Os05g0585800

From RiceWiki
Revision as of 20:15, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0585800

Description

Protein of unknown function DUF1221 domain containing protein

Version

NM_001062993.1 GI:115465716 GeneID:4339754

Length

2264 bp

Definition

Oryza sativa Japonica Group Os05g0585800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29236205..29238468

Sequence Coding Region

29236264..29238363

Expression

GEO Profiles:Os05g0585800

Genome Context

<gbrowseImage1> name=NC_008398:29236205..29238468 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:29236205..29238468 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcagctccggcaggtcggcgaggccatcggcggcgtcaacgccctcatggccttccacgacgacctccgctgcatcaaccctcgccaatgcgccctcctcgcccacgcctacgccctcgccttccgcgccgtcgccggcgagctccgcgcccgcctccgcttccacgaccgcctcaccaaatggaagcccctcgacgatcccctccgcgagctccaccgcgtcgtccgcgacggcgaggcctacatccgccactgcctcctcctcgacccggcccactggtgggcgcgcgccgccgccgccacgcacggcacggaatgcgtcgagcaccacctccacaacctcctttggtgcgtctccgtcgtcgtcgaggcggtcgagaacgtcggcgaggtcaccggctccgaccccgacgagctcgcccggcggcggctggcgctggccagggactacgacaaggacctgctcgatccaaagctcttccgggagaggctcggcgagacgttcctcgccacgcgtgagctcgccgcccggatggacatggcgtggaaggaggacaggtggctgctgtcccagcttctcgacgagaggaagggcccgacatcgtcgccggagccgccattgacgcggcaggagcaccggctcgccgacctcctcgccgcgccgcgcgggaagctgcacccggcgagcgtgctcctgatgagcgacttccacatgcggaggcgcctcggggggaacgggaacctcaaggaggtgcagtggttgggggaggcgttcgctgtgaagcacgtcgtcggcgtcgacgccgaggcggcggccgcggaggtggcggcgctggcgtcggtgtcgccgcacccgaacgtggcgcactgccgctactgcttccacgacgaggagaagagggagctgtacatggtgatggaccagctgatgagcaaggacctcggcagctacgtcaaggaggtgaactccgccaagcgccgggcgccgctcccgctcgtcgtcgtcgtcgacaccatgctgcagatcgcgtgcggcatggcgcacctgcactccaacaagatgtaccacggcaacctcaacccatccaacgtgatcgtcaagccgcgccatggcgacgcctacctgcatgtcaaggtcgccggcttcgtctccggctccggcacggcgaacgcggccaacccatgcatctggtgcgcgccggaggtggtggggaacgaggcggcggcgacggagaagggcgacgtgtacagcttcgggatgatctgcttcgagctgatcaccgggaagatcccgttcgaggacaaccacctgcagggggagaacatgagcaagaacatccgcgccggcgagcggccgctgttcccgttccagtcgcccaagtacctgaccagcctgacgcggcggtgctggcacggcgaggcggcgcagcggccgccgttccactccatctgccgcgtgctccgctacgtgaagcgcttcctggtgatgaataacccggagcaggcggcggcggacgcggctggagccgggccggcggtggactacctggacatggaggcgcagctgctgaggaggttcccggagtgggaggggaacggtgtcgccgacgtgccgttcgagatgtacgcgtacagggtgatggagagggacaagatgagcaacgcgtgcagggacaggagctccgactccggcagcgacggcaactcgctgtggggagatgacagcgccagcggcgggtccagcacgacggcgacggacgcgtcggcgtcgagccggccgctgcttgaccggagcggcagcacgaggtcgtcgccgccgcgcaaggtggccatcgccgccgccaaggcaggcaagtgtcgcagcggcattgttactcgtctaaagccttcctccaagattacagctagctccatgtccgtgacgtgtgcagggccgccgcagaagtcgaggtcgatgggcacggtgaggccgccgccggtcgtggcccgccgaacgccgaggattaagtccgacggccacctcaatagggcggcaattccgcctacccgacggcgtaaatccggcgggaacgcttcagactcggagttagcttag</cdnaseq>

Protein Sequence

<aaseq>MEQLRQVGEAIGGVNALMAFHDDLRCINPRQCALLAHAYALAFR AVAGELRARLRFHDRLTKWKPLDDPLRELHRVVRDGEAYIRHCLLLDPAHWWARAAAA THGTECVEHHLHNLLWCVSVVVEAVENVGEVTGSDPDELARRRLALARDYDKDLLDPK LFRERLGETFLATRELAARMDMAWKEDRWLLSQLLDERKGPTSSPEPPLTRQEHRLAD LLAAPRGKLHPASVLLMSDFHMRRRLGGNGNLKEVQWLGEAFAVKHVVGVDAEAAAAE VAALASVSPHPNVAHCRYCFHDEEKRELYMVMDQLMSKDLGSYVKEVNSAKRRAPLPL VVVVDTMLQIACGMAHLHSNKMYHGNLNPSNVIVKPRHGDAYLHVKVAGFVSGSGTAN AANPCIWCAPEVVGNEAAATEKGDVYSFGMICFELITGKIPFEDNHLQGENMSKNIRA GERPLFPFQSPKYLTSLTRRCWHGEAAQRPPFHSICRVLRYVKRFLVMNNPEQAAADA AGAGPAVDYLDMEAQLLRRFPEWEGNGVADVPFEMYAYRVMERDKMSNACRDRSSDSG SDGNSLWGDDSASGGSSTTATDASASSRPLLDRSGSTRSSPPRKVAIAAAKAGKCRSG IVTRLKPSSKITASSMSVTCAGPPQKSRSMGTVRPPPVVARRTPRIKSDGHLNRAAIP PTRRRKSGGNASDSELA</aaseq>

Gene Sequence

<dnaseqindica>60..2159#aaattaatatccatatccatagatagatagaagaagaatcgaggaggagaaggaggaggatggagcagctccggcaggtcggcgaggccatcggcggcgtcaacgccctcatggccttccacgacgacctccgctgcatcaaccctcgccaatgcgccctcctcgcccacgcctacgccctcgccttccgcgccgtcgccggcgagctccgcgcccgcctccgcttccacgaccgcctcaccaaatggaagcccctcgacgatcccctccgcgagctccaccgcgtcgtccgcgacggcgaggcctacatccgccactgcctcctcctcgacccggcccactggtgggcgcgcgccgccgccgccacgcacggcacggaatgcgtcgagcaccacctccacaacctcctttggtgcgtctccgtcgtcgtcgaggcggtcgagaacgtcggcgaggtcaccggctccgaccccgacgagctcgcccggcggcggctggcgctggccagggactacgacaaggacctgctcgatccaaagctcttccgggagaggctcggcgagacgttcctcgccacgcgtgagctcgccgcccggatggacatggcgtggaaggaggacaggtggctgctgtcccagcttctcgacgagaggaagggcccgacatcgtcgccggagccgccattgacgcggcaggagcaccggctcgccgacctcctcgccgcgccgcgcgggaagctgcacccggcgagcgtgctcctgatgagcgacttccacatgcggaggcgcctcggggggaacgggaacctcaaggaggtgcagtggttgggggaggcgttcgctgtgaagcacgtcgtcggcgtcgacgccgaggcggcggccgcggaggtggcggcgctggcgtcggtgtcgccgcacccgaacgtggcgcactgccgctactgcttccacgacgaggagaagagggagctgtacatggtgatggaccagctgatgagcaaggacctcggcagctacgtcaaggaggtgaactccgccaagcgccgggcgccgctcccgctcgtcgtcgtcgtcgacaccatgctgcagatcgcgtgcggcatggcgcacctgcactccaacaagatgtaccacggcaacctcaacccatccaacgtgatcgtcaagccgcgccatggcgacgcctacctgcatgtcaaggtcgccggcttcgtctccggctccggcacggcgaacgcggccaacccatgcatctggtgcgcgccggaggtggtggggaacgaggcggcggcgacggagaagggcgacgtgtacagcttcgggatgatctgcttcgagctgatcaccgggaagatcccgttcgaggacaaccacctgcagggggagaacatgagcaagaacatccgcgccggcgagcggccgctgttcccgttccagtcgcccaagtacctgaccagcctgacgcggcggtgctggcacggcgaggcggcgcagcggccgccgttccactccatctgccgcgtgctccgctacgtgaagcgcttcctggtgatgaataacccggagcaggcggcggcggacgcggctggagccgggccggcggtggactacctggacatggaggcgcagctgctgaggaggttcccggagtgggaggggaacggtgtcgccgacgtgccgttcgagatgtacgcgtacagggtgatggagagggacaagatgagcaacgcgtgcagggacaggagctccgactccggcagcgacggcaactcgctgtggggagatgacagcgccagcggcgggtccagcacgacggcgacggacgcgtcggcgtcgagccggccgctgcttgaccggagcggcagcacgaggtcgtcgccgccgcgcaaggtggccatcgccgccgccaaggcaggcaagtgtcgcagcggcattgttactcgtctaaagccttcctccaagattacagctagctccatgtccgtgacgtgtgcagggccgccgcagaagtcgaggtcgatgggcacggtgaggccgccgccggtcgtggcccgccgaacgccgaggattaagtccgacggccacctcaatagggcggcaattccgcctacccgacggcgtaaatccggcgggaacgcttcagactcggagttagcttagcaaaatgttgggtagccttctttctcatatgatgagaggttttcacttgtttcagaaatacagtatcaaaacgtcaacaatgaaaaaaatttcactcttgtaaat</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0585800, RefSeq:Os05g0585800