Os05g0317300

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Revision as of 10:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0317300| Description = FAR1 domain containing protein| Version = NM_001061713.1 GI:115463156 GeneID:4338396| Length = 2952 bp| Definition ...")
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Gene Name

Os05g0317300

Description

FAR1 domain containing protein

Version

NM_001061713.1 GI:115463156 GeneID:4338396

Length

2952 bp

Definition

Oryza sativa Japonica Group Os05g0317300, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:14679917..14682868

Sequence Coding Region

14680159..14682489

Expression

GEO Profiles:Os05g0317300

Genome Context

<gbrowseImage1> name=NC_008398:14679917..14682868 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:14679917..14682868 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagacaatgatgacagggcgtcagctgagattaccactgaccaagagaatcatctcaaggacgccttaatccaggtgtttgctgctacttctgaacaccaagaaggtgaaggtgaagctgcagaggttgtgcaggatgaagagattggtgaaggtgtggagggtgtgcgggatgaggagattggagatatcaattcgaagcccgacaaaccatatgttggcatggagtttcgtgacaaggacgaggcaaagaactattatgatgactacgcgaggaaatggggtttcataacaaagatttcaagctgtagaagaagccagatcacaaagcaatacaatcggtatgagttcgcttgccactccgagcggagctcgagggaatctggtgctagtgctggcagcaggtcaaggaggtccagtagagttctgaagacaggttgtaaggcaagaatggtggttgtgaagagggatgagaagtgggtggtcaccatagtagatctggatcacaaccatccacctttgaacccttctgcacttatgtccttaaagcctcatcgcctcataaaagatgaagatcatgatctcttagagtttctgcgcacaaacaagatacccacgcagaggatcatgtctgttctctgtgatttgtatggaagcatgcaaaacatccctcttgcaaggaaagatgtgagcaacctgagggcgaccatgaggccagaggctgagggcacctgcactgatatggcagctacaatcaaatacttccaagaatcgcaagcagatgacccatcattcttttacagtatggaattggacagcgaaagcaaaattaccagcgtcttttgggtggatggagtatcaagggaagcatatagagaatttggtgattgcgtgttttttaacacaaaatacatcacaacaaagtactgtcttccatttgcgcccattattggtatgaacaatcatgggcagactgtgcttttcgggtgtgtgttgctgaaggctgaaattgaggagacatttgaatgggtgtttcagacttttcttaaggccatggatgggaaagtgccaaagagtatcatgaccgatcaagatgaagcaatggagaacgcaatcgcaaatgttttgccaaacacatctcataggcgttgctcatggtacatatggagaaatgctaagttcaagcttggtgtgctgccgtctcggttggaagggtttgaagatgacctaagacattgcattgacgagtcatttaatgttgaagagtttgaaagaagatgggctgctgtgcttgaccgatacaatttggcaagcaacaagtatatgcaggacctctacgaaatcagagaaaaatgggttccatgctatttcatggactgcttcttcccatttatgagcattacccaacagagtgaggtgatggaagcattgttcaaggattttgtccaccctggggacatcatccagaacttcatcgtgcaatatgagaagctcgttcaatcttgtctggacagggatgataaacagctctttcttactgtcaaaacagatgcaaatttgtggtccaaatttccaatggaggagcaagcatcaaaattctacactcgtgcaatatttgagaggtttcaggagcacctcaagaacactactatgtacaatgtagtatgcgaggcaaccccttattcctatttggtccaaaatgtgtttggtgaccaaagccagaacagaagatatgttgttcattgcaaattggaggatgagaccttcacatgtgtttgcaagcagtatgagagggaaggattactctgtgagcatatcctaaaggtgatgacacataggaatgtcaatctgataccagataaatacttgttccgtaggtggactctgaagggatcagacagtgctgctacacgaagtcatgtacctttgaacatggctgaagcgtccactaggaaaatgaggtattcaacaatttgcaagaaatcagtgtgcatggcaagtgaggcatgtagaacacaggaaggatacaatctagccctccgttcaattgaagaactgactgacaagcttgccgctattaacttgacccgacaagatcaacaccttcctcggcccaacatttgtgataagaatgggaaagggatcaccatgggtgagagtaatacgatagctgagaaggtgctttcagaaagctgtctaaaagatccaacaaaaatcaggcctgctgcgtttgacaataatagtgagtcagcaagaaagagaaacaaagtgatgaaagcggtgcaagatctcaggagtccatttcaggtaacaaaactgacggattga</cdnaseq>

Protein Sequence

<aaseq>MEDNDDRASAEITTDQENHLKDALIQVFAATSEHQEGEGEAAEV VQDEEIGEGVEGVRDEEIGDINSKPDKPYVGMEFRDKDEAKNYYDDYARKWGFITKIS SCRRSQITKQYNRYEFACHSERSSRESGASAGSRSRRSSRVLKTGCKARMVVVKRDEK WVVTIVDLDHNHPPLNPSALMSLKPHRLIKDEDHDLLEFLRTNKIPTQRIMSVLCDLY GSMQNIPLARKDVSNLRATMRPEAEGTCTDMAATIKYFQESQADDPSFFYSMELDSES KITSVFWVDGVSREAYREFGDCVFFNTKYITTKYCLPFAPIIGMNNHGQTVLFGCVLL KAEIEETFEWVFQTFLKAMDGKVPKSIMTDQDEAMENAIANVLPNTSHRRCSWYIWRN AKFKLGVLPSRLEGFEDDLRHCIDESFNVEEFERRWAAVLDRYNLASNKYMQDLYEIR EKWVPCYFMDCFFPFMSITQQSEVMEALFKDFVHPGDIIQNFIVQYEKLVQSCLDRDD KQLFLTVKTDANLWSKFPMEEQASKFYTRAIFERFQEHLKNTTMYNVVCEATPYSYLV QNVFGDQSQNRRYVVHCKLEDETFTCVCKQYEREGLLCEHILKVMTHRNVNLIPDKYL FRRWTLKGSDSAATRSHVPLNMAEASTRKMRYSTICKKSVCMASEACRTQEGYNLALR SIEELTDKLAAINLTRQDQHLPRPNICDKNGKGITMGESNTIAEKVLSESCLKDPTKI RPAAFDNNSESARKRNKVMKAVQDLRSPFQVTKLTD</aaseq>

Gene Sequence

<dnaseqindica>380..2710#aagggctcgtcctccgcctccgccgccgcggctgcctcggcgtcggtggcaggcgccgccgtacgccaccgcgctcctttcctcgccgccgccatcaagcgctctccgcgggacatctacaggacggctactcgcccgccggagcccttgacctcctcgcctccgggcgacccagacctggcgcggctcttcgtcgggctcgcacgctctattcgatccgtgcgggtgcgaccgggcgatctgaagtctcgctgagcatcaggtaagtttcccttggcttgattggtggcgttcacggtgggtgtatgctacgtgttcgatcaaatgcctgacagggcctggtccggttgctgctgtggtgcaggcctttttcggtcacatggaagacaatgatgacagggcgtcagctgagattaccactgaccaagagaatcatctcaaggacgccttaatccaggtgtttgctgctacttctgaacaccaagaaggtgaaggtgaagctgcagaggttgtgcaggatgaagagattggtgaaggtgtggagggtgtgcgggatgaggagattggagatatcaattcgaagcccgacaaaccatatgttggcatggagtttcgtgacaaggacgaggcaaagaactattatgatgactacgcgaggaaatggggtttcataacaaagatttcaagctgtagaagaagccagatcacaaagcaatacaatcggtatgagttcgcttgccactccgagcggagctcgagggaatctggtgctagtgctggcagcaggtcaaggaggtccagtagagttctgaagacaggttgtaaggcaagaatggtggttgtgaagagggatgagaagtgggtggtcaccatagtagatctggatcacaaccatccacctttgaacccttctgcacttatgtccttaaagcctcatcgcctcataaaagatgaagatcatgatctcttagagtttctgcgcacaaacaagatacccacgcagaggatcatgtctgttctctgtgatttgtatggaagcatgcaaaacatccctcttgcaaggaaagatgtgagcaacctgagggcgaccatgaggccagaggctgagggcacctgcactgatatggcagctacaatcaaatacttccaagaatcgcaagcagatgacccatcattcttttacagtatggaattggacagcgaaagcaaaattaccagcgtcttttgggtggatggagtatcaagggaagcatatagagaatttggtgattgcgtgttttttaacacaaaatacatcacaacaaagtactgtcttccatttgcgcccattattggtatgaacaatcatgggcagactgtgcttttcgggtgtgtgttgctgaaggctgaaattgaggagacatttgaatgggtgtttcagacttttcttaaggccatggatgggaaagtgccaaagagtatcatgaccgatcaagatgaagcaatggagaacgcaatcgcaaatgttttgccaaacacatctcataggcgttgctcatggtacatatggagaaatgctaagttcaagcttggtgtgctgccgtctcggttggaagggtttgaagatgacctaagacattgcattgacgagtcatttaatgttgaagagtttgaaagaagatgggctgctgtgcttgaccgatacaatttggcaagcaacaagtatatgcaggacctctacgaaatcagagaaaaatgggttccatgctatttcatggactgcttcttcccatttatgagcattacccaacagagtgaggtgatggaagcattgttcaaggattttgtccaccctggggacatcatccagaacttcatcgtgcaatatgagaagctcgttcaatcttgtctggacagggatgataaacagctctttcttactgtcaaaacagatgcaaatttgtggtccaaatttccaatggaggagcaagcatcaaaattctacactcgtgcaatatttgagaggtttcaggagcacctcaagaacactactatgtacaatgtagtatgcgaggcaaccccttattcctatttggtccaaaatgtgtttggtgaccaaagccagaacagaagatatgttgttcattgcaaattggaggatgagaccttcacatgtgtttgcaagcagtatgagagggaaggattactctgtgagcatatcctaaaggtgatgacacataggaatgtcaatctgataccagataaatacttgttccgtaggtggactctgaagggatcagacagtgctgctacacgaagtcatgtacctttgaacatggctgaagcgtccactaggaaaatgaggtattcaacaatttgcaagaaatcagtgtgcatggcaagtgaggcatgtagaacacaggaaggatacaatctagccctccgttcaattgaagaactgactgacaagcttgccgctattaacttgacccgacaagatcaacaccttcctcggcccaacatttgtgataagaatgggaaagggatcaccatgggtgagagtaatacgatagctgagaaggtgctttcagaaagctgtctaaaagatccaacaaaaatcaggcctgctgcgtttgacaataatagtgagtcagcaagaaagagaaacaaagtgatgaaagcggtgcaagatctcaggagtccatttcaggtaacaaaactgacggattgaagtacagggtatcagtccatccttgatgtctgattatgtaaatgcaatagtgtccttgtgcccccttctcttaactcgctgacctgtaaggaaagaaggatttgctgcacatgggagaacggtgctagccttgttgacttcttctttttttctttttttttttttagcaaatgccctgctggagttaatgtgctataacgtcattttggcactttggtagtgattgcgctcttccgtatctg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0317300, RefSeq:Os05g0317300

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os05g0317300&oldid=13760"