Os06g0130500

From RiceWiki
Revision as of 20:17, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0130500

Description

Similar to Cyclophilin-like protein PPIL3b

Version

NM_001063225.1 GI:115466181 GeneID:4340003

Length

815 bp

Definition

Oryza sativa Japonica Group Os06g0130500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1634099..1634913

Sequence Coding Region

1634180..1634182,1634272..1634751

Expression

GEO Profiles:Os06g0130500

Genome Context

<gbrowseImage1> name=NC_008399:1634099..1634913 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:1634099..1634913 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcggtgacgctgcacacgaatctcggggacatcaagtgcgaggtgttctgcgaccaggcgccgcggacggcggagaacttcctggcgctgtgcgcgagcggctactacgacggcaccatcttccaccgcaacatcaaggggttcatgatccagggcggcgacccgacgggcacggggaaggggggcacctcgatctgggggaagaagttcgccgacgagttcagggagtcgctcaagcacaacgcccgcggggtgatgtcgatggcgaacagcgggcccaacaccaacgggagccagttcttcatcacctacgccaagcagcctcacctcaacggccactacaccgtgttcgccaaggtcatccatggattcgaggtgctcgacctcatggagaaggcgcagacggggcccggcgaccgccccctcgccgagatcaggctcaaccgcgtcaccatccacgccaaccctctcgccaactaa</cdnaseq>

Protein Sequence

<aaseq>MSVTLHTNLGDIKCEVFCDQAPRTAENFLALCASGYYDGTIFHR NIKGFMIQGGDPTGTGKGGTSIWGKKFADEFRESLKHNARGVMSMANSGPNTNGSQFF ITYAKQPHLNGHYTVFAKVIHGFEVLDLMEKAQTGPGDRPLAEIRLNRVTIHANPLAN </aaseq>

Gene Sequence

<dnaseqindica>82..84#174..653#gtcttccccaaagactcgagacttctctacgcttctcctcgccgccgaaacgaagcaacccgtcgcctcgccgccgccgccatggtaagccctcgccgctcgaatctcactctccctcaccggaaaatctcttccctgtggctgaccggaggaccgattgatctccgccgcagtcggtgacgctgcacacgaatctcggggacatcaagtgcgaggtgttctgcgaccaggcgccgcggacggcggagaacttcctggcgctgtgcgcgagcggctactacgacggcaccatcttccaccgcaacatcaaggggttcatgatccagggcggcgacccgacgggcacggggaaggggggcacctcgatctgggggaagaagttcgccgacgagttcagggagtcgctcaagcacaacgcccgcggggtgatgtcgatggcgaacagcgggcccaacaccaacgggagccagttcttcatcacctacgccaagcagcctcacctcaacggccactacaccgtgttcgccaaggtcatccatggattcgaggtgctcgacctcatggagaaggcgcagacggggcccggcgaccgccccctcgccgagatcaggctcaaccgcgtcaccatccacgccaaccctctcgccaactaatcctatctactccatctagtttaaaatctttggaattctgattgcttttttctgtgtggatgtgttgtgttctgctgctatctgaatctttgttgcaagaacaccgtacaaactgagtctgtaactgatatcccaaaaagtgtttggcttcacgattgatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0130500, RefSeq:Os06g0130500