Os05g0305700

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Revision as of 10:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0305700| Description = Homeodomain-like containing protein| Version = NM_001061685.1 GI:115463100 GeneID:4338365| Length = 5443 bp| Defini...")
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Gene Name

Os05g0305700

Description

Homeodomain-like containing protein

Version

NM_001061685.1 GI:115463100 GeneID:4338365

Length

5443 bp

Definition

Oryza sativa Japonica Group Os05g0305700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:13801022..13806464

Sequence Coding Region

13801395..13801497,13801912..13801973,13802516..13802598,13803065..13803179,13803496..13803555
,13804643..13804742,13806049..13806233

Expression

GEO Profiles:Os05g0305700

Genome Context

<gbrowseImage1> name=NC_008398:13801022..13806464 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:13801022..13806464 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggcgaacgccgaccccacgggggtgcttctgggcgggccccaccaccgcaacccttcccccgcgccggcgctggcccagccgccgggcgcgagcaccgcggcggcgctgcgccacgacccggggctctccgtccggtggacgcccgaggagcaggccgtgctcgaaggagggctggccagctatgcggcggatgcagctgtagttcgctatgcaaaaattgctatgaatctgcctgacaagacagtgcgagatgtggccctgcgttgcagatggatggctaaaaaggagagtaacaagaaaaggaaggaagagtcatctaagaaaaacaaagaaaagaaggagagagccaatgattcttcatcaaaagggccagctcacctagtggcccgacctaatgctgctccatattctcttccagttcttcccatggatgatgatgatgtgtcatacaaaacaattggaggccaaactggtcaaattcttgagcacaatgcacagatcttgaaccagatctataccaatatttcaaacatgcaggtgcaggagaacatccctcttttatgtcaaactagggataatatacttgcagtcctgaaggagataggcgatgttcctgagataatgaggcagatgccaccccttcctgtaaagttgaatgaagaactggctaactctatgttgccgaggcctccacatacatga</cdnaseq>

Protein Sequence

<aaseq>MGANADPTGVLLGGPHHRNPSPAPALAQPPGASTAAALRHDPGL SVRWTPEEQAVLEGGLASYAADAAVVRYAKIAMNLPDKTVRDVALRCRWMAKKESNKK RKEESSKKNKEKKERANDSSSKGPAHLVARPNAAPYSLPVLPMDDDDVSYKTIGGQTG QILEHNAQILNQIYTNISNMQVQENIPLLCQTRDNILAVLKEIGDVPEIMRQMPPLPV KLNEELANSMLPRPPHT</aaseq>

Gene Sequence

<dnaseqindica>4968..5070#4492..4553#3867..3949#3286..3400#2910..2969#1723..1822#232..416#attcgtttcccttctcccttcctcgctccccgtcccccgactcgccgccggccgcgccaccggagaatccaaaccctcgccgccgccgacgccgccgcccggccgcgcagagctctgattccgcggaatccctgcgcgccttcgcgagattccctcgggtttgggcgggaccgtcgtcccctggcctgagggggggttgccgagttggcggcggcggtggcaggcggcgagatgggggcgaacgccgaccccacgggggtgcttctgggcgggccccaccaccgcaacccttcccccgcgccggcgctggcccagccgccgggcgcgagcaccgcggcggcgctgcgccacgacccggggctctccgtccggtggacgcccgaggagcaggccgtgctcgaaggagggctggccaggtgagttttctagggtttctcttcccttcgtctaataactcgtagaaggaggattctctggaatagtccgttctttctactacttttgattgatagtctggttaggaggtggaagagcgttgtagatggcatcgatcttggggagttcttggatcgtgggtatggtggttttagtgattattttctaatctaccactgctcatctagaatggaattattttactacatgtttgctatagtttctccactttcccgtctaggatggaatatttacttgtttcctttactagtgaatgatagcaagttatccttgggtaggaatgtttgcatgcttccttatggggagtagttatgcttggctaggttatttttccccatcttctattcaatatctgcaaggttttttgttgtcattcatgagcaagtggttatagaaggttttctgtcctttatgataagagtataatttcgcagttgtagctgctgtcatataatctatctaggatgaaattccttttgtcgtagttgcaatggcgatgttactgttagggctcaggtcatgccagttgctgcatgacttgcgaacaggacaaggaaatggtaatgctcaagtgcttgtatagaaacggataactgccatcggttatggcgttggagtttggttggtaatttggaagcccaaatggaaattagtaccatgacttgtggaacacgcacattttctgcaaaatgtaggcatgcatttatcatgttgtttgttagggtttccttgctagatgaattcttaaatggcctgtagtaggatttcagttgtcgttttattactcagtgcagtggtggaggcttgtatttaatagagtaaattacagtttgcactcgttagatttttgtttttttttgagaacttgcaccgtttagattgacttacgtttcacaatgcactgacttaagcataaatttctactttacaccagggtaaacttaaatttagtttcacataacaccagtctatccgtttcgggtgggactgacggaccgtgggatattgtgcagccaccttgttctggttcgtagtgtgtatgtaacactatctgttctttgttgttctggcaataaatgtagtggcctcatgcacttggttaatgtccccatcattaccacaattgttgtacggaatctgaattcttgaattgtactatttttgttttgtcctcatttaagctagctcaaatcctccaatgtcctgcacttatatgtagcaacaattaagttaatcaatcttactttctgactacacctattgtagctatgcggcggatgcagctgtagttcgctatgcaaaaattgctatgaatctgcctgacaagacagtgcgagatgtggccctgcgttgcagatggatggctgtaagttggattctgatcacctgctgtacttctatatttgtttgctctttattttgctttagctcgttctatacaggaaagttgtggttatgataattgacagatgggtttatgtttcactgcttcagcttgtcttattaagtaatatatctagcgcatccgaatttcccacccaaaaattctataatacatcgttcttttatgtttatcaagcatcccatgccaatcaaccaatttgagataattcagtacctcatattattattttatcattctcattatgtttattagttgcttaattgtttaaatcaatcaagtaatttcactttgttttttgctatgcttagccaatggtttccggatggcctgttactagttccttgtgcaattactccctccgtcccagaatataaggatttttagggttggacacaggtattaagaaagtaggtagaattaaatgggagaaggttgtgattggttgagaagtggaggtaggtgagaaaattgaatggtggagggttgtgattggttgagaagagaatgttggtcaagaagttgttatattttgggataaaccttgagagctaaaagttattatattttgggacggagggagtatcaggtttatatagtgaatctaacatagatgctaggttctagcatctccattactaataccatattgagcaccacctacaactttcatcatgattactgttcttattattattatatcatgatcatgatcatgatcatcatcttttatcttcttcactagtgaatacgattaaatctacatccacactacatcaatgccaaaatcacatcatctgtttcaaaatcagtcggctttcagaaatgaatccttccaagtcatgcatcatagttgttttttattataaaaattaactgaagttgtaggcttgtaataaccatgcaaactgaccagtattgccatcaacagatagttatgtctagtgaattttgttttcaaacattctgatgtttcatattacatgcactatagttcttctgcctaacaaatattgttatataatctcatcaactttttcatctcttgcagaaaaaggagagtaacaagaaaaggaaggaagagtcatctaagaaaaacaaagaaaagaaggttaccatctggctcacttgtctactgattccctattttatcactattattgttcctgatttggcaagctattgatttcatgaaagcggtaaccgacattctttctttctagtgaagttttaaaaggcagattactagcttttaagtgttttagcaacctagaaggtggcacatgcaaagtcagtgtttcacatatgtaaaaatgcataggtgtttggatgtaaatatgtaaaaatgaatagatgttttaaaagaagcatcattgtttttaaatttcttgcatgattaaaatgtatatttttttactaacctgtaggagagagccaatgattcttcatcaaaagggccagctcacctagtggcccgacctaatgctgctccatattctcttccagttcttcccatggatgatgatgatgtgtcatacaaaagtaagtgttttgttagtactagcactcatattttgtactttcttgtctcatttgtttgcttttattttttcttgatattatggttccaggcatgtggctatttaatcctttgttccttctttatttttttctcttcgaccttgttgatgctgctttattatgtaaaatatatattattgaacttatttgtaatttgtccaaacctgaagttttccagagcatgtatgaaaatttaaaatagagtaaatagtagaacatgatgcttgcaaatatttatactgtatgatgttatcctgtttgtgatccagtagtagagtactatttacttttaaatataataggaataggaagttgcatgctgtaactttagaagcatcttcattaatataacaattatcactatgttgagattttaagcgttgaattaagatattatatttgatcagtgctttccatgtcattgcagcaattggaggccaaactggtcaaattcttgagcacaatgcacagatcttgaaccagatctataccaatatttcaaacatgcaggtacttctagttctatcttctctgttattttttcagcactcagccccagcatgataagattatatgaataatattttggctattatgatctacattggctgtggtttacattgcattgtcgctgaagatatagtgttgcaattagtttcttatgcattgtcgctgaagatgtagtgttgcaattagtttcttaagttgcccgtaaatcacgcatggacaagcattctatcaataattgcaaggttctagaagaatttcacttggtaatagaaccacgggtccaggaaacccataatgcaatttccattgaactgtaggtgttttactttattagtacccatttcatgatggttatatacttgtacgttggggaaaggagcagccatttgaatgtatgctatattaaaagaatgtattccaaatatttttcttccgaaatttgtatgattgttttgtttcacaaaggtatgactgatacctgtcacattcacctgatatttgctatgctgtcaatattctaataatgattgcatttattgtaggtgcaggagaacatccctcttttatgtcaaactagggataatatacttgcagtcctgaaggagtaagattctctactttgctttttgtacaatcttgaataactcgggatttgagtaccagatttgtcttcccatgattgtttatctggctcttatgttttttttttctctcattcctgagtcttctaaagtaaattcatttcttctccacttcagattgtaccccaagtagtccccttactttggaatctaagtttctaactggcctaaattctatatcaataagttgcaatgtcattttagtcccctccttgttatatcaatgcttttctgctacattttaataaccgaacactttcttccatgtgatcttgaaatacagatgttatttattgattaagttagttgctgttgtttcatcacttgtcctgtgaaactgcaattatgtaacaacaatttcttcaattttatagcaggataggcgatgttcctgagataatgaggcagatgccaccccttcctgtaaagttgaatgaagaactggctaactctatgttgccgaggcctccacatacatgatatgtgcaacagtttgctcaaccaaatcaattgtgcatgaagatcagtttagatagatgggttatttgcatatgctttgtcgctatagattccagatgtctgattgtgctgtccagatcttaaatccagccatgtaacaattctataccttggttctatttgttcagctgatagtaggtgctccgtgtacaaagccagcagtttcagtgaaacaagttcgtagccctctagtccttgtagaaaaaaaacataggggttaacttctgtacagtgtcgaaagaaatagcatcttttctgtttcagttatgtttagaactggcattcagcccaatcttacatgttcggacatgatataatacaagcaaaacttctt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0305700, RefSeq:Os05g0305700