Os05g0587000
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os05g0587000 |
|---|---|
| Description |
Virulence factor, pectin lyase fold family protein |
| Version |
NM_001063001.1 GI:115465732 GeneID:4339762 |
| Length |
2005 bp |
| Definition |
Oryza sativa Japonica Group Os05g0587000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:29321937..29323941 |
| Sequence Coding Region |
29321937..29322565,29322652..29322722,29322925..29323099,29323356..29323476,29323591..29323941 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:29321937..29323941 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:29321937..29323941 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggtggcgtcgctgcgcctctccctcgccgcggcggcggcggcggcgctggcggtggcggtggcgctgctgttgccaccgctggccgcggcgcagggggagacgacgtgcccggcggacgtgccgccgcgcggcgcgtggatgtccgtggcgagcttcggcggcgtcggcgacgggcgggcgctcaacacggcggcgttcgcgcgcgccgtggcgcgcatcgagcggcggcgcgcgcggggcggcgcgctgctgtacgtgccggccggggtgtggctgacggggcccttcaacctcacctcccacatgacgctcttcctcgcccgcggcgccgtcatccgcgccacacaggacacatcgagctggccgttgatagacccgttgccatcgtacgggagaggacgcgagctgccaggaggaagatacatgagcttgatccatggtgatggcctccaggatgtgttcattacaggtgagaatggaacaattgatgggcaaggcagcgtgtggtgggatatgtggaggaagcgaacactgcccttcacaagaccacatctattggagctaatatcctccactgatgtgatcatctccaatgtcgtcttccaggattcgccattttggaacatccatccggtgtattgcagcaatgtagtaattacgaacgtaaccgtgttggctccacatgactccccaaataccgatggaattgatccagattcaagcagcaatgtctgcattgaggattcctacatttcgacaggagatgacttgatctccatcaagagtggctgggatgagtatggcatagcctttgggcgacccagctccggcatcacgatcagacgtataacaggatcaggaccatttgcaggctttgcagtgggaagtgaaacctccggtggtgtggagaatgtccatgtagagcacctgaatttcttcggcatgggtgtcggaatccatgtcaagaccaactccggaaggggaggattcatccgaaacatcacggtctcagaagtgaccctcaatggagctcgatacggtttgcgaatcgccggagatgttggagggcatcctgatgcatcatatgatccgagcaagcttcctgtcgtcgacggcgtgacgataaaaaatgtctggggtcagaacatccggcaagccgggctggtaaggggtatcagggactcggttttcagtcggatttgcctctcaaatgttaagctctatggtggtgattctgttggtccatggaaatgccgagctgtcagcggtggcgctcttgatgtgcagccatcgccgtgcgcagagctgacaagtacatctgagatgagcttttgtacaaattag</cdnaseq> |
| Protein Sequence |
<aaseq>MVASLRLSLAAAAAAALAVAVALLLPPLAAAQGETTCPADVPPR GAWMSVASFGGVGDGRALNTAAFARAVARIERRRARGGALLYVPAGVWLTGPFNLTSH MTLFLARGAVIRATQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHGDGLQDVFITGEN GTIDGQGSVWWDMWRKRTLPFTRPHLLELISSTDVIISNVVFQDSPFWNIHPVYCSNV VITNVTVLAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLISIKSGWDEYGIAFGRPS SGITIRRITGSGPFAGFAVGSETSGGVENVHVEHLNFFGMGVGIHVKTNSGRGGFIRN ITVSEVTLNGARYGLRIAGDVGGHPDASYDPSKLPVVDGVTIKNVWGQNIRQAGLVRG IRDSVFSRICLSNVKLYGGDSVGPWKCRAVSGGALDVQPSPCAELTSTSEMSFCTN</aaseq> |
| Gene Sequence |
<dnaseqindica>1377..2005#1220..1290#843..1017#466..586#1..351#atggtggcgtcgctgcgcctctccctcgccgcggcggcggcggcggcgctggcggtggcggtggcgctgctgttgccaccgctggccgcggcgcagggggagacgacgtgcccggcggacgtgccgccgcgcggcgcgtggatgtccgtggcgagcttcggcggcgtcggcgacgggcgggcgctcaacacggcggcgttcgcgcgcgccgtggcgcgcatcgagcggcggcgcgcgcggggcggcgcgctgctgtacgtgccggccggggtgtggctgacggggcccttcaacctcacctcccacatgacgctcttcctcgcccgcggcgccgtcatccgcgccacacaggtacaggcacagcacagacgacagctcagctgctaggccatcgccatggccatgtccttcttttacctccaagacctctcatcttcatcttgtcgagcatttgtactggatcaggacacatcgagctggccgttgatagacccgttgccatcgtacgggagaggacgcgagctgccaggaggaagatacatgagcttgatccatggtgatggcctccaggatgtgttcattacaggttctaattctctctacatgatgacacctcacttcttgtcagttgtcaccttgtcctcaagttactgtttcactgcaatacgtgtactacacatggcccagttaacttgcagtcggcaaaataaatcagacctgcaattttaaaaagttcacattttctttgtttgtttagacttctgaagcaagatgatgagaatgccatcgaacttttgtgtcgttgggatgttcaagattccgtctttctgtgacctgtgcaggtgagaatggaacaattgatgggcaaggcagcgtgtggtgggatatgtggaggaagcgaacactgcccttcacaagaccacatctattggagctaatatcctccactgatgtgatcatctccaatgtcgtcttccaggattcgccattttggaacatccatccggtgtattgcaggtgaacacaaacagatcactttgttatacttcagagcctacactccaggcattattgtgaactccattgctcacatatggcttttggacactccgttcaattagcatattgtgcttctgcagcaatgtagatccactttgatggatgtagaggctgggttttaatccattatctaaaaaattagcatattgtgcttctgcagcaatgtagtaattacgaacgtaaccgtgttggctccacatgactccccaaataccgatggaattgatccaggtacaagagttgtttcactttgtaaatctgtgcgcaaaattccctatgcctattctgaatcaagatcttggactcaaacactgcagattcaagcagcaatgtctgcattgaggattcctacatttcgacaggagatgacttgatctccatcaagagtggctgggatgagtatggcatagcctttgggcgacccagctccggcatcacgatcagacgtataacaggatcaggaccatttgcaggctttgcagtgggaagtgaaacctccggtggtgtggagaatgtccatgtagagcacctgaatttcttcggcatgggtgtcggaatccatgtcaagaccaactccggaaggggaggattcatccgaaacatcacggtctcagaagtgaccctcaatggagctcgatacggtttgcgaatcgccggagatgttggagggcatcctgatgcatcatatgatccgagcaagcttcctgtcgtcgacggcgtgacgataaaaaatgtctggggtcagaacatccggcaagccgggctggtaaggggtatcagggactcggttttcagtcggatttgcctctcaaatgttaagctctatggtggtgattctgttggtccatggaaatgccgagctgtcagcggtggcgctcttgatgtgcagccatcgccgtgcgcagagctgacaagtacatctgagatgagcttttgtacaaattag</dnaseqindica> |
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