Os05g0317700

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Revision as of 10:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0317700| Description = Similar to Resistance protein candidate (Fragment)| Version = NM_001061714.1 GI:115463158 GeneID:4338398| Length = 5...")
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Gene Name

Os05g0317700

Description

Similar to Resistance protein candidate (Fragment)

Version

NM_001061714.1 GI:115463158 GeneID:4338398

Length

5028 bp

Definition

Oryza sativa Japonica Group Os05g0317700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:14694419..14699446

Sequence Coding Region

14696720..14699245

Expression

GEO Profiles:Os05g0317700

Genome Context

<gbrowseImage1> name=NC_008398:14694419..14699446 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:14694419..14699446 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatacacccaagcctactaactaccatccaatgggtcgcactgtctaccctcatattgatcaccatagcggctgataactactcatcatcctctagcccaatctttctaaattgtggagcctccaccatgcaacttgatatcaataatcggagttgggagggggacactagatccaagtttgcatcagcaatgaatggaattgcagctagtgctacataccaagacccttcactcccatctcttgtgccttacatgacatcccgtatattcatttcaaattacacctattccttcccaattagcccagggcggatattcgtgcgcctttacttctatccagtggcctatggctactatgcttctgaagatgcttactttggtgtcaaaacaaacaatttgattcttttagacaacttcaatgcttcacaaactgctcaggcagcaaactatgcctacatccttcgagaattctcgctgaacgtcactttaggtagtctagacctcacctttttcccatccacacagaatggttcttatgcatttgtgaatgggattgagattgtgcccacgcctgacatcttcacaacacgaacacctacacataacaccgaagggaaccttgatccatccgatatagattctatgaccagtttccaaacgatgtaccgtctcaatgttgggggccaggcgatcattccacaaggtgattctaggttctatcgttcatgggaggatgactctccatacatatatggtgctgcctttggggtgaccttcggcaaagatagtaatgtcaccatcacatatccaggtactatgccaaactacactgcacctgctgatgtgtatgcaacagcacgatcaatgggcccaaattggcagatcaacctgaactacaatcttacatggatcttatcggttgacgcagggttttactacctcttaaggttccatttctgtgagatccagtatcctataaccaagatgaatcagaggtcattcttcatttacatcaataatcagacggtgcaggatcaaatggatgttattcgttggagtggaggaattggcatggcaacatatgctgactatcttatcgtcacagttggttccggtcagatggatttgtgggttgcacttcatcctgatctttcaagtagaccacagtattatgatgcaatactaaatggccttgaggtcttcaagctatgggacattgggaaaaaaaaccttgctgggcttaaccctccacttccaccacaaccaaagactgatgtgaaccctaaaggggtgtctggtggagggaaattaaaggctgctgtcccagcagccatatgtgccgtggttgtgctgattacagcttgtttttgtgtgtgcatcatctgtagacgaaagaaagtggcaaagcattctggcaagactgacaaaaagtgcttgacttatcaaactgaattatacaaatcaccatcaaatctttgtcggaacttcaccttccatgaaatgcaaatagcaactagtagctttgatgaaacccttctgcttggtagaggtggatttggtgatgtgtaccgtggagagatagataatggtacaacggtggcgatcaaacggagcaacccattgtccctgcagggtgttcatgagttccagaccgagattgagacgctgtccaaggtcagacatggccatcttgtgtctctaatcggatactgccaggaaaaaaatgagatgattttggtgtatgaatacatggcccgtggaacacttcgggagcacctgtacagcaccaagaggccaccattaccatggaaggagcgcctcaagatctgcattggtgcagcccgagggctgtattacctgcacacgggcccgaaagaaacaatcatccatcgtgacgtgaagactgccaacattctactagatgacaagtgggtggcaaaggtttcagactttgggttgtccaaggttaatccggacattgacgccacccatgttagcactgttgtgaagggtacattcggatatttcgaccctgagtattttcggttgaagcaacttacccaaaggtcagatgtgttctcttttggggttgtgttgtttgagatcctgtgcgctcgccctccagtaaacactgagcttccagaagagcaagtgagcttgcgtgaatgggcattgtcttgcaagaagataggcactcttggtgaaattatagatccctatcttcagggagaaatcgctcctgattgcctcaagaagtttgctgattgtgcagaacaatgtgttgctgatcgaagcatcgacaggccagagatgggtgatgttcttcggaacctagaggttgctctgaagatgcaggagtgtgcagagaacaatagcaaattcagtgaagaaacaacatcgtcgaagacaacaccagacatgatgaccatcatggatactgacaaacaatccacctactcgacaatgagcatcactggacaaaggaccatattctctgatatgatggatccgcaggcccgatga</cdnaseq>

Protein Sequence

<aaseq>MIHPSLLTTIQWVALSTLILITIAADNYSSSSSPIFLNCGASTM QLDINNRSWEGDTRSKFASAMNGIAASATYQDPSLPSLVPYMTSRIFISNYTYSFPIS PGRIFVRLYFYPVAYGYYASEDAYFGVKTNNLILLDNFNASQTAQAANYAYILREFSL NVTLGSLDLTFFPSTQNGSYAFVNGIEIVPTPDIFTTRTPTHNTEGNLDPSDIDSMTS FQTMYRLNVGGQAIIPQGDSRFYRSWEDDSPYIYGAAFGVTFGKDSNVTITYPGTMPN YTAPADVYATARSMGPNWQINLNYNLTWILSVDAGFYYLLRFHFCEIQYPITKMNQRS FFIYINNQTVQDQMDVIRWSGGIGMATYADYLIVTVGSGQMDLWVALHPDLSSRPQYY DAILNGLEVFKLWDIGKKNLAGLNPPLPPQPKTDVNPKGVSGGGKLKAAVPAAICAVV VLITACFCVCIICRRKKVAKHSGKTDKKCLTYQTELYKSPSNLCRNFTFHEMQIATSS FDETLLLGRGGFGDVYRGEIDNGTTVAIKRSNPLSLQGVHEFQTEIETLSKVRHGHLV SLIGYCQEKNEMILVYEYMARGTLREHLYSTKRPPLPWKERLKICIGAARGLYYLHTG PKETIIHRDVKTANILLDDKWVAKVSDFGLSKVNPDIDATHVSTVVKGTFGYFDPEYF RLKQLTQRSDVFSFGVVLFEILCARPPVNTELPEEQVSLREWALSCKKIGTLGEIIDP YLQGEIAPDCLKKFADCAEQCVADRSIDRPEMGDVLRNLEVALKMQECAENNSKFSEE TTSSKTTPDMMTIMDTDKQSTYSTMSITGQRTIFSDMMDPQAR</aaseq>

Gene Sequence

<dnaseqindica>2302..4827#tgggttggtggagttctcatatggctcagacatggtctcatggtgtggagagaagcatgagaaaggagagagtagatcagcaatacgttgtttctattcattgatatcttgacatcttgtttctattcagtgatcataaccagtccaatccagtttatgcagttttctccccttcgcgatggagttttcatgcatctggagtgatcttatcaggtaagttctttccacgttgtctcatcattttgttctccaggtttcctgtaatcatatttgatataaggtagtgctaaccttctctccagatcatggcttcatttttagaaataagctctgccctttatttgatatcttcttttcctgcttcgtagagttgtttgtgatcttacagttttacaggcttcaaaacccagctattttggcttcaattttttcccattacagttatttaattaatttatgatctaccttatgttgcttttgtatgttttcctcttgaagttaaattaggggatgttcggcacctagatttgctttaaaccaattcgactttaattcagaattccaattagagtaaatttaataaaaccccatgttttattaccaaagttaaaaaaatgcgttattgtagcatgtactttgatgctaaagtttcacaaaatctcaaccctatttaaattccagacaatgtagcatgtatttacttaatttttgccattataaaatgtctatagaatttgaattacgaatttcttggttaaaatgtttcattatattgaacccttcattactctgaacaatattgttttaaatatttaaaatttgctaagagttgaataagggcgggactttatgaaaattttaacctatatgctaccagctataactcccagagtttatagcaagtttgacaatgaataacctatagtttactgtgaaatttgttcttgtatttactttgatatttttgaaatttgaatggaaaaccatacaattattttttagatttaatatgaattccttttttcttggttgcttgacatggactctttacttttaaatttgtaatcccaatttgaacacagagtcttattaatgaaactgtttcgaggactggattggaacacagaggagatctgcctaaacaggattggactggttatgatcactgaatagaaaccagagtcttattaatgaaaccatacaatttgaacgcagatctcctgcgtgcaaaaaaagttattgaacataggctttttggggtcgcgggagggggttgctacacataggccattgagctcaattgaggcctgcacacaaacatttgttttagtgcttgagctgaaagaatgtgatggaactgtttcgagaaaatcactaagtggggatgaactgtaaatgttatatagaatttgtagccttttaaacatctaggactatattcttgaaggactctaattaatattctttgtacaggagtgcaaaaattgtcttttgatgacctagacatatcgttaatctgcggcaaccacatagacaatgttgcattttctttctttaatcatgtgcctgtagatgctactgtcctgataccatccaatggcttgttctggagtctttgttttgttctttcttttattcatcctatattggtcattttcttctcattacaaatttgtgacctttaacctgatgattttttttggcaaaaaaaactcgtcacattaagtgtaatagaacaggagctcctagtagttcatgcaaatattctattctcccatacctctctttttgaaaatgtaacgaatatttgagcaaatagttaaatatgagatcgtgagtaatatgtgttaaactagaagatggatcaagccaaaatgttttgccataatattcaactctgttctcttctgcagaatttactagcggtttttcatagtacttggtacaatgtatattattttggtgtgttttcttccatgatgaattattgatgttgcttcaatcttcagtttgattataatttcttaagcagaaacttacaatacaattagctgaatttccaaattctttgtttcttgtgattgcagggaagtctatagctatctggacatgatttctccataaaaaacagttcaattcctcaaacactccaatttccttgccccaagtcccacccatagaaaacattacgcaatcgttcccacctatcttatagcaatttgttagccggtaattttatagcattgatgtgaaggaaccttcaaacttccatattttcatacaaaacaacaatcattacctatgatacacccaagcctactaactaccatccaatgggtcgcactgtctaccctcatattgatcaccatagcggctgataactactcatcatcctctagcccaatctttctaaattgtggagcctccaccatgcaacttgatatcaataatcggagttgggagggggacactagatccaagtttgcatcagcaatgaatggaattgcagctagtgctacataccaagacccttcactcccatctcttgtgccttacatgacatcccgtatattcatttcaaattacacctattccttcccaattagcccagggcggatattcgtgcgcctttacttctatccagtggcctatggctactatgcttctgaagatgcttactttggtgtcaaaacaaacaatttgattcttttagacaacttcaatgcttcacaaactgctcaggcagcaaactatgcctacatccttcgagaattctcgctgaacgtcactttaggtagtctagacctcacctttttcccatccacacagaatggttcttatgcatttgtgaatgggattgagattgtgcccacgcctgacatcttcacaacacgaacacctacacataacaccgaagggaaccttgatccatccgatatagattctatgaccagtttccaaacgatgtaccgtctcaatgttgggggccaggcgatcattccacaaggtgattctaggttctatcgttcatgggaggatgactctccatacatatatggtgctgcctttggggtgaccttcggcaaagatagtaatgtcaccatcacatatccaggtactatgccaaactacactgcacctgctgatgtgtatgcaacagcacgatcaatgggcccaaattggcagatcaacctgaactacaatcttacatggatcttatcggttgacgcagggttttactacctcttaaggttccatttctgtgagatccagtatcctataaccaagatgaatcagaggtcattcttcatttacatcaataatcagacggtgcaggatcaaatggatgttattcgttggagtggaggaattggcatggcaacatatgctgactatcttatcgtcacagttggttccggtcagatggatttgtgggttgcacttcatcctgatctttcaagtagaccacagtattatgatgcaatactaaatggccttgaggtcttcaagctatgggacattgggaaaaaaaaccttgctgggcttaaccctccacttccaccacaaccaaagactgatgtgaaccctaaaggggtgtctggtggagggaaattaaaggctgctgtcccagcagccatatgtgccgtggttgtgctgattacagcttgtttttgtgtgtgcatcatctgtagacgaaagaaagtggcaaagcattctggcaagactgacaaaaagtgcttgacttatcaaactgaattatacaaatcaccatcaaatctttgtcggaacttcaccttccatgaaatgcaaatagcaactagtagctttgatgaaacccttctgcttggtagaggtggatttggtgatgtgtaccgtggagagatagataatggtacaacggtggcgatcaaacggagcaacccattgtccctgcagggtgttcatgagttccagaccgagattgagacgctgtccaaggtcagacatggccatcttgtgtctctaatcggatactgccaggaaaaaaatgagatgattttggtgtatgaatacatggcccgtggaacacttcgggagcacctgtacagcaccaagaggccaccattaccatggaaggagcgcctcaagatctgcattggtgcagcccgagggctgtattacctgcacacgggcccgaaagaaacaatcatccatcgtgacgtgaagactgccaacattctactagatgacaagtgggtggcaaaggtttcagactttgggttgtccaaggttaatccggacattgacgccacccatgttagcactgttgtgaagggtacattcggatatttcgaccctgagtattttcggttgaagcaacttacccaaaggtcagatgtgttctcttttggggttgtgttgtttgagatcctgtgcgctcgccctccagtaaacactgagcttccagaagagcaagtgagcttgcgtgaatgggcattgtcttgcaagaagataggcactcttggtgaaattatagatccctatcttcagggagaaatcgctcctgattgcctcaagaagtttgctgattgtgcagaacaatgtgttgctgatcgaagcatcgacaggccagagatgggtgatgttcttcggaacctagaggttgctctgaagatgcaggagtgtgcagagaacaatagcaaattcagtgaagaaacaacatcgtcgaagacaacaccagacatgatgaccatcatggatactgacaaacaatccacctactcgacaatgagcatcactggacaaaggaccatattctctgatatgatggatccgcaggcccgatgaaacacaacagttaatgtttcaactaatttcagatccatagttcatgtcctggtgatcttttgatcgcaatcactctagtatgttgaataattagttgtttcagatttttcatactagttccaaatctaagcatagttagacttatcaagtaaataattctgcataccatttttaagaagtaatgctactgtttgagtggtt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0317700, RefSeq:Os05g0317700