Os05g0563400
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os05g0563400 |
|---|---|
| Description |
Similar to Auxin response factor 5 |
| Version |
NM_001187594.1 GI:297724318 GeneID:9268260 |
| Length |
5353 bp |
| Definition |
Oryza sativa Japonica Group Os05g0563400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:28115960..28121312 |
| Sequence Coding Region |
28116183..28116467,28116557..28116613,28116722..28116892,28117007..28117091,28117717..28117807 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:28115960..28121312 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:28115960..28121312 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgaccgggatcgacctcaacaccgtcgaggaggacgaggaggaggcggcggaggaggtggcggcgaacggctcgtctccggctccggcgagggcgggcgcggtgtgcctcgagctgtggcacgcctgcgccgggcccgtggcgccgctgccgaggaaagggggcgtcgtcgtgtacctgccgcaggggcatctcgagcacctcggcgacgcgcccgcggcggcggcggccgcggccgccgtgccgccgcacgtcttctgccgcgtcgtcgacgtcaccctcctcgcggacgcggcgaccgacgaggtgtacgcgcagctctcgcttgtcccggagaaggaggaggtggcgaggcgggcggacgacggcgagggcgaggacggggacggcatgaagcagcggttcgcgcggatgccgcacatgttctgcaagacgctcacggcgtccgacaccagcacgcacggcggcttctccgtgccgcgccgcgccgccgaggactgcttccctccactggattacagccagcagcggccgtcgcaggagcttgttgccaaggatttgcacagcactgaatggaggttccgccatatttaccgaggccagccacgtcggcaccttttaaccacaggttggagtgcatttgttaacaagaagaagcttgtttctggggatgccgtactatttttgcgaggtgatgatggggagctaagactgggagttcgccgtgcagctcagcttaaaaatgggtctgcttttccagcactttacaaccagtgttctaatcttggtacacttgccaatgttgcacatgcagtggctacagaaagtgtgttcaacatatactacaatcccaggttaagtcagtccgaattcattgtaccctactggaagttcatgaaaagcctcagccaaccattttctgttgggctgaggttcaaaatgagatatgaaagtgaagatgctactgaaagaaggtacaccgggataattactggaagtggtgatacagaccctatgtggcatggttcgaaatggaaatgtttgttggtgaggtgggatgacgacgctgagttccgtcgaccaaacagggtctctccttgggagattgagctgactagttcagtgtcaggatcccatttgtccacaccccattcaaagcgattgaaaccatgtcttccccatgttaatccagaatacatggttccacgtggaggtggttgtcctgattttgcggaatctgcccaattccacaaggtcttgcaaggtcaagaattattgggttttaaatctcatggtggtactgctgctgctacttctcagccatgtgaagcaaggcatttacagtacatcgatgagcggagttgctccagcgatgcgagtaacagtatcctaggggttccaagacttggtgatagagcaccacttggaaacccaggattttcctaccattgctcaggctttggggagtctcacagactccaaaaggtcttgcaaggtcaagaattatttcgtccctaccgaggaactttggttgatgcgtctatgggtagtaatgggtttcatcaacaagatagtcctcgtgcaccaggtgtggtgaataaatggcaggcacaacttcatggccgtgctgcttttcatggaccaccagcactggctcttccatctcaatcatcatctccgccatctgtcctaatgtttcagcaagctaattcaaagatgcccaggttggagtttgggcatggacagttggacaagcacgagaatgataggcgtgttaggtttggtccttctgaaggaattgaaagaagagagcaaagaataccactccagccttatcctacttctggagaagtgatagatggacaggttacagttgagaagtctcactcccctggtcgacatggaaaggatggtccagataacaaagctgttggcacaaatagttgcaaaatatttggcatctctttgactgagaaggttccagcaagagaagaactagatgatggcgacgccaactattcactccagtctttgaagcaagtgccaaaatccctgggcaatagttgtgctaccgttcatgagcaaaggcctgttgttggcagggtgattgatatttcaactatggatatgatgatctga</cdnaseq> |
| Protein Sequence |
<aaseq>MTGIDLNTVEEDEEEAAEEVAANGSSPAPARAGAVCLELWHACA GPVAPLPRKGGVVVYLPQGHLEHLGDAPAAAAAAAAVPPHVFCRVVDVTLLADAATDE VYAQLSLVPEKEEVARRADDGEGEDGDGMKQRFARMPHMFCKTLTASDTSTHGGFSVP RRAAEDCFPPLDYSQQRPSQELVAKDLHSTEWRFRHIYRGQPRRHLLTTGWSAFVNKK KLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGTLANVAHAVATES VFNIYYNPRLSQSEFIVPYWKFMKSLSQPFSVGLRFKMRYESEDATERRYTGIITGSG DTDPMWHGSKWKCLLVRWDDDAEFRRPNRVSPWEIELTSSVSGSHLSTPHSKRLKPCL PHVNPEYMVPRGGGCPDFAESAQFHKVLQGQELLGFKSHGGTAAATSQPCEARHLQYI DERSCSSDASNSILGVPRLGDRAPLGNPGFSYHCSGFGESHRLQKVLQGQELFRPYRG TLVDASMGSNGFHQQDSPRAPGVVNKWQAQLHGRAAFHGPPALALPSQSSSPPSVLMF QQANSKMPRLEFGHGQLDKHENDRRVRFGPSEGIERREQRIPLQPYPTSGEVIDGQVT VEKSHSPGRHGKDGPDNKAVGTNSCKIFGISLTEKVPAREELDDGDANYSLQSLKQVP KSLGNSCATVHEQRPVVGRVIDISTMDMMI</aaseq> |
| Gene Sequence |
<dnaseqindica>224..508#598..654#763..933#1048..1132#1758..1848#1922..2086#2510..2629#2721..2793#3672..3831#3915..4780#4853..4918#cggcttccccctcattcatggccattaccacgatgtgtcaccccaccccaccaccgcccgctgctccacttctcctcctcctcctcctcctctcctagtagtagcaacctacggacaccacccccacccgcttcatttatcacttgtctccccctctccctcgcctgctccgctgctcttgtgcttcgcgcctcgcctgacctcgctgtcgctgccgccagccatgaccgggatcgacctcaacaccgtcgaggaggacgaggaggaggcggcggaggaggtggcggcgaacggctcgtctccggctccggcgagggcgggcgcggtgtgcctcgagctgtggcacgcctgcgccgggcccgtggcgccgctgccgaggaaagggggcgtcgtcgtgtacctgccgcaggggcatctcgagcacctcggcgacgcgcccgcggcggcggcggccgcggccgccgtgccgccgcacgtcttctgccgcgtcgtcgacgtcaccctcctcgtgcgtcccttctcaatgctcgtatcgtacgtgttctcgtcttcacggcggcgcgaggggattgattggctttgtgttcttctctgcaggcggacgcggcgaccgacgaggtgtacgcgcagctctcgcttgtcccggagaaggaggtgcgcgcccgcctgcgcgaagcagttggagcatttggtttgatgattccgttttttttttttgttttttgacctgagttttcttctcttctcttccggggattgaaggaggtggcgaggcgggcggacgacggcgagggcgaggacggggacggcatgaagcagcggttcgcgcggatgccgcacatgttctgcaagacgctcacggcgtccgacaccagcacgcacggcggcttctccgtgccgcgccgcgccgccgaggactgcttccctccactggtcggtgtatattggagaaagaaaaagaaaagcttccttttttgaagtaaagattttatctttttttgggggtttgtttagctgatgaaatccttcggattgggaaccttgcaggattacagccagcagcggccgtcgcaggagcttgttgccaaggatttgcacagcactgaatggaggttccgccatatttaccgaggtagagcagaaaaaaaacatggactttgagaacaagtttttttttaacctgttttgatgactgagatgctctacgcagctgtgccatgcatgcattccatcttcattaggcttctgtactgtgcatgcacttcccctggctggaagcctctgcgtcctgaatgattcaatggggattgaatattagtactggatttgtgctttagttgtttctgacgaccagcgcgtcttgttcagatagagcagtaatagcttgtgaatacacacatgcatcaaccgagctcaccgagaacttgcactttgcggttatgatcgacatctgtactttttgcatatccacctgttttatgatgctaaatcatgactgggctgacatgatatgattgtatgcaatgtgttgattctccaaacactctaatatgtgttggctaggctacattatgtttctccatagctccgacattgttagttaatcaatcatgtttaactgtattttacattttttcttctttcttaaaaacctttgtattgtaatgtctggtcccttcttgaggattgcaaaggacaaacataacaagttaagtggtccttgatttctgatagatctacatctgaatatgctacaggccagccacgtcggcaccttttaaccacaggttggagtgcatttgttaacaagaagaagcttgtttctggggatgccgtactatttttgcggtaggccactcgatcattcagataattatcacatgttgacgatcttttctaaagattcttaatcaatctgcagaggtgatgatggggagctaagactgggagttcgccgtgcagctcagcttaaaaatgggtctgcttttccagcactttacaaccagtgttctaatcttggtacacttgccaatgttgcacatgcagtggctacagaaagtgtgttcaacatatactacaatcccaggtaatgaagaacctcgagttattttgttaatgctcccgacagctgatgttctagaactttcttgctgttggctggtggcagccttaaattgtgcccattatttactgcttgtttgagctatttgttgatagtcatacattatgccagctcagcatgtgcaatcacatggttttatctggttgcatttgtagtcttgctgaaattcgaagttaggcgctgttgcaatagcttggaaagttgtatttgtaggttgtaactgttctttttaaaacaaaagattatatgaacagaatcaatagtctcgtttcatatatttatcaatgtagtcgttttgcatttgatgctttacagagctagcgcctacttctgttcttgcaacaaaacagtgtcttatttcaaagctctcttctgaaatattgacaggttaagtcagtccgaattcattgtaccctactggaagttcatgaaaagcctcagccaaccattttctgttgggctgaggttcaaaatgagatatgaaagtgaagatgctactgaaagaaggtagatggacaatagttctacacttgtactagaatggactgaactgcattctagattggtgatgcatatgtgataacttataattttacaggtacaccgggataattactggaagtggtgatacagaccctatgtggcatggttcgaaatggaaatgtttgttggtaaactaccctatctcttgtgcctcgtaatatatgtttatgggcatctgctgtgtattcaattaacattttttttgtagtgttgctgccatttcactaattaaacccttgtttttttcctagtgccgcgtggcatttgcatcatgtggccatcttgacttgtttgtttggattatattttacatataacaagaatttgatgctaatcttggttcccaaatttgctagcatggaacccattcactctattaactgatgtagcagttgagctttagtttacatattactaaaacacagtttagttgtcttgatgcattttgtttcttatccaaactcaagtcagatagtagtgatttttcatgaactcaatctggaaagtaacaggttttcagataattgagcactgcggtactattacacaatgtcagcttacatggttatgttttcagagtgacagttgcactgactagcaagtttggttgctcacaataacagtcttagatttgaagatatcagttaatcttcctggtttgttttcaaaagtggtaatcttaacttgcaatttgacttccactagtagtttttgtagctagtctagagctgtgttctacactcagcctggtttcttcagcgaaatattaggtggatgaagttatggacactgctagcttgatcttcttttgaaattttaccttccaggagtacttaggcatgtgaaagtttttagactatggctctcctgagttaaaatttcaatttttgagcacataattctgttctcatggccacaccataagtcccgtaaaagccattattgcaatcagatcctctttatgaccatatgtatatgatttatcgacctatgtctaccttggtaggtgaggtgggatgacgacgctgagttccgtcgaccaaacagggtctctccttgggagattgagctgactagttcagtgtcaggatcccatttgtccacaccccattcaaagcgattgaaaccatgtcttccccatgttaatccagaatacatggttccacgtatgtctttcttctagctattaccagttaataggatggttctgttggatgcactgtgccgatttaatttatccttttgtcaggtggaggtggttgtcctgattttgcggaatctgcccaattccacaaggtcttgcaaggtcaagaattattgggttttaaatctcatggtggtactgctgctgctacttctcagccatgtgaagcaaggcatttacagtacatcgatgagcggagttgctccagcgatgcgagtaacagtatcctaggggttccaagacttggtgatagagcaccacttggaaacccaggattttcctaccattgctcaggctttggggagtctcacagactccaaaaggtcttgcaaggtcaagaattatttcgtccctaccgaggaactttggttgatgcgtctatgggtagtaatgggtttcatcaacaagatagtcctcgtgcaccaggtgtggtgaataaatggcaggcacaacttcatggccgtgctgcttttcatggaccaccagcactggctcttccatctcaatcatcatctccgccatctgtcctaatgtttcagcaagctaattcaaagatgcccaggttggagtttgggcatggacagttggacaagcacgagaatgataggcgtgttaggtttggtccttctgaaggaattgaaagaagagagcaaagaataccactccagccttatcctacttctggagaagtgatagatggacaggttacagttgagaagtctcactcccctggtcgacatggaaaggatggtccagataacaaagctgttggcacaaatagttgcaaaatatttggcatctctttgactgagaaggttccagcaagagaagaactagatgatggcgacgccaactattcactccagtctttgaagcaagtgccaaaatccctgggcaatagttgtgctaccgtgagtgttttatgatgagtaattttcatgcactcagtaatgtaaactgctttttaactaaaagctctgcaggttcatgagcaaaggcctgttgttggcagggtgattgatatttcaactatggatatgatgatctgatttatgagctggatttgcaaaattatctggaggtgaagtaacactaggattgcttccaaccacatgttagtgatactccaaaggcataaaatcctcacctgtgacagttttacctagaaatgttatgatcattgttttgccgttgttccagattttgctgtggatctccagatggtggccgagtatcagggagatggagggactgatgattctgatatttttatcttagatgtaggcgttggagcacttatcatgtgacatagtacctagctgctcgtctgcatttgttgcctctgcaactttaactgtcagcggcatttgtcgccgctggaaccatctaagtacgtgtttataagctgtaagctatgacaagcgcattagagggtgctggtactgttagaacattaattaatgtcagtagcatgctttgatctt</dnaseqindica> 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