Os05g0305600

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Revision as of 10:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0305600| Description = Disease resistance protein family protein| Version = NM_001061684.1 GI:115463098 GeneID:4338364| Length = 5124 bp| ...")
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Gene Name

Os05g0305600

Description

Disease resistance protein family protein

Version

NM_001061684.1 GI:115463098 GeneID:4338364

Length

5124 bp

Definition

Oryza sativa Japonica Group Os05g0305600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:13794950..13800073

Sequence Coding Region

13795857..13799318

Expression

GEO Profiles:Os05g0305600

Genome Context

<gbrowseImage1> name=NC_008398:13794950..13800073 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:13794950..13800073 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttccgtcgcaagatggcccgtaagatcaaggatatcaaggtgaaatataatgagattgtgcgacaaagaagggatgccaatactatacgcagtagtttacaagtggatcaacctattcctagcagtaacatgataatcggggagttgtccttgttgagtaatgttgaagaatcaaaaatacctatcagggaccaggagatggatacaattgtatctatgcttgtagactctaatgagggagagaattgttggatagtttccgttgttgggctaggcgggtccggcaaaactactctggccaaacacatttgccatgtcaacaagataaaggagctatttaaagagagaattttctgggtccatgtgtctagagagtttgatgtgcaaaagctcatcggcaagctatatgaaactatcgttggcagaaagtcagattgtcaaccccaacagcagatggtccgtgaaatttccaagcagttatgttgtaataagttccttcttgttcttgatgatgcttggcatacggatgggtatgagtggggacaattcatggtgcatctacaggataggtcaattggaagtaggattttgctaactactcgtgatcgaaaggttgcagaagtagtcaaatccaaacaaatacatgagttggtgttcttaacagagtctgagagttggagcttgttcctaaagtgttctgggtgggtggaggatgatttgggatcagaatttatacagcttggaaaagagattctgaagaaatgtggtggggtacctctagcaatcagaactattgcaggtgtcctctgtgaaaagagggagataagtacttggagagccataagagggagtgacttatggaacgttgggagtgtaaacgacagggtgtttgcatccttaaagttgagctacattcacctggcagataaactaaagcagtgctttacattctgctccatatttccaaaaggctatgtgatcaataaagacagattggttgcacaatggatagcccatggattcatcacgccgatgaaggaagagcagccaaaagatattgcaagtgaatattttgattctcttgtgaaagctggcttctttcttcaagatacgattgaagagtttggttacttgcacaagatgcatgacctgattcacgatcttgctcaatattgtgaaaagaatgaagtggtgacatctcgaccgaacagtatgtctacatatcagacacacaaatgcagatatttatctttgacatcaggaaatgagaaggtcaagaggggcttacttgacaaggttcatgctttatatatgtctgatggcaacctatcattcgataaaccagttaagaagagttgctatatccgcagtgtaattttggacaatgaaaactgtaccacttttccaccagtcttgttgaagtttgaatttcttggatatcttgaaatccatggagttgattgcaagaaacttcctgaagcaatctccggctgttggaacttgcagtcacttcattttattcggtgcagcggatttgtgatgttacctgagtctgttggcaaacttaagaagctaagaactttagagctaaattatgttattgatcttgagagtttgccgcagtccattggtgattgtcaaggtcttcaatccttgcaactacatagctgtaacaaacttcaaggcatgccgacttcgataggcagaattgagaacctaagggtgcttcatattacgtcgtgtccatgtatgcaaaaactaccgtcagagccctgtggggagtccaacaacctggagataatcaacttatctaattgccacaacttccatggcctgccaagcacatttgcctgcaaagcattgcgtactcttaatctttacaataccaagattaccatgttacctcaatgggtaacttcaatcgatactctagaatgtctagaccttggatattgccacgagctcatggaatttcctaaaggtatagcaaacttgagaaggcttgcagttttgaacttagagggttgcagtaaactacgttgcatgccatcaggtttcagacaactgactcgtttaacaaagatgggtttgtttgttgttggatgtgatggtgataatgcaaggatctcagagcttgaaacccttgatatgataagtggtaagatgaaaattatcaaccttaaatatacgctggatccaactgatgcagataaggccagcttgaagaggaagaacaacataaagtatctggagttggactggtctcgaggtgaaactgaaaaggagttagtaacagatatggtcatggagcaagacctggctgtgctgaacgctcttgaaccaccatcccgaattgaggaaatattaatatattattatggaggtccctgtttgccatggtggatgaagaagcaaactgattcttcttgctgggaaagcacaatgttaaagcaaaccaatccatgtcagcttatttatctaactagaatgacactacatgaaattccaaacttgaagcatatgcaaggacttgttgagttgcctttgctgaattaccttgaactatttggattgcctaatttggaggacatgtggaccacgacaggaggtgcagaaatcaggggtgatgaattgcaggcaaaatactgtttccctgccctgtccaccttatggataaggggctgtccgagattgaatgtggtgccctacttcccatcatctttggagagactttttttaagagaaagcaatgatcagctgctatcttcaggcagcttctcccatctccttcctccacttgcccatgaatcttctccttgcagcaatgcgcactcagcggtgccccgactgaaggaactaactataattaaaatgacaggatcatcgtgtggttgggatttcctgcagtaccttgatgcactagagtacttcaatatttttggcagcaatgacctaacacaattacctgagagcatgcgaagcctcacctccctccacaagctaatcatccacgactgtcccacctttggcatgctgccagaatggcttggagaactgtgttctttacagtccctgtttatcaaggggaccccaatgatggacagtctccctcaatcgattggctgccttacgtccctcacgcacttgactattgcatgcgataatttgaaacagctgcctgagacgtttcaccacctcacctcccttcgagaactcgacttggcaggatgtggtgccctgactgcactgccagaaaacatcgggaaactctctgcacttgaagcactatatgtcggaccgtgctctgccattcaatgcctgcccgagtccataaaacaccttactaatctccggcgattgaacatttctggttgccctaatttggtcaagcgttgcgagcaagaagtgggggaagactggcagcttgtctctcatattcctaatttaataagtgactaa</cdnaseq>

Protein Sequence

<aaseq>MFRRKMARKIKDIKVKYNEIVRQRRDANTIRSSLQVDQPIPSSN MIIGELSLLSNVEESKIPIRDQEMDTIVSMLVDSNEGENCWIVSVVGLGGSGKTTLAK HICHVNKIKELFKERIFWVHVSREFDVQKLIGKLYETIVGRKSDCQPQQQMVREISKQ LCCNKFLLVLDDAWHTDGYEWGQFMVHLQDRSIGSRILLTTRDRKVAEVVKSKQIHEL VFLTESESWSLFLKCSGWVEDDLGSEFIQLGKEILKKCGGVPLAIRTIAGVLCEKREI STWRAIRGSDLWNVGSVNDRVFASLKLSYIHLADKLKQCFTFCSIFPKGYVINKDRLV AQWIAHGFITPMKEEQPKDIASEYFDSLVKAGFFLQDTIEEFGYLHKMHDLIHDLAQY CEKNEVVTSRPNSMSTYQTHKCRYLSLTSGNEKVKRGLLDKVHALYMSDGNLSFDKPV KKSCYIRSVILDNENCTTFPPVLLKFEFLGYLEIHGVDCKKLPEAISGCWNLQSLHFI RCSGFVMLPESVGKLKKLRTLELNYVIDLESLPQSIGDCQGLQSLQLHSCNKLQGMPT SIGRIENLRVLHITSCPCMQKLPSEPCGESNNLEIINLSNCHNFHGLPSTFACKALRT LNLYNTKITMLPQWVTSIDTLECLDLGYCHELMEFPKGIANLRRLAVLNLEGCSKLRC MPSGFRQLTRLTKMGLFVVGCDGDNARISELETLDMISGKMKIINLKYTLDPTDADKA SLKRKNNIKYLELDWSRGETEKELVTDMVMEQDLAVLNALEPPSRIEEILIYYYGGPC LPWWMKKQTDSSCWESTMLKQTNPCQLIYLTRMTLHEIPNLKHMQGLVELPLLNYLEL FGLPNLEDMWTTTGGAEIRGDELQAKYCFPALSTLWIRGCPRLNVVPYFPSSLERLFL RESNDQLLSSGSFSHLLPPLAHESSPCSNAHSAVPRLKELTIIKMTGSSCGWDFLQYL DALEYFNIFGSNDLTQLPESMRSLTSLHKLIIHDCPTFGMLPEWLGELCSLQSLFIKG TPMMDSLPQSIGCLTSLTHLTIACDNLKQLPETFHHLTSLRELDLAGCGALTALPENI GKLSALEALYVGPCSAIQCLPESIKHLTNLRRLNISGCPNLVKRCEQEVGEDWQLVSH IPNLISD</aaseq>

Gene Sequence

<dnaseqindica>908..4369#ccacacggcttcaccggcgacgcgagctcggctccggcgactcgagcttgactctggcggcagtggcgggcggcgtggccttgcgatttggcggcgggtgcaggctggtttgatcgtcggcgtcagcgcgggctcgatttcaactgtgcaagctcgagatcgccggtgtagtgggctccacatcggccgcgcgcgggcgcgagcttggacttcggcggcactgctaacgtacagttcctaactcctaagatcaatttgttgctctctctttagtatgcctggtcaatttttcattttccatgaattttggggtaattcattttttttaaaaaaaaaagagaaaatttgggtaactagggtgagttcaaatataaaaaacatgatatgttgacctcttattctaattcacaatgtaagttaactttccgttattgattccagagtttcatactaattgttgcaacagtagtgctgctgccattgaattagtttggtctaaaactaaatgtagttgctccttttgcaattccattcacaggggttaggcaagatactttgaaatatgagtggaatggaagctgctgtagcatctgggctgttgaaggtcgcaggacacaagttagtttcactgataggcagcgagtttgctgccatagcgcgcgtggccgaagacctatctgagctccatggtatacatggtgaaattactagctggctgtccacagttcgtgatggatcaatagagtgtgatccacagttccgttgggtgattaaattgaaggatgttgcttatgatattgatgatctactccatgaagtccaactagaatatgagaaacacaagatacacagcaatggtgacaagcatgctatatttgacacgttacgtgaaaaaccaaagtgatttatgttccgtcgcaagatggcccgtaagatcaaggatatcaaggtgaaatataatgagattgtgcgacaaagaagggatgccaatactatacgcagtagtttacaagtggatcaacctattcctagcagtaacatgataatcggggagttgtccttgttgagtaatgttgaagaatcaaaaatacctatcagggaccaggagatggatacaattgtatctatgcttgtagactctaatgagggagagaattgttggatagtttccgttgttgggctaggcgggtccggcaaaactactctggccaaacacatttgccatgtcaacaagataaaggagctatttaaagagagaattttctgggtccatgtgtctagagagtttgatgtgcaaaagctcatcggcaagctatatgaaactatcgttggcagaaagtcagattgtcaaccccaacagcagatggtccgtgaaatttccaagcagttatgttgtaataagttccttcttgttcttgatgatgcttggcatacggatgggtatgagtggggacaattcatggtgcatctacaggataggtcaattggaagtaggattttgctaactactcgtgatcgaaaggttgcagaagtagtcaaatccaaacaaatacatgagttggtgttcttaacagagtctgagagttggagcttgttcctaaagtgttctgggtgggtggaggatgatttgggatcagaatttatacagcttggaaaagagattctgaagaaatgtggtggggtacctctagcaatcagaactattgcaggtgtcctctgtgaaaagagggagataagtacttggagagccataagagggagtgacttatggaacgttgggagtgtaaacgacagggtgtttgcatccttaaagttgagctacattcacctggcagataaactaaagcagtgctttacattctgctccatatttccaaaaggctatgtgatcaataaagacagattggttgcacaatggatagcccatggattcatcacgccgatgaaggaagagcagccaaaagatattgcaagtgaatattttgattctcttgtgaaagctggcttctttcttcaagatacgattgaagagtttggttacttgcacaagatgcatgacctgattcacgatcttgctcaatattgtgaaaagaatgaagtggtgacatctcgaccgaacagtatgtctacatatcagacacacaaatgcagatatttatctttgacatcaggaaatgagaaggtcaagaggggcttacttgacaaggttcatgctttatatatgtctgatggcaacctatcattcgataaaccagttaagaagagttgctatatccgcagtgtaattttggacaatgaaaactgtaccacttttccaccagtcttgttgaagtttgaatttcttggatatcttgaaatccatggagttgattgcaagaaacttcctgaagcaatctccggctgttggaacttgcagtcacttcattttattcggtgcagcggatttgtgatgttacctgagtctgttggcaaacttaagaagctaagaactttagagctaaattatgttattgatcttgagagtttgccgcagtccattggtgattgtcaaggtcttcaatccttgcaactacatagctgtaacaaacttcaaggcatgccgacttcgataggcagaattgagaacctaagggtgcttcatattacgtcgtgtccatgtatgcaaaaactaccgtcagagccctgtggggagtccaacaacctggagataatcaacttatctaattgccacaacttccatggcctgccaagcacatttgcctgcaaagcattgcgtactcttaatctttacaataccaagattaccatgttacctcaatgggtaacttcaatcgatactctagaatgtctagaccttggatattgccacgagctcatggaatttcctaaaggtatagcaaacttgagaaggcttgcagttttgaacttagagggttgcagtaaactacgttgcatgccatcaggtttcagacaactgactcgtttaacaaagatgggtttgtttgttgttggatgtgatggtgataatgcaaggatctcagagcttgaaacccttgatatgataagtggtaagatgaaaattatcaaccttaaatatacgctggatccaactgatgcagataaggccagcttgaagaggaagaacaacataaagtatctggagttggactggtctcgaggtgaaactgaaaaggagttagtaacagatatggtcatggagcaagacctggctgtgctgaacgctcttgaaccaccatcccgaattgaggaaatattaatatattattatggaggtccctgtttgccatggtggatgaagaagcaaactgattcttcttgctgggaaagcacaatgttaaagcaaaccaatccatgtcagcttatttatctaactagaatgacactacatgaaattccaaacttgaagcatatgcaaggacttgttgagttgcctttgctgaattaccttgaactatttggattgcctaatttggaggacatgtggaccacgacaggaggtgcagaaatcaggggtgatgaattgcaggcaaaatactgtttccctgccctgtccaccttatggataaggggctgtccgagattgaatgtggtgccctacttcccatcatctttggagagactttttttaagagaaagcaatgatcagctgctatcttcaggcagcttctcccatctccttcctccacttgcccatgaatcttctccttgcagcaatgcgcactcagcggtgccccgactgaaggaactaactataattaaaatgacaggatcatcgtgtggttgggatttcctgcagtaccttgatgcactagagtacttcaatatttttggcagcaatgacctaacacaattacctgagagcatgcgaagcctcacctccctccacaagctaatcatccacgactgtcccacctttggcatgctgccagaatggcttggagaactgtgttctttacagtccctgtttatcaaggggaccccaatgatggacagtctccctcaatcgattggctgccttacgtccctcacgcacttgactattgcatgcgataatttgaaacagctgcctgagacgtttcaccacctcacctcccttcgagaactcgacttggcaggatgtggtgccctgactgcactgccagaaaacatcgggaaactctctgcacttgaagcactatatgtcggaccgtgctctgccattcaatgcctgcccgagtccataaaacaccttactaatctccggcgattgaacatttctggttgccctaatttggtcaagcgttgcgagcaagaagtgggggaagactggcagcttgtctctcatattcctaatttaataagtgactaaggctctgagggcagcatccgacccttggtacgttctggagtacctgtcactgatttgctacatcagcttgtgtttgctaatgttctaaggtccctgctttatttttatgtatgagtattgagtttacagtagtctcttatactggtactaaaagcacttgtatgcttcgtatttcaagtttcaacacagtcttgcctgcctctcttccctagagtgtggttctacttgttcctcccaatataacatgtcctctacaatcgcactcctgttttcttctcgtaatgatagatttcatgccgatgctaataaactacgcttcttgcgtacaggttttcagattggagaaagtgataagaaggattggactgtcgaagactgtctgctgagtacatttcttcttctgctggaccattcagaaaatgcttccgtgcttcttttgtactgtatgctgatcatcttagatctataccgtttaaagagtgtggagactacaactttactctggatctcgtcttttgtacttctgtatattggtcatcttactctgctagagtctggtctcactacacgcgtttggttagcatgtgacatgtttttgctacttactcttgtggtttctgtgaggagtcacatttgatcgatcaattactcttgagcttcctggaagcggtggtgatcaagcttcttttcctgactaagcgatatcctaaactgtacaagggaaggatatatatatttgtagtctgctttactgc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0305600, RefSeq:Os05g0305600