctgcattcagggaagaaaggctgaaaagggattatgatgatcttcaaaggcggtatcaagtaagcatggcccttctaggtttgtttgtatattgcactgtaaaacagtcatcagctaatacttactattattcgttatttaatacttcagtccagtgaacttcgttacaatgaactggtcacacaagttcctgaatccaccagaccacttctaaggcaaattgaagccatgcaggtactggtgcatttgttttctttcccttgggctgcaattactttgctttcttcaattatttggagtctggataacacttctgcaatttgtgagttgacctcttttttctgttgtgagctggttaattaattgtgtgctaacattaacaggaaacagctgctcgaagggcagaggcttgggctggtgtagagagaaccttaaactctcgacttcaggtctgtttgtgttctgaaattatctgtttaacagtgatcccataacagcaatgaagaattctagaacaacaagaaggggcatttgttattattgtagaatgcacatggttaatgacaacaaaagatattttttaaatgtacttgagagaccagtcctttcacattggttaaaccttttgtaaatattttttataattaatatattcttactgtgggggcttcccctacatcgcaatgatattggtaacactgcaatgatatggcaagcctacagactcctctagttgtggcggctaccttctgatttcgcttttttttttttaccaaagcaatcatattagtaactgccttgccttagtgcagtaggcaaaaattcagaaacactaaaataaatatctcaatgacataatactttgttactttgctctaatatgcaggaagcagaagcaaaagctgctgctgcagaagaaaaggaacggtctgtaaatgaacgtttgtctcaaagctcatcccggataactgttctagagacccaggtttgtgcatcaagttattctgaaataaatcactattaacattaccataggtttatggccaaggtttagttttagtcagaaaggtgacttcttacaaaaatattttgttcttatgcagattacaattcttagaacagagcagacacagctgagtcgatctcttgaaaaagagaggcagagagcatccgaaagtagacaggagtacctggcaattaaggaggaggcggcaatgcaagaaggacgggcgaaacagcttgaagaagaaataaaggagcttcgtactaggcacaaaaaggagctgcaagatgcagcagaacacagggagctgcttgagaaggtagccaatctgctatgctattttttttttcaggaaaagagctggatgtatgtcattgttttgattggtttggtaacttttatggtataccaatgttgtcctgtcaagttcattaatgtgtggagccttggggaaactgtttttaacctttttaaaccgaccatcagctacaggtccgacataaacattgaactttggaatctctcttacagtaggtccttctcaggatttaacaaaagggtttgtttatgtgtgtgggtactgatgatgcttttgtatttactatgttgtttaccgcacgaggaagtttttcgactccctctgatcccaaatataggttgctttagacttgtgcacatgaattaaggaagcaactccctttcatttatactgtataggaaagatgaatcatttatttattacttgtgagaagggtggcatttatttagcaagggcaaacagggaagaacagctgcaaaagtgcgtagaagttccataacgatttactacatttggaattggatggggtatatggcatcaatcatctcttctatgaaatggcgtagttgaccataccaatcaataattgtgatcaacctacttattttctggtttatacatgaccaactcggaagaatttctcgccttacatattttattttacgaattacgttttcaggaccttgaaagagaaaaggctgccagggcagagcttgagaaaacatcttcccgtgatgcaccaaaaattccgcttccagatcagacaagtatgctgtttattcgtttttgactaatttgtacgagttcaatccaacttctttgtatctgttgcctacttgccttacctgtcgtttgtttcctctttgcatctcatgaaggaaatgctcctctcagaaagctctctagttctggcagtatcaatagtctggaagaaagccatttccttcaagcatcattagatttgtcagacaacgcttcattagagaggagaatgtctgctgaaagtaatatgtcgtattatcttcggagcatgactccaagtgcttttgaatcagcactccgtcagaaagatggagagctagcttcttacacatcgcgtttggtatgtcctttggagatttcctgaaagtactaattctcattttggatatttcttatttaagtacccttgcatgtgttcttgttaattttcgtcgtatttgctattagttgagcttgctggtgttagcacgacatgcacatgcccatcactgaactaatgctactctatattacaggcctcattagaatctattcggaattctctggcagaggagttggtgaaaatgactgaacaggtaaatcctgatgaaccaacggaagtttttttattcaactaccaacatgtgtgcaaactaaactaaattttttcaatgcagtgtgagaagttgcgtaccgaggcttctgctctgcctggtttaagggctgagctggaagctttgaaacaaagacactttcaagctctagaactaatgggggaacgtgatgaagaggtacggcttccctagaaggcaccatgactttatatttgattattttctatggtatataaaagaaacctttttccatgaattggatttatatggagctcgtatactggaattttttataaagtccctatatgatcgccaaacccacaattcctgtgccatgtaggttgcgtagctaccatcttttaaggcacaaaaattatctgaatagagataaagacaattaataagcacatgcttataaacctttacctgttatttcgtgtggatttgctctgaatttctgtactgtgcttgcagttggaagagctaagaaatgacattgttgacctaaaagagatgtacagagaacaagtggatcttcttgttagccaggtttgaagcttatcagttgaactttattttttcatttgataaatcgttgttgccataagtccctaacccccggcttccattttatcagctccaatctttgggtgctcgtgtatagtgctgctgtatgtcagtatgtagcttcggctgccatccatttttttttcgcatcgcgctaatctactaagccccatacagcagatctgaagcttggcgtgtttcttcgaaattcaagccgtgacaaataccgaaagttcatagccataccagtgtgaaaatattcgtttttgtacatcttgaagcacaagtctttttggacagttgagcacccttgtttaatttagtaggttactctgttgtatactagtttggatagctttacggtttttaagcctattgtttgcaattctttccagtgaagtgtatcaaatttgtaattcgattaaaagtgtatcacagcggaatgcaaccccaataatatgagagctcgtttttgtcattttcctcaggttcgacc</dnaseqindica>
External Link(s)	NCBI Gene:Os05g0559900, RefSeq:Os05g0559900