Os05g0316200

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Revision as of 10:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0316200| Description = Conserved hypothetical protein| Version = NM_001061709.1 GI:115463148 GeneID:4338392| Length = 5601 bp| Definition ...")
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Gene Name

Os05g0316200

Description

Conserved hypothetical protein

Version

NM_001061709.1 GI:115463148 GeneID:4338392

Length

5601 bp

Definition

Oryza sativa Japonica Group Os05g0316200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:14592146..14597746

Sequence Coding Region

14592325..14592406,14592530..14592799,14592906..14592978,14594696..14595027,14595791..14595932
,14596353..14596478,14597112..14597493

Expression

GEO Profiles:Os05g0316200

Genome Context

<gbrowseImage1> name=NC_008398:14592146..14597746 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:14592146..14597746 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaccatggaggcggagcgcgacggcgaggagcagcgccgccccctcctctcctcctcctctccgccgccaccgtcgccagcggcggaacatcagcatcagcaccagcagcagtaccagtacctgggccgcagcagctcgtcggcgctgcgcggcggcggtggcggaggaggaggaggagcgggctggggcgtggggccggaggtcagcgccgcggaggtcaggtccgccgcgtcgatctcctccgccagctactacccaccgccgccggctctccaccacgacgtctacccgccggacatccactccccgtccccatcgccagctgcccctactgctccgcaccctcacggaggattagcaattgttcctcaagggccgtacccgtatggcggcgaataccagccttctcatgatggcagaagggatgtactggatgaggtagagatccggcagctccttattgatcatgttgggcatcggtgctgctggggaagtaggcctgctcgcacatggaaaattacctctattgaggattgcaatgtatatgttggaactttggaaactttcatcgaggaaagggacactgtaactaacaaggaaccctatgatggtgggaaaatagatggaagagacaagggtcctgtgcttgcagtgtgggaacttgatctgaggtctgagtttcctctactgtttgtaccagaaaaagaagtaatggtcaagatccctcactcagaagtaattgaaaaatgcttagattgcgagagtcgtggagagataccatgtcctatttgcaatgctggtcaggagcacggattttacaaggcaaatcagatgacccgttgcagtgcatgtcatgggaggggtttacttgctcaccaagatggatctgatacagtatgtggaatgtgcagtggtaaaggaatgttgccttgtatagcatgtggatcgcgtggcctagtaacatgcaagacatgtagtggctatggttcccttctcgcaaaaagcactgctcatgttcgatggaagacactgtcagcaagaaaagtgagcgcaactaggggagctgcctctgtgcctgacgaagtattccacagagcccaggggattcagctatgcaacatacaggcgtaccagtgcactcctgcattcttcgccgattcgtaccagctcaaccagttctcctcagaagtcgtagctagccggcttccagttccaccgtccgcgagggtcatttccgagaggcacatcatctccgtcgtgcctgtgatccgtgtcacaatggctcatcgcaagcaatgtttcagcttctacgtcgtcggctacaatagggatgttttcataagagattatccttcgaaattctgctggggcctctgctgttgctttgagtggctgcggaactag</cdnaseq>

Protein Sequence

<aaseq>MTMEAERDGEEQRRPLLSSSSPPPPSPAAEHQHQHQQQYQYLGR SSSSALRGGGGGGGGGAGWGVGPEVSAAEVRSAASISSASYYPPPPALHHDVYPPDIH SPSPSPAAPTAPHPHGGLAIVPQGPYPYGGEYQPSHDGRRDVLDEVEIRQLLIDHVGH RCCWGSRPARTWKITSIEDCNVYVGTLETFIEERDTVTNKEPYDGGKIDGRDKGPVLA VWELDLRSEFPLLFVPEKEVMVKIPHSEVIEKCLDCESRGEIPCPICNAGQEHGFYKA NQMTRCSACHGRGLLAHQDGSDTVCGMCSGKGMLPCIACGSRGLVTCKTCSGYGSLLA KSTAHVRWKTLSARKVSATRGAASVPDEVFHRAQGIQLCNIQAYQCTPAFFADSYQLN QFSSEVVASRLPVPPSARVISERHIISVVPVIRVTMAHRKQCFSFYVVGYNRDVFIRD YPSKFCWGLCCCFEWLRN</aaseq>

Gene Sequence

<dnaseqindica>180..261#385..654#761..833#2551..2882#3646..3787#4208..4333#4967..5348#aatcacatattggagacagcgacgcgcccatctgatttagacgggaggacgccggccgcctgacttcctccctccgagactccttcgcggcgaaggctttacagagctgcaggcagctcatgccgttataatccccctcgcgactcgcgagccaagtgagaccaacccccaactcgacgatgaccatggaggcggagcgcgacggcgaggagcagcgccgccccctcctctcctcctcctctccgccgccaccgtcgccaggtaggcgtactgccaccgccttcgccgtccgccctcgttctctccccgatcccccatttcaggctccgtctcgtgatcgtctcaccctgcctgcctcgtttcgtcgaattccgttccctgcagcggcggaacatcagcatcagcaccagcagcagtaccagtacctgggccgcagcagctcgtcggcgctgcgcggcggcggtggcggaggaggaggaggagcgggctggggcgtggggccggaggtcagcgccgcggaggtcaggtccgccgcgtcgatctcctccgccagctactacccaccgccgccggctctccaccacgacgtctacccgccggacatccactccccgtccccatcgccagctgcccctactgctccgcaccctcacggtgattccgcatcgcctcttcttcttcttcttcttctcgtctctctgcatttcgcatcgcatcagctgtgtccgtgaccctaacatcagttggttataccttgcaggaggattagcaattgttcctcaagggccgtacccgtatggcggcgaataccagccttctcatgatggcagaaggtgagcacttccaatcgaaatcgggtatttgctgattagctgttatgatcctgctgccgcaagatcatataactaaaatgggtagtatgaagtgtgaacgtggtaagaaattggggaccgaagacgaacataagagagaggcgctgtgtccattaaaacgcgtgagatatccaccctacttgaatcccagttgctcctatatgtccccttctgaacttgtttgcgcctccttttcccatgccaggtacttgtaaaggttcttaagagtagccagctagttggcaagcagtagccagattatctctcatatttagcaagcggaatgtgcaatattttgatttggtgttgcagtggccagttggataatattgcgaaacgatatgtctgcacaaatggcacagtcaggccagaaagattttgacaatttgctagctaatgtagtgccaattacacatactcagattgtaagtagggccaattcagtcatctttctgattgtagcctgatgcatgccacctccttttaccagttattgttgaataggtagtattcacatgatggtcaaatagtgcagtgatctttctagcctccaaaatccaaaataaatatctgttgggttgcctcttattgatttagctgatcttgccttcaactccatctacaaaccaataatttaacatgaataataatgaagagataatgcccgtgcacactaatatgaaattgttgaattttccttcgaataaattctcggaaaaaaaggggggaaaacttggaaaatgagcgaatgagcaataagcactgggatgcaaaatactgtatttgataagattgaccagaaatatattatttcactaaaaaccataaattccactataagcatataggattcaacagagaaaatactggctgcatccaaaagtcaacctggaaatagttctcttggtgcttatataacctcagattctcagtacatcagcgcacagctgaaatattcaaatcacaattaatccatatttccaaacattagttataccattgtgcattctgctcaagcagttagctttcaacagcacacacatgcctaatttaatttgtgccagtattaaaaaagtacatggcaacagctaaattattgtctttgtgaccaacttatgtaagctgattgatacttggtttgtccgttggccccaaatctcataaaaatgaaaacactgtttgctcttggtctgttgtcctgtgcaaatttgaagagtggcaagaagtgatttgggatgggaatgacttggtacttgtagttgagggataatgcatcttgaaggaagaaagctctagagacctagaatatttgttattgagcatcgcttgggttggttgtagtggggttgtttccttgaccccttctttgtacatatatttgctttcttaatgaaatgaaacagagctctcctgtgttttcgagaaaaaaagacctagaatatttgtagaagtaccagattgttagacagataaaaagagattgatgatgtggagcattggaataactagttttgcactaatatctataatgattcctcatttttctctgatggcaaaaggaaaggaaccatagctaacctgcacattatttcccttttgttccatttttttcctgcaatgctttctttcccaagatcataccaattcttcacatggaatgattgaaatatgctgacagggatgtactggatgaggtagagatccggcagctccttattgatcatgttgggcatcggtgctgctggggaagtaggcctgctcgcacatggaaaattacctctattgaggattgcaatgtatatgttggaactttggaaactttcatcgaggaaagggacactgtaactaacaaggaaccctatgatggtgggaaaatagatggaagagacaagggtcctgtgcttgcagtgtgggaacttgatctgaggtctgagtttcctctactgtttgtaccagaaaaagaagtaatggtcaagatccctcactcagaagtaattgaaaaatgcttaggtatggttttcattctgaagcactcatttagtcatatagtttcttttgccgattgtgtaatatctgtacttcccaactacaactactgtgtttcttgcggttgtcctagttcctatctattctgcaaatatccttctaagcgtcagctaaagttctgaaatatatttttcgtcccatcgtatatcatcaccttaattcttttcgtttatgttgttatgatgttatataggaatcgatatgtgcacttatttgggttttttaacacacatcatttttcttagaacacgcaagagatatgcgtatcatttcattaagatagagggaaaaaggtggacggcgttagagataaactctggcacctacccacccaggaattgcaacactgacactacacacttgaactcaccaaaacaggagaaaagataataggagatagtttttttttaaaagatgcaagagatctgtgtatcatttcattaagcaagaaagaaacacgaggagggggcagaaaaccccaaccttgcaaataaacaagtcttacaattacaaagactcggaatgacctttggctttcttaaaattatttgtagttggactccttaaatatatttttcttatcaaacacttctggcttcttcctttatactataattgtcctatcagtatgatggtatatatgttttgcacggcacatatcataatttattcatcattgttttttctattttgaatattctagtttctgatctaaattttctcctagattgcgagagtcgtggagagataccatgtcctatttgcaatgctggtcaggagcacggattttacaaggcaaatcagatgacccgttgcagtgcatgtcatgggaggggtttacttgctcaccaagatggatctgatacagtgttagtcctgcacttctgctgctaactttgttttttagttctacatctcgccgtttacattagtgtcattatctaaaaaaatagttcacatttgcacctaatttaaaggccactaaagaagcacatcaccacattaatcacctaattttggttgcctgttcaatttgagttggtaaaattgtgtacatgttaaggcagtattgttgcatttgttctttggtccactagatatttatttgtatttacatgtcaatggttgctattttatttaagtttttaattcatgcctgattagatagaaaatagtactctaaaatttgaaaaatgctttcctattattgagatattttacatctactggtaaaagtatgccacttctgttgaaaatgctcactttgtgcgtatctttatttgtaacagatgtggaatgtgcagtggtaaaggaatgttgccttgtatagcatgtggatcgcgtggcctagtaacatgcaagacatgtagtggctatggttcccttctcgcaaaaagcactgctcatgttcgatggtaatttgattctttttctgctgttgctgttttagtgtttacgttgagacgatgtatagtaacaagaaaataaaatcaaaatatgtgatggctgaaaggaacttataattgctacaatgctttatatcatgataatattggtttaatagttcagtaatcctgcaaatgtggtaaaaaaaagcgtagtggagaatttgttgttgtagatcttgtgaattgatgctttaattgtgagtttggcctatcatattagtttcattgttttagagagagtcctagcatattagttgattcatacaaaatacctcggtgatgttcagggaacttatttattaatgtttcatttgctggatgctttacagtcgcatctcctaaagctatcagtgtatctgtaacttatgcatggcatagtagaaaaaggcgtttctccatgatttgccatcaaccaagcaaagcaatttgtacacttataacgtgatgatatgcacattatggtttgaaggaacgcctctatgatttctacaggaaatttcttttatgctttttattcatgttttggagaaaatactttacgttttttttttcaataattacgtaatgcgttgatctaacttgaaattttcctgtttctaggaagacactgtcagcaagaaaagtgagcgcaactaggggagctgcctctgtgcctgacgaagtattccacagagcccaggggattcagctatgcaacatacaggcgtaccagtgcactcctgcattcttcgccgattcgtaccagctcaaccagttctcctcagaagtcgtagctagccggcttccagttccaccgtccgcgagggtcatttccgagaggcacatcatctccgtcgtgcctgtgatccgtgtcacaatggctcatcgcaagcaatgtttcagcttctacgtcgtcggctacaatagggatgttttcataagagattatccttcgaaattctgctggggcctctgctgttgctttgagtggctgcggaactagttatttcttgccatgtgacaaaaatcgagtgtgcagtattttatagtattacatacggagtaaggcttgtgtataattatagcaaaaccgaagattaaagagggttgaatgaataagcataaccctgtgtgttatgcattttttacattacagaagctgtatcctcgtattctattactagggcttcgtccatgtagatcatatctgtaacaactgctcgggcatgaatcaaatcagttgtgaagactttccc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0316200, RefSeq:Os05g0316200