Os05g0315401

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Revision as of 10:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0315401| Description = Conserved hypothetical protein| Version = NM_001187413.1 GI:297723956 GeneID:9269808| Length = 2988 bp| Definition ...")
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Gene Name

Os05g0315401

Description

Conserved hypothetical protein

Version

NM_001187413.1 GI:297723956 GeneID:9269808

Length

2988 bp

Definition

Oryza sativa Japonica Group Os05g0315401, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:14498804..14501791

Sequence Coding Region

14498804..14499226,14499268..14500062,14500456..14500509,14500602..14501447,14501529..14501582
,14501654..14501791

Expression

GEO Profiles:Os05g0315401

Genome Context

<gbrowseImage1> name=NC_008398:14498804..14501791 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:14498804..14501791 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcgtctagagtatttatctgttagatttcactttggcggtgaattcattaacaattggagggaaacattttatgttggtggatctgagggtatgtcttacattgaacgtgacaaaatatccttgcctgagttaattgggtatctgaaagatcactgcgaagtgctccctggtatgcttttgcactggctttttcctgggaaagaactggcagatgggctgagggtgttggttgatgacaaggtctgtgactatatgtcaaagtgtgttgtggatggaggagtggctgaaatatatgtagaggcagtagtgggaggggagtccaatgagtctggtagcagtgatgacagtgactttgaagatgaattggaggacatgtctcttgctgatgatgaatgggatgatttaaatgatgatgcttcaacaccagagaagacaaaaagtgatttagatagattgagagcttggagtaccccaagcccaaaggataaggggaaagctgtggtactatgtgaagagagggtgaagagtgcagacttgtctggttctgacaatgattacgttggtggggactcttgttcatcaggagaagatcaagaggttgaggaaattaggaaggcatacaaggagtttaagaagaagctaaaggatggtgaggtaggaaatttagatgatgtgatctatatggggtcttcaagacagattaatgatggagccttggttcagattcagggtgaggaagataatagcccatatgagaacagcagtgcagatggtgattcatatgaagaggatagtgatggacagttggtcagaaagaagtccaaataccccatatttaatgccaaccagccccatgttaggcttgctcttgggatgaaatttgatgggaaaaaagagtttaaggaggcagtggtccagctagccttgcagaacaaaagattcataaggttccccaaagatgaaggttacaggacaagggcaaagtgtgactgggcaacctgtccatggagttttttgctatcaaggaacagcaggacaaatagctggcaaatagcaagtcttgttgatgagcacaattgtcctccaaggaaggataacaacctggtcacatacaagagaattgctcagaaatatgagaagacgatcatagataacccaacttggagtattcagagcatgcagtcaactgtctctgagcaaatgtttgcaaatgacttgggatttggtgaaggtgatggctgggtgtttatttcagaccagcagaagggaattgtaaatgcagttcagcactgggctccaagtgctgagcacagaaattgtgcaaggcatatttatgccaactggaagaagaaattcagcaagaaggagtggcagaagaagttttggaggtgtgccaaagctccaaatgtcatgctattcaacctagcaaaggcaagactggcacaagagactgttgaaggtgcaagggctatcatgaacacagatcctagccactggagcagggcttggttcaggtttggctcaaactatgattctgtagacaataatatttgtgagactttcaacaagtggatagttcaggctaggttcctacccattattagcatgttggaagctattagaaggaaggtgatggttaggatacatgagaaaataaccttgatggacaagtggctaggatcaatttgtccaaacatacataagaaacttaatgcatacatcatcgattcaggaaactgtcatgcaatctgcaatgggatggacaagtttgaagttaagcatcagaatcataggttcactgttgatcttgagaggaaaacttgttcatgcagaatttattccttcaaaaagacctacagctgttgtttggaacctgttgagggaatggaaagctggcctacatctgataggccaaggccaaaggctccaggttatgttagaatgccaggaaggccttccaagaaggaaatgagaagagagctacatgaaaagcccaaagcaacaagggtgtcaagggtagggtcagtgatgacttgcaggttgtgcaaactccttgggcacaacaaggcttcatgtcacaagaggagacagcaacagcagggcaatgtgcaggctcaaggatctcagccaagctctacacaggatcaggcacatgttgcagccaagcatatggcaaatgcttcatcatctcgaaagaggcagctgaaagcttcaacatctgcaagggcagctggaatggttggggttgagcagccaagaaagaagttggaagttaggagatctcctcggctaaacagaggatga</cdnaseq>

Protein Sequence

<aaseq>MDRLEYLSVRFHFGGEFINNWRETFYVGGSEGMSYIERDKISLP ELIGYLKDHCEVLPGMLLHWLFPGKELADGLRVLVDDKVCDYMSKCVVDGGVAEIYVE AVVGGESNESGSSDDSDFEDELEDMSLADDEWDDLNDDASTPEKTKSDLDRLRAWSTP SPKDKGKAVVLCEERVKSADLSGSDNDYVGGDSCSSGEDQEVEEIRKAYKEFKKKLKD GEVGNLDDVIYMGSSRQINDGALVQIQGEEDNSPYENSSADGDSYEEDSDGQLVRKKS KYPIFNANQPHVRLALGMKFDGKKEFKEAVVQLALQNKRFIRFPKDEGYRTRAKCDWA TCPWSFLLSRNSRTNSWQIASLVDEHNCPPRKDNNLVTYKRIAQKYEKTIIDNPTWSI QSMQSTVSEQMFANDLGFGEGDGWVFISDQQKGIVNAVQHWAPSAEHRNCARHIYANW KKKFSKKEWQKKFWRCAKAPNVMLFNLAKARLAQETVEGARAIMNTDPSHWSRAWFRF GSNYDSVDNNICETFNKWIVQARFLPIISMLEAIRRKVMVRIHEKITLMDKWLGSICP NIHKKLNAYIIDSGNCHAICNGMDKFEVKHQNHRFTVDLERKTCSCRIYSFKKTYSCC LEPVEGMESWPTSDRPRPKAPGYVRMPGRPSKKEMRRELHEKPKATRVSRVGSVMTCR LCKLLGHNKASCHKRRQQQQGNVQAQGSQPSSTQDQAHVAAKHMANASSSRKRQLKAS TSARAAGMVGVEQPRKKLEVRRSPRLNRG</aaseq>

Gene Sequence

<dnaseqindica>1..423#465..1259#1653..1706#1799..2644#2726..2779#2851..2988#atggatcgtctagagtatttatctgttagatttcactttggcggtgaattcattaacaattggagggaaacattttatgttggtggatctgagggtatgtcttacattgaacgtgacaaaatatccttgcctgagttaattgggtatctgaaagatcactgcgaagtgctccctggtatgcttttgcactggctttttcctgggaaagaactggcagatgggctgagggtgttggttgatgacaaggtctgtgactatatgtcaaagtgtgttgtggatggaggagtggctgaaatatatgtagaggcagtagtgggaggggagtccaatgagtctggtagcagtgatgacagtgactttgaagatgaattggaggacatgtctcttgctgatgatgaatgggatgatttaaatgatgatgctgtgtttgaattacctactgggaagcctattctgttattcagtcaacaccagagaagacaaaaagtgatttagatagattgagagcttggagtaccccaagcccaaaggataaggggaaagctgtggtactatgtgaagagagggtgaagagtgcagacttgtctggttctgacaatgattacgttggtggggactcttgttcatcaggagaagatcaagaggttgaggaaattaggaaggcatacaaggagtttaagaagaagctaaaggatggtgaggtaggaaatttagatgatgtgatctatatggggtcttcaagacagattaatgatggagccttggttcagattcagggtgaggaagataatagcccatatgagaacagcagtgcagatggtgattcatatgaagaggatagtgatggacagttggtcagaaagaagtccaaataccccatatttaatgccaaccagccccatgttaggcttgctcttgggatgaaatttgatgggaaaaaagagtttaaggaggcagtggtccagctagccttgcagaacaaaagattcataaggttccccaaagatgaaggttacaggacaagggcaaagtgtgactgggcaacctgtccatggagttttttgctatcaaggaacagcaggacaaatagctggcaaatagcaagtcttgttgatgagcacaattgtcctccaaggaaggataacaacctggtcacatacaagagaattgctcagaaatatgagaagacgatcatagataacccaacttggagtattcagagcatgcagtcaactgtctctgagcaaatgtttgcaaatgtcagtgcatcttagtgcaagagagcaaaagcatatgtcctgaagaagatatatgagtctagaagggatgaatactccagaatttttgactatcaattggaattgttgaggagtaatcctgggagtatagttgttgtcaagcttgatactgaccagccaagcccagtgttcaaaaggatatatgtttgcctagctgcttgtaagaatgggttcctattgggatgtagaaaggttgttggtttggatggctgctttttcaaaggttcaaacaatggggagctattatgtgctgttggcagagatgccaacaactctatgtacccaattgcatgggctgtggtataaaaggaaacaaatgactcatgggattggttctgtgatttgctatgcaaggacttgggatttggtgaaggtgatggctgggtgtttatttcagaccagcagaaggtatactcttctaacatattttgttcagtgttatttactgtatttcttgatgtgttgttgttattaaatggcttctatgtggttgattgcagggaattgtaaatgcagttcagcactgggctccaagtgctgagcacagaaattgtgcaaggcatatttatgccaactggaagaagaaattcagcaagaaggagtggcagaagaagttttggaggtgtgccaaagctccaaatgtcatgctattcaacctagcaaaggcaagactggcacaagagactgttgaaggtgcaagggctatcatgaacacagatcctagccactggagcagggcttggttcaggtttggctcaaactatgattctgtagacaataatatttgtgagactttcaacaagtggatagttcaggctaggttcctacccattattagcatgttggaagctattagaaggaaggtgatggttaggatacatgagaaaataaccttgatggacaagtggctaggatcaatttgtccaaacatacataagaaacttaatgcatacatcatcgattcaggaaactgtcatgcaatctgcaatgggatggacaagtttgaagttaagcatcagaatcataggttcactgttgatcttgagaggaaaacttgttcatgcagaatttattccttcaaaaagacctacagctgttgtttggaacctgttgagggaatggaaagctggcctacatctgataggccaaggccaaaggctccaggttatgttagaatgccaggaaggccttccaagaaggaaatgagaagagagctacatgaaaagcccaaagcaacaagggtgtcaagggtagggtcagtgatgacttgcaggttgtgcaaactccttgggcacaacaaggcttcatgtcacaagaggagacagcaacagcagggcaatgtgcaggtactaacttgttcatgcagattttgcttaaatttattactagcacagcatcataactgatattttctctcaaccttacaggctcaaggatctcagccaagctctacacaggatcaggcacatgttgcagccaaggtaataatggcttgcttcctgtttgcacttgcttcagtcctatgtctaactgctaccacttgctgttgcagcatatggcaaatgcttcatcatctcgaaagaggcagctgaaagcttcaacatctgcaagggcagctggaatggttggggttgagcagccaagaaagaagttggaagttaggagatctcctcggctaaacagaggatga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0315401, RefSeq:Os05g0315401