Os05g0312500

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Revision as of 10:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0312500| Description = Reticulon family protein| Version = NM_001061699.1 GI:115463128 GeneID:4338381| Length = 3380 bp| Definition = Oryz...")
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Gene Name

Os05g0312500

Description

Reticulon family protein

Version

NM_001061699.1 GI:115463128 GeneID:4338381

Length

3380 bp

Definition

Oryza sativa Japonica Group Os05g0312500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:14333895..14337274

Sequence Coding Region

14334280..14334443,14335286..14335355,14335439..14335580,14336126..14336306,14336728..14336926

Expression

GEO Profiles:Os05g0312500

Genome Context

<gbrowseImage1> name=NC_008398:14333895..14337274 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:14333895..14337274 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgtccgaaggcgaggagcacgggtcgctgctggagaagatcaacgacaagatccatgagttcaagaagggatcgtcgtcatcctcgtcctcggactccgacgacgacaagaagcaccaccacaagtccaagtccaagaagaagcggctcttcggccggacgaacccgctacatcacgtcctaggaggaggcaaagctgctgatcttgtgctgtggagggacaagcagacgtcagggagcatcctggcgggagtgaccgtgatctggttgctgttcgaggggatcggctaccacctcctcaccttcttctgccactcgctcatggtcttcctcaccgtctgcttcgtctgggccaatgccgcctccttcatcaacaggggtcctccaaagttcccagatgcaattctgtctgaagtccaatgcctgaagattgctcatattctgaggaaagaaatcaatgaggccttcttaacattacgccatgtcgcctccggaaaagacctcaaaacatatcttatgacagttgcaggcctctggttcgtttctataattgggagctgcttcagcttcttgactttgtcttacaccattttcctgatggcatacacactgccaatgctgtatgagaaatacgaagatgaagtcgatgtcgtgggcgagaaggccctaatcgagctcaagaagcaatatgcagtgcttgatcacaagcttctctcaaagatcccaatgttagctgagaagaaacagcactaa</cdnaseq>

Protein Sequence

<aaseq>MMSEGEEHGSLLEKINDKIHEFKKGSSSSSSSDSDDDKKHHHKS KSKKKRLFGRTNPLHHVLGGGKAADLVLWRDKQTSGSILAGVTVIWLLFEGIGYHLLT FFCHSLMVFLTVCFVWANAASFINRGPPKFPDAILSEVQCLKIAHILRKEINEAFLTL RHVASGKDLKTYLMTVAGLWFVSIIGSCFSFLTLSYTIFLMAYTLPMLYEKYEDEVDV VGEKALIELKKQYAVLDHKLLSKIPMLAEKKQH</aaseq>

Gene Sequence

<dnaseqindica>2832..2995#1920..1989#1695..1836#969..1149#349..547#acatagagagacatgagaggtgaacaaaaccccccagaataaacacaggctttccttcgtttcaaggaagaacacacacagagatagaggtgaagagcgagagagggtaataaaccgttgtgtctcactgtaagtgtccatgatctttgaccattgcgttgttgataatttctttgtgaatgcaatgcaacacctggcgttggatttagacaaattgtattgttcttcttctgttgttgttgttgttttttctctgaagaataaattaacgtgtgtggaaaaagatttcagtcctcgatttgatgtttcgtttgccattgtgtaccaaatcaaatcaggggggagggaatgatgtccgaaggcgaggagcacgggtcgctgctggagaagatcaacgacaagatccatgagttcaagaagggatcgtcgtcatcctcgtcctcggactccgacgacgacaagaagcaccaccacaagtccaagtccaagaagaagcggctcttcggccggacgaacccgctacatcacgtcctaggaggaggcaaaggtacatacatatacatctctagcctgaaaatgcttgtttctctgatgattcggaatccgatcggttaatgaacaaattctacttaaattggatggatgttttgaacatttccagcgtaagaatcgatcctggaatgtctgaattttcttttctaagttcatcgccgtttcatatttttttatagaaggatattttttacccaggcccggctctacatctaactaaatatatgcactatttttaaattggaaacttagcctcttaaacaatccaatctaaaattcgctcctatagtggaaatttcgagtcttttcaaattaggaacttagttcctcagataacccaatctaaaattcgtgcaaccactaaactatatgcgcttttgctcgtggccgtttgatgtgtaatcttctctcttcagctgctgatcttgtgctgtggagggacaagcagacgtcagggagcatcctggcgggagtgaccgtgatctggttgctgttcgaggggatcggctaccacctcctcaccttcttctgccactcgctcatggtcttcctcaccgtctgcttcgtctgggccaatgccgcctccttcatcaacaggtcacccccatgattagttcattctcgcttcttctactaacaatttagcttcgttttgttcttgtcagaagaatcgaaaactggtcctcctacaaaaatctatttgtggcttgatagatgaatattgatttaatagaatggttaatttcggagctatcttagaagtaactgaaaaaaaataaaagcacgaatatatatctggatttgatcagtttactcatgtcatttctctgtcatcttggtgctattcatgttggtctaatctttgttggctctagttgcttttgcctagctagctgtttattctgaagaattcatttctattacagtatatagttttctatatattcaatgtacaactgcactgctcaactgtatacgttgaactctttttatttcttcgaacaaaacctatacatgtacagttttaaaagagaacaattttgaaagagatttcggcccttgttaccaagtaatggatggagaggagtagaacaacaaattcatgctttgtggaggctgatataacatattagaaatttcaggggtcctccaaagttcccagatgcaattctgtctgaagtccaatgcctgaagattgctcatattctgaggaaagaaatcaatgaggccttcttaacattacgccatgtcgcctccggaaaagacctcaaaacatatcttatggtaatttttttttaattttattaattcccttttcatgtaattgacgcgcaatgtgatactggagcatcttcttcttcttccagacagttgcaggcctctggttcgtttctataattgggagctgcttcagcttcttgactttgtcttacaccagtaagcacattgtttactttctcagatttcactgcaaattactacttcctccgtttcacaatgtaagtcattctagcattccccacataatgaatctaaatagatatatatgtctagattcattaacatcaatatgaatgtagaaaatgctagaatgacttacattgtgaaacggagggagtagtagttttttgaggtgtgttctgaaagaattgtgaaatatgctcccatatctattgacaaaaaattgaagtaaaactcaaaggtttcccctttgcatatagaaaaactgtgtgataaagtatgtacattaatttctataattttactcacccttaccaaattatgaaaattatgttgattgcaaaacaaaattgatggatttattcacgaatatctgaatttgcattggttactgtttggggaaaaaacaaacacatgggaatgcacaatattgtgttctgatgtctactcgcattcgcatcagatcgaatatataacaataccttctcacttttgaatttgttacatgatagaaaattactactctgagttttgtttcttccatgcacgtttagggaaagtgtctccacgcaggtcagtcaaatagtaatttcgataaaaaaattcattacggtaggatattgaattatttaacctgttagtactaggtaatgttgaaaagctatgatcttacacttctatctcttctctttggatgacctggaaactgaaaagcctgaatctgaaaattatgatcagaaatgcagatcaatagataacaatttgtatctctatcgctcatcgtcgtttgagacactcaatttgatgcatgtttgcagttttcctgatggcatacacactgccaatgctgtatgagaaatacgaagatgaagtcgatgtcgtgggcgagaaggccctaatcgagctcaagaagcaatatgcagtgcttgatcacaagcttctctcaaagatcccaatgttagctgagaagaaacagcactaaactgatgctttgaagaccaaagccccttaatttgcatgtttcatcttcagctcagcacatcaccaaagtagtctatttgggtttcctctgtcatcttatagcaatatttgggatgacatcagatagaaatggttttgattctcgagcatccgaaaaccgggtttttttttggagcactagtacggagaacactgtagacggtcacatggagtagttgcttatgttccagtaactttcagttcatatttttgagcttctgtttggtcacaagatacatatgacacacaatttactatgattattatttgcatgtattatttgaggtattctgaatgctgaagaccatactaattagcagattaattcattttggtcctttctgttg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0312500, RefSeq:Os05g0312500