Os05g0575300
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os05g0575300 |
|---|---|
| Description |
Similar to Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) |
| Version |
NM_001062931.1 GI:115465592 GeneID:4339689 |
| Length |
5227 bp |
| Definition |
Oryza sativa Japonica Group Os05g0575300, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:28737703..28742929 |
| Sequence Coding Region |
28737703..28737837,28737918..28737950,28738463..28738576,28738673..28738822,28738910..28739008 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:28737703..28742929 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:28737703..28742929 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>gaagtactggaaagtggtccagtgaaagtggaagagatggcaaagaagaaggaatttcttgacgaggaagatttggacaagttggaagacagaccccctattgtaactatcatgggccatgtcgatcatggaaagactaccctgttggattatatacgcaagagcaaggtggtggcatctgaggctggcggaataacacaagggattggtgcctatcaggttattgtacaggttgatggaaaccctcatgcttgtgtttttcttgatactccagggcacgaggcatttggtgcaatgagagctcggggtgctagggtaactgatatctgtatcattgttgtctctgcggatgatggtgttcgtccacaaacaaatgaggcaattgcacatgcaaaggcagctggagtccctattgtgatagccataaacaagatagacaaggaaggagctaatgctgaacgggtcatgcaagagctttcccaaattggacttatgccagaggcgtggggtggtgatatcccaatgattcagataagtgctcttaatggagagggtgtagatgaactattggagactatcattcttgttgctgagctgcaagaattaaaggccaatcctcatagaaatgcaaagggtacagttattgaagcatgccttgacaaagctaaaggatctcttgccaccctagttgtacagaatggaaccctaaacaagggtgatattgttgtgtgtggtgaggcttttggaaagatccgtgcaatgtatgatgatggtggaaagcttatcgataaggctgggccatccaatgccgtgcaggttattggcttgaataatgtaccccttgctggtgatgaatttgagtctgtggacaaccttgatgttgcacgtgaaagggcaaacgcacgtgctgaagcactgagaattgaaaggatatcttcgaaagctggggaagggaaagtcactctgtcatccattgctgcatctgtttcatctggaaaacaagtaggaattgatacacacgagcttaatatcatccttaaagttgattttcagggttcagttgaggccattaggcaagcaatccaagtgctgcctcaagaaaatgtctccttgaggttcctacttcaagctccgggagatgtgagtgtcagtgatgttgatctggctgttgcttcagaagggattatatttggttttaatgtcaaagctccaggatcagttaaaagctatgctaagaagaaaagtgtggaaattcgtctgtacaaggtgatctatgatttgattgatgatttgcggaatgccatggaaggacttcttgaacttgctgaggaggaagtaccaattggttcagccaaagttcgtgctgtttttagtagtggcagtggcaaggtggcgggttgcatgattactactgggaaagttgttcatgactgcaatgttcgggttcttcgtaaagggaaagaagtttatatgggtacacttgattcgttaagacgggtgaaagaaactgtaaaggaggttggtgctgggctagagtgtggcattggggtagatgattttgacgaatgggaggaaggtgatgtcgtggaggcattcaacacagttaagaagacaagaaccctagaggaagcctctgcttctgtgactgctgctctaaaggatgccggcgtccagctgtag</cdnaseq> |
| Protein Sequence |
<aaseq>EVLESGPVKVEEMAKKKEFLDEEDLDKLEDRPPIVTIMGHVDHG KTTLLDYIRKSKVVASEAGGITQGIGAYQVIVQVDGNPHACVFLDTPGHEAFGAMRAR GARVTDICIIVVSADDGVRPQTNEAIAHAKAAGVPIVIAINKIDKEGANAERVMQELS QIGLMPEAWGGDIPMIQISALNGEGVDELLETIILVAELQELKANPHRNAKGTVIEAC LDKAKGSLATLVVQNGTLNKGDIVVCGEAFGKIRAMYDDGGKLIDKAGPSNAVQVIGL NNVPLAGDEFESVDNLDVARERANARAEALRIERISSKAGEGKVTLSSIAASVSSGKQ VGIDTHELNIILKVDFQGSVEAIRQAIQVLPQENVSLRFLLQAPGDVSVSDVDLAVAS EGIIFGFNVKAPGSVKSYAKKKSVEIRLYKVIYDLIDDLRNAMEGLLELAEEEVPIGS AKVRAVFSSGSGKVAGCMITTGKVVHDCNVRVLRKGKEVYMGTLDSLRRVKETVKEVG AGLECGIGVDDFDEWEEGDVVEAFNTVKKTRTLEEASASVTAALKDAGVQL</aaseq> |
| Gene Sequence |
<dnaseqindica>1..135#216..248#761..874#971..1120#1208..1306#1425..1487#1568..1723#1854..1919#3278..3514#3607..3882#4264..4452#4663..4824#gaagtactggaaagtggtccagtgaaagtggaagagatggcaaagaagaaggaatttcttgacgaggaagatttggacaagttggaagacagaccccctattgtaactatcatgggccatgtcgatcatggaaaggtactaagccagtatcaatttttcagtttgttaactgttctgaagcactgtttgtatgacactgttatttctgtttgcagactaccctgttggattatatacgcaagagcaaggtagacactccttggcatgttcctcctgttggtgattttgggattttagatgatactcccttcattcttttttagatggcattttagtatgttggttttgttctcaaatagaaacatcttggattttctgggtaaaattaaagctagtggaatgtgcatttgtttttttaccatgatgcacattctaggatgagttgatagtacatagtttctcttcaaagtgttcaatcacattcacagttccacgtggcaccctgcctcttgattcgaagaactttcaccgtgccttgcctgaccagtgttggtattggaacgaatgaaggctttagattaatgagtagatgacgggctaattagtccatttcctggcattgaacagttgcattgttctctgcaacattggctaaaacatcatgttttggtgaacaaagggagtggaataattactaatgttaaaacatggaaacacctatttcctataaacctgtagatctaaataaagttagttacaggtggtggcatctgaggctggcggaataacacaagggattggtgcctatcaggttattgtacaggttgatggaaaccctcatgcttgtgtttttcttgatactccagggcacgaggtatagcaaaagtatatgtatattttaccatatgttctctctttctggttgtattaacgtggggcattacaactcctaattcttcaacaacaataggcatttggtgcaatgagagctcggggtgctagggtaactgatatctgtatcattgttgtctctgcggatgatggtgttcgtccacaaacaaatgaggcaattgcacatgcaaaggcagctggagtccctattgtgatagccataaacaaggtctatttcctagtcatttcatcatcgattacagttgttaaaaggaaaattctcttgtcatgtttcagtaacctcctaattaagcagatagacaaggaaggagctaatgctgaacgggtcatgcaagagctttcccaaattggacttatgccagaggcgtggggtggtgatatcccaatgattcaggttgttgattctcacaatctggacgagaaatttccttgctatatactacatcaacttgtatcttttttcccatgaacttgttacctatttgatctgatttagttgttatgtctgtcagataagtgctcttaatggagagggtgtagatgaactattggagactatcattcttgttgctgaggtttgcttcagatttgttccttctttttcttctaatctattgagtttattttttcacatgcttttgttgtggatttgaagctgcaagaattaaaggccaatcctcatagaaatgcaaagggtacagttattgaagcatgccttgacaaagctaaaggatctcttgccaccctagttgtacagaatggaaccctaaacaagggtgatattgttgtgtgtggtgaggcttttggaaaggttggtttgctcaattcctacttgttatgatttgatccagaatatgtaatatatcttgcatgaaaaaaagaagcacaaactaacaaacatgggtcatttggagtataacatagcattgttatcatttcagatccgtgcaatgtatgatgatggtggaaagcttatcgataaggctgggccatccaatgccgtgcaggttttccctttcctttattttcctcgttccttttaccatgatccttcctaacatttcctaatataccatatttcggatgaaaaagttactgaaattacagttggttctcctcatgagatggcccctctggccatgacgactctaaacaaaatactcatcacaagtctgatgcaattttgacataaagagaaagcatctgaaactataaatgtttatgtgcattagaactgttagttacatgacattgatgaatatggataaatagaggtcgctgttgactagctagcaaatataaacctgctcaagtcctaaatggcatccttatatgtgagctcttttacatgatgtaaaaatgcacccttttatcagaagctgaaaattctaaaatttgaattttgtagacaggagaagacaagaaaaaacacaagtgggttttctttaatcaccctggtattcctgagcttgattgttgctatcaacttctcttgctttcttccagggactatattatgatgagtaattacacctcagcccattattggagacctttgtggcccatgttattcagtatggtgggattagtctccaatggagaatttagtttgtggtcagcatataagctcacatgttctaaccacaaaacctccaggtttacacatttaatttggcaagaatgtgtaagtacagtgctatctgccatgtgggaccacacttgtagaagggccaaggtgtgttgactggaggaaatgcacggggcacatggccagaaggcacatgaggcttacagataagctattttagtaaaatttagtaaaataggtttagagataataataataataataaatacctgtcaatcacaactactgtctctattcttctagctattcaccgagtgaagcacgtgacatatatgtgcatggacctgtccctacagaagggttaggctaatgtagattctggaagctggagtgtgagtgcctatgagcctatggaggcatacagcattgcaccaagagtgattctggtcatttgccatgtaggacattgtgctgccgggagcatcacaagttcatgtgttcctctagattaattcttttttcatgaagcaaggatgagagtataagtactgtgcaatacatacatgggcctgctcgtatagaaggattaagctaatgccaattttggaagctggatgctacacatatactatcacaattcatggattgaaaaggaaacatttcttccatagcttgctgccttttactttagtaccattgagcattaaatgttcttcaaaagtttgtagtattattgtaagcatcctgaatttatcaagaaatgatatgttatgacaggttattggcttgaataatgtaccccttgctggtgatgaatttgagtctgtggacaaccttgatgttgcacgtgaaagggcaaacgcacgtgctgaagcactgagaattgaaaggatatcttcgaaagctggggaagggaaagtcactctgtcatccattgctgcatctgtttcatctggaaaacaagtaggaattgatacacacgagcttaatatcatccttaaagttgattttcaggtatccactgctcttgcaaactatatgcattatcgaatatgaactattcattttttctatttgctaaatatgccaagcatatgatcaaatagggttcagttgaggccattaggcaagcaatccaagtgctgcctcaagaaaatgtctccttgaggttcctacttcaagctccgggagatgtgagtgtcagtgatgttgatctggctgttgcttcagaagggattatatttggttttaatgtcaaagctccaggatcagttaaaagctatgctaagaagaaaagtgtggaaattcgtctgtacaaggtgatctatgatttgattgatgatttgcggaatgccatggaaggacttcttgaacttgctgaggtaagcagaaaattgcttttcaacttttatgaaccagttgagtcttgggacatgcccttgttgataggtccacatggaccacattcctttgcatgctgggaaatccttcttctaaaatacttcctccgtttcacaatataagacttccttgcgttgcccacattcatatagatgttaatgaatctaggcatatatatgtgtctagacttattaacttctaaatgaatatgagtaatgctagaaagtcttacaatctgaaacagagggagtattatttatttctccatttccatgatagtttggtgtgctttagagtatttacttgtcatttcaagttgctggaatatttggatgtccatcctcattgtctttctttatcaggaggaagtaccaattggttcagccaaagttcgtgctgtttttagtagtggcagtggcaaggtggcgggttgcatgattactactgggaaagttgttcatgactgcaatgttcgggttcttcgtaaagggaaagaagtttatatgggtacacttgattcgttaagacgggtgaaagaaactgtaaaggaggtacgtacgataaacatgaatccatcaactatttttatttcactgcactctttgagaaagttatttacccgcaatatcacaatgtgtttcctgagtatcactgcaaaaagaaaaagttttcacattattaatttgttatattcacattcactttattttgatattagtccccgtaatgtgatgttcaacatttacatttttccccactaggttggtgctgggctagagtgtggcattggggtagatgattttgacgaatgggaggaaggtgatgtcgtggaggcattcaacacagttaagaagacaagaaccctagaggaagcctctgcttctgtgactgctgctctaaaggatgccggcgtccagctgtagaagtggcaaagctgataggcatccatcatacaacaactgcaggggaatcggagccaaatttatcatggcaagaaagaaagaaagacggggtgcattattgatcacattgctgttgttagcgaagaacaacaaactggttactcgatcgtaaatacgacgaacttatgcaagccatagtacagtagtcaccaaacctgagcttagccgtctcttatagcctgcatcagctgatgctgtattttgatgtacataacaagagaggagacagctgttacctttttttagtttgccactaacaggtagataagcagtgttgtctaattttacaccacctgatttttgacacaggatgtaattactctgtaatggtgacaccatcattattcaatcatcattcatgcat</dnaseqindica> 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