Os05g0304200

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Revision as of 10:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0304200| Description = PAP fibrillin family protein| Version = NM_001187405.1 GI:297723940 GeneID:9267914| Length = 2755 bp| Definition = ...")
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Gene Name

Os05g0304200

Description

PAP fibrillin family protein

Version

NM_001187405.1 GI:297723940 GeneID:9267914

Length

2755 bp

Definition

Oryza sativa Japonica Group Os05g0304200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:13686909..13689663

Sequence Coding Region

13687034..13687189,13687296..13687328,13689001..13689285

Expression

GEO Profiles:Os05g0304200

Genome Context

<gbrowseImage1> name=NC_008398:13686909..13689663 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:13686909..13689663 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tcacctaatacccaaaccctagacacgggagccgagcaagaggaggcgtacgggtgcggcggcggcgagccgccgagccggcgactgcggcgctggcgcggccgcacgactcgtcggcgcagggctgcagggtcccccaggagcaggtccgcggttgggccggagagcgtggctgcgtggcgtttgacggcgacggcccgtacacgggcgtgtcggacgggagggtgctcaagtggattcccctggagtgccgatgggtcgagcactcatccgccagccacaacagttgctaggctcctccccatcaccctcgggcaggtgtttcagaggatcgatgttgttagcaaggacttcggcaacatcgtcgatgtcgagctcggcgggccatggctgctgctgccagtggaggtgatggcaacactggctcacaagtttgggatcatcggtgaagttggtttctgtgttcaatgttaa</cdnaseq>

Protein Sequence

<aaseq>SPNTQTLDTGAEQEEAYGCGGGEPPSRRLRRWRGRTTRRRRAAG SPRSRSAVGPESVAAWRLTATARTRACRTGGCSSGFPWSADGSSTHPPATTVARLLPI TLGQVFQRIDVVSKDFGNIVDVELGGPWLLLPVEVMATLAHKFGIIGEVGFCVQC</aaseq>

Gene Sequence

<dnaseqindica>2475..2630#2336..2368#379..663#cactctcatttctttccctctgcattccccacacccgcggcggcggcggcggcggcatctcgcttccgcggccggtagccctgatcggcgtcggcacctctctaggcgtcggcggcaggcttccccaccccgaaagcagccgcgacggtactcccgcaccacctcccgcctttctgctgcctcgcatcgcctcccgccgccgctacatcctccgtccactcgctgcttcatctgatgttgcctcccataatccacagcagcgctccatatggtggtgcagcgcttgatccggagcagctccgatgctggacacgatggccaggagcaactcagcccatttcgacattttccccaattctcctccccatctaaccctaatcacctaatacccaaaccctagacacgggagccgagcaagaggaggcgtacgggtgcggcggcggcgagccgccgagccggcgactgcggcgctggcgcggccgcacgactcgtcggcgcagggctgcagggtcccccaggagcaggtccgcggttgggccggagagcgtggctgcgtggcgtttgacggcgacggcccgtacacgggcgtgtcggacgggagggtgctcaagtggattcccctggagtgccgatgggtcgagcactcatccgccagccacaacagtaagcttcaatctctatctatctgtctttgttgaatgttggttgatcctgcgattcatccggtagcactgttccctcgatctgcaagttctgcatgcatttacctgcgtatgatgctactcagatctaagtacagagtacagttgcaactcctctcagcaatgataattcttggcatgtgtacttaagtctattattcccctgtcctacagaaaggaaatcaatttatgtagcagagctaccgtatccacttattggcaatggcgttcggcacactaccattacattgcatgattcttctacactaccattgcattgcatgattcttcttcaattcttccatgagaatccagaggcatttatcccatttccatattgttggatttttgggtctaaaatatgaagagaaaaaatggtcttgctcttgaacaattgttcatgaattttaaatcctcaattcatgagtccccctgcctcaaacattgcacaattttcaatcctctatatatttcacatattgccactcttatatgttgaacaattgtcaaatactagttgagtactttctatttgttgaacaattggcagttagtagttaaatcagttatataaatatatgaaattatacccaattatgttatacaattcagagggcattatggcaattttcaagttaaagcactaggggatttccatttgcacgtgtgagcactagggtagattactatgcacttagtactgtatcctgtaactatgctagtctgtaatctatgagtgccattgaatggttagtttgcagtctgctgcttgaaaaaaaaagggtatatggtactactaaattaattccattgtctgatgatgtcactagccgtttgcctgtcataaaaaaacagcatcactacagtagctaggatgctgaaacagctctatcatttgggattatcctacaccaaaagtgaaataatactatactctaacaatctagcatcactctagcaggagtgaatagaaatcaatactcctagatgacccatgatttcaggccttgcttgcattattaaaaattgagatttagttttccattgagattaaaatgtatattgtagaattggtactcatctgttataataccttttgatttagtatttactctgtttaccaaaataacgacaaattttcgtcttctgatgccactggtgcagcgcgctgtgtgttccactctagtgttatagtacttagtgatgttgctgctacattgttccactggtgatataaattttggaaccgttgtatgcatgtactttgtagaaatgaagcatgtttaaatggtgtccataactttacaccacactttacggtcatgctatatgcctatagtctgtagaaatgaagcatgtataggaagttactcgtatcataactttagtgtctaaattttagtgctaaactcctatgcattctagttcggttgcttgtttgcttggccaatgaaatgaggtgggttggggatggggacattgagatatgttagtgcaatatattatggggacatcagattggtgttgcaaagtagccctatcattaaaaaactaatgtcgtatctatagattgtttcttgttgtttatctagcgcataaaaaaaataatctaacatatggttatgtactatcaggttgctaggctcctccccatcaccctcgggcaggtcagaaaaacaattgatcctgaattattattcagctgaatctgatttggagaatcagaaatttggtgttggtataatctgaaacttggtttcgtttgattatcaggtgtttcagaggatcgatgttgttagcaaggacttcggcaacatcgtcgatgtcgagctcggcgggccatggctgctgctgccagtggaggtgatggcaacactggctcacaagtttgggatcatcggtgaagttggtttctgtgttcaatgttaatgttgatgttggggctatttgtaatgaagttggtatctgtgttcaatgtttatgttggtcctatttgtaatgtgtgcaaagttctaattgttgctccaaatgggccaatgctaaaaattttctag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0304200, RefSeq:Os05g0304200