Os05g0578600
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os05g0578600 |
|---|---|
| Description |
Similar to Polygalacturonase PG2 |
| Version |
NM_001062949.1 GI:115465628 GeneID:4339708 |
| Length |
1933 bp |
| Definition |
Oryza sativa Japonica Group Os05g0578600, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:28883858..28885790 |
| Sequence Coding Region |
28884063..28884458,28884545..28884735,28885259..28885466,28885559..28885600,28885688..28885789 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:28883858..28885790 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:28883858..28885790 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>agtggaatatcaattcaaggaagtggtgtcataaatggtagggggcaagaatggtggacctattcagatccaaatgacgacgacaatgatgatgttgatgcttacaatgtggagctggagaagatgccacagattaaacctacagcattgaggttttatggtagttccaatgtcacagtaactggtatcaccattgttaacagctcacagtgccatctcaagtttgatagctgtcaaggagtaatggttcatgacctgaccatctcatcgcctgagaacagtcccaacactgatggaatacacctgcaaaattccaaacaagtcagcattcaccactctaacctcgcttgcggcgatgattgtgtttccatccagacaggctgcagtgacataaacatacataatgtgaactgtggaccagggcatgggatcagcattggtggtctaggaaggtacaacacaaaagcatgtgtatccaatgtcaccgtaagagatgtcaacatgttcaaaacaatgactggtgtcagaatcaaaacttggcagggaggttcagggttggttcaaggcataaggttctcaaacatacaagtgtcagaagttcaaacacctatcataatagaccaattttactgtgacagaacaacttgcagaaaccaaacatcagcagtggcggttttaggtgttcagtacgagaatatcagggggaccttcacaatcaagcctgcccattttgcatgcagtgatagctcgccttgttcagagatcactcttactggaatacagctcaaacccctgatagtgccacagtatcacctgtacaacccattctgctggcaagcctttggagagttgtccacccccaccatccctcccatatcctgcttgcagatcggcaaaccatctgggaacaacgtgatgtcagattatgatctatgttga</cdnaseq> |
| Protein Sequence |
<aaseq>SGISIQGSGVINGRGQEWWTYSDPNDDDNDDVDAYNVELEKMPQ IKPTALRFYGSSNVTVTGITIVNSSQCHLKFDSCQGVMVHDLTISSPENSPNTDGIHL QNSKQVSIHHSNLACGDDCVSIQTGCSDINIHNVNCGPGHGISIGGLGRYNTKACVSN VTVRDVNMFKTMTGVRIKTWQGGSGLVQGIRFSNIQVSEVQTPIIIDQFYCDRTTCRN QTSAVAVLGVQYENIRGTFTIKPAHFACSDSSPCSEITLTGIQLKPLIVPQYHLYNPF CWQAFGELSTPTIPPISCLQIGKPSGNNVMSDYDLC</aaseq> |
| Gene Sequence |
<dnaseqindica>1333..1728#1056..1246#325..532#191..232#2..103#tagtggaatatcaattcaaggaagtggtgtcataaatggtagggggcaagaatggtggacctattcagatccaaatgacgacgacaatgatgatgttgatgctgtaaggcctgatcatctataacaatcacacttatagcaagtcaaaagtagacaaatttaattgcttaccttgaatgctttccaacagtacaatgtggagctggagaagatgccacagattaaacctacagtaagcaaaatttggttgcatttgtatacttgaacatattggtaactgcctactggaacaaattaaaacagtggttacatacattgatgcaggcattgaggttttatggtagttccaatgtcacagtaactggtatcaccattgttaacagctcacagtgccatctcaagtttgatagctgtcaaggagtaatggttcatgacctgaccatctcatcgcctgagaacagtcccaacactgatggaatacacctgcaaaattccaaacaagtcagcattcaccactctaacctcgcttgcggtaatgctctcattaactcaatcaaagcagtaagccagtatagtttcaaatgtgatatgttagataggaatatagtgctgcattctcgatttattttttttcaaaaaaaaaggttttgccaaaataaagaaagaaggtgctgattgatttgatggcaatagctgcaaactttcgcccccaccaaattttgatggcactaaccagaaacgacaagcattgggcttcataatattgacaaaattccattccaatttggctccataaatcatttcttgataatttggcattgtttggtcaagctgttaccaaattttggcaaggcttggtggggagaaatcggcatcaaacagaaacatacaaagtctaccaattaattactttaggtaacatatagaataaataaactacatgccaattgatctgttcagtgctcacttgtagaaaccgacaggattcaggactaagggaaagctaaaaacactagtacaagtatctgaagtaatatttgctctctgtgatgcaggcgatgattgtgtttccatccagacaggctgcagtgacataaacatacataatgtgaactgtggaccagggcatgggatcagcattggtggtctaggaaggtacaacacaaaagcatgtgtatccaatgtcaccgtaagagatgtcaacatgttcaaaacaatgactggtgtcagaatcaaaacttggcaggtaagcataatctggtagatgatgtgactagtccaacaatgaccaccatatacacagagctaaaaaacactgacattcctatgcagggaggttcagggttggttcaaggcataaggttctcaaacatacaagtgtcagaagttcaaacacctatcataatagaccaattttactgtgacagaacaacttgcagaaaccaaacatcagcagtggcggttttaggtgttcagtacgagaatatcagggggaccttcacaatcaagcctgcccattttgcatgcagtgatagctcgccttgttcagagatcactcttactggaatacagctcaaacccctgatagtgccacagtatcacctgtacaacccattctgctggcaagcctttggagagttgtccacccccaccatccctcccatatcctgcttgcagatcggcaaaccatctgggaacaacgtgatgtcagattatgatctatgttgaaactctctgaatgagtggaaatgctgtgatccaggaaatactatactcctggtcctcattggttagggtggtcgtcgtgattcttccgaccccctttctgcacaatcatcgtgtggtgtatatatatacagtttatgcaaggatagtatatggttatcaggacatgtaccagcttccctcttgaagtgaaatgtaggaatttgat</dnaseqindica> |
| External Link(s) |
