Os05g0591300

From RiceWiki
Revision as of 20:15, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0591300

Description

Similar to DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid- encoded RNA polymerase beta subunit) (RNA polymerase beta subunit)

Version

NM_001063023.1 GI:115465776 GeneID:4339787

Length

1362 bp

Definition

Oryza sativa Japonica Group Os05g0591300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29530769..29532130

Sequence Coding Region

29530769..29532130

Expression

GEO Profiles:Os05g0591300

Genome Context

<gbrowseImage1> name=NC_008398:29530769..29532130 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:29530769..29532130 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcccttgagtttccggtgttccatagaaaccatccatgcgcccaatctgtccttgggccaacagcagcagcagcagcaggaggaggaggaggaggaggaggaggagacgtcaatcagtgtgactaaagattcaaagctgaacgactttgccttcttaataccggtgaaactgggcacgccagccgtccagtacctggtgaccatggacaccggatcaagcctttcatgggttcagtgccggccgtgtaccatcaagtgccatgttcaaccggcgaaagtcgggcccatcttcgaccccagcaactccagcacgttccggcatgttggctgttcaacctctatctgcagctatcttggtcgcaccctcagaatccagtccaaggcttgcatggagtgggaagacatctgcctctataccatgtcttatggaggtgggtgggcttactctgttggcaaggcggtgacagacaggcttgttcttggtggtggagaaacgacgaggacgacattaagcctagccaatttcgtgttcggttgcagcatggacacccagtacagtacccataaggaggctggtatctttgggttgggtacaagcaactactccttcgaacaaatagcacctctgctgagttacaaggcgttcagctactgtcttcccagtgatgaggcacaccaagggtatctatcaattggaccagacagcagcggtggtgtccctacctccatgttcccaggaacccctaggccagtgtattcgatagggatgaccggcctcactgtcactgtcaatggcgaggtccgctcgttggtctccggctccggctccagccccagcccctcctcactgatggtcgtcgactctggggcgaaattgaccttactgttggcctccaccttcggtcaactagaggatgcaatcatcccagcaatggagtctcttggctattcactcaacactgctgccggccaaaaccagctttgctttctcaccgagagtgacagacaaaactacctccagcgcaaacctccacctcccagcaattggtcagctttacctgtgtttcacatctcctttaccctcggtctcacgctgacattgcctcccaagaatgcattttacctcgatgctagataccgtcaagaattcctgactattgcatggaaacagatttatgttagaagtatttttcctttccaatatttttctgacattcttggactgtgctcctcctttgctcgcgacgactacttggagtctggttatcagatattggggaacttggtcacaaaatcgtgtggaatcacttatgacatcccgcgcaaacaatttcggtttcgtaccggcgagtgctag</cdnaseq>

Protein Sequence

<aaseq>MAPLSFRCSIETIHAPNLSLGQQQQQQQEEEEEEEEETSISVTK DSKLNDFAFLIPVKLGTPAVQYLVTMDTGSSLSWVQCRPCTIKCHVQPAKVGPIFDPS NSSTFRHVGCSTSICSYLGRTLRIQSKACMEWEDICLYTMSYGGGWAYSVGKAVTDRL VLGGGETTRTTLSLANFVFGCSMDTQYSTHKEAGIFGLGTSNYSFEQIAPLLSYKAFS YCLPSDEAHQGYLSIGPDSSGGVPTSMFPGTPRPVYSIGMTGLTVTVNGEVRSLVSGS GSSPSPSSLMVVDSGAKLTLLLASTFGQLEDAIIPAMESLGYSLNTAAGQNQLCFLTE SDRQNYLQRKPPPPSNWSALPVFHISFTLGLTLTLPPKNAFYLDARYRQEFLTIAWKQ IYVRSIFPFQYFSDILGLCSSFARDDYLESGYQILGNLVTKSCGITYDIPRKQFRFRT GEC</aaseq>

Gene Sequence

<dnaseqindica>1..1362#atggcgcccttgagtttccggtgttccatagaaaccatccatgcgcccaatctgtccttgggccaacagcagcagcagcagcaggaggaggaggaggaggaggaggaggagacgtcaatcagtgtgactaaagattcaaagctgaacgactttgccttcttaataccggtgaaactgggcacgccagccgtccagtacctggtgaccatggacaccggatcaagcctttcatgggttcagtgccggccgtgtaccatcaagtgccatgttcaaccggcgaaagtcgggcccatcttcgaccccagcaactccagcacgttccggcatgttggctgttcaacctctatctgcagctatcttggtcgcaccctcagaatccagtccaaggcttgcatggagtgggaagacatctgcctctataccatgtcttatggaggtgggtgggcttactctgttggcaaggcggtgacagacaggcttgttcttggtggtggagaaacgacgaggacgacattaagcctagccaatttcgtgttcggttgcagcatggacacccagtacagtacccataaggaggctggtatctttgggttgggtacaagcaactactccttcgaacaaatagcacctctgctgagttacaaggcgttcagctactgtcttcccagtgatgaggcacaccaagggtatctatcaattggaccagacagcagcggtggtgtccctacctccatgttcccaggaacccctaggccagtgtattcgatagggatgaccggcctcactgtcactgtcaatggcgaggtccgctcgttggtctccggctccggctccagccccagcccctcctcactgatggtcgtcgactctggggcgaaattgaccttactgttggcctccaccttcggtcaactagaggatgcaatcatcccagcaatggagtctcttggctattcactcaacactgctgccggccaaaaccagctttgctttctcaccgagagtgacagacaaaactacctccagcgcaaacctccacctcccagcaattggtcagctttacctgtgtttcacatctcctttaccctcggtctcacgctgacattgcctcccaagaatgcattttacctcgatgctagataccgtcaagaattcctgactattgcatggaaacagatttatgttagaagtatttttcctttccaatatttttctgacattcttggactgtgctcctcctttgctcgcgacgactacttggagtctggttatcagatattggggaacttggtcacaaaatcgtgtggaatcacttatgacatcccgcgcaaacaatttcggtttcgtaccggcgagtgctag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0591300, RefSeq:Os05g0591300