Os05g0318300

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Revision as of 10:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0318300| Description = Ribonuclease III domain containing protein| Version = NM_001061717.1 GI:115463164 GeneID:4338401| Length = 2581 bp| ...")
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Gene Name

Os05g0318300

Description

Ribonuclease III domain containing protein

Version

NM_001061717.1 GI:115463164 GeneID:4338401

Length

2581 bp

Definition

Oryza sativa Japonica Group Os05g0318300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:14748327..14750907

Sequence Coding Region

14748335..14748542,14748831..14748955,14749166..14749255,14749535..14749587,14749884..14749986
,14750129..14750244,14750325..14750373

Expression

GEO Profiles:Os05g0318300

Genome Context

<gbrowseImage1> name=NC_008398:14748327..14750907 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:14748327..14750907 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctaccaccgccgcgacgaccatggtggcggcggtgcaccacccccgcccctgcttccgcgtgcgcgccgcctgggacatgaacccgagcgcctcccccaagcccaaggccaagcccccgcctcccccgccgccgccgttgccgaccgcccccgcccccacccacgccgacctcttcgcccgccacagcaacagcgagggccaagtgccaaagaagaccacaagtatgggatttgaaaggtggtggttaccacctccgccagaggtgaagaagccccgttcgctctacaacgctgcatcattggcgtacttgggggactgcatatatgaactttatgctcggagacatttcttctttccaccactgagcatcaatgactacaacaagcgtgtaatggatgtcgtgaaatgtgaatcacaggaccttctgctgaacaaacttcttggagaagattttctaactcaagaagaaagggacatacttcgttggggaagaaatattgttagcagcaagacacgtaccagaaaacgtgctggaattgcagtttataatcgagcatcttcacttgagacactgattggatatctttacctcacaaatttcaagcgcttggagcaattgatgttccagttaggatttacaagtggtgcttcctcacatcatattgcagatgagctagtctcaggctttaagaaaaagaactccacttctgtacaatctcagcaacaagcagcgcagtga</cdnaseq>

Protein Sequence

<aaseq>MATTAATTMVAAVHHPRPCFRVRAAWDMNPSASPKPKAKPPPPP PPPLPTAPAPTHADLFARHSNSEGQVPKKTTSMGFERWWLPPPPEVKKPRSLYNAASL AYLGDCIYELYARRHFFFPPLSINDYNKRVMDVVKCESQDLLLNKLLGEDFLTQEERD ILRWGRNIVSSKTRTRKRAGIAVYNRASSLETLIGYLYLTNFKRLEQLMFQLGFTSGA SSHHIADELVSGFKKKNSTSVQSQQQAAQ</aaseq>

Gene Sequence

<dnaseqindica>9..216#505..629#840..929#1209..1261#1558..1660#1803..1918#1999..2047#gtccacacatggctaccaccgccgcgacgaccatggtggcggcggtgcaccacccccgcccctgcttccgcgtgcgcgccgcctgggacatgaacccgagcgcctcccccaagcccaaggccaagcccccgcctcccccgccgccgccgttgccgaccgcccccgcccccacccacgccgacctcttcgcccgccacagcaacagcgagggccaaggtaatctccatccctcctctccgctttcccaaaccgctggaagcttatgagaatattgtgtgcttaggtggtagtggcgctgaaccactatatatgacatctactgaatgtgtcttaatacaatttctatgaaatgattatgtagagttattgtcttcgattgtcaagagcaatagaatggttgtgccatctgtgtctctgtaatcggtttgttctagtgtgtgtagttgaaatggttggtctgaaaatgtctgaatttgatcgatggtttgttgctttggtttgcagtgccaaagaagaccacaagtatgggatttgaaaggtggtggttaccacctccgccagaggtgaagaagccccgttcgctctacaacgctgcatcattggcgtacttgggggactgcatatatgaagtgagaaacagtttgactcaattgtggttatgcactgaaaattgttattatgtaattttattacatatagctcagcctatttgtcacttctatttgtattggattagtaagagataagatggtgcatataacgtgcacaaaactttcaacttcaggtctgtatactgtaggatgatctgataagaatggttctgctctttgattatgcagctttatgctcggagacatttcttctttccaccactgagcatcaatgactacaacaagcgtgtaatggatgtcgtgaaatgtgaatcacaggtttggatttggctcttcatctttctaatcaaatggatttgatagccagattcttcttattatctatctttttgggtctgtgctttgcataccttgatggacattgtctgctataagcaaaaatttactcaatgctttccatttttatggctgttgttttcaattctaaagggcagttctcttgtttgttatttttctgttctgtttgctacatgataatcacacaataagtatatcaaatattatttacattatttttggttattttcctttattcaggaccttctgctgaacaaacttcttggagaagattttctaactcaagaagaaaggtaaaccaataattctagccttctgccagatgtaaaatatatgctaatgataaaattcttatcaggaaattttatgctctagtgcccgtgtacatgactgaacttttatgggatgttagccctttagtgtccactgtccaggacttgtaaattcatctatctaggacttgtcttttgttgtaggccatctgttcttttatttttggatttttatagtgtttgatactatcttctgtgtccgatgctgatatcaatgtgcgcatgcttcagaagtactgaatttccttattctgcagggacatacttcgttggggaagaaatattgttagcagcaagacacgtaccagaaaacgtgctggaattgcagtttataatcgagcatcttcacttgagacactggtgtgttccactatagactaattaatgattgctatattggggaaaaatcaactctaagctgcaacttctgttgtactaccctcacactacttttgttgagaagactaatccttgcgttgttggttggtatttctattattagattggatatctttacctcacaaatttcaagcgcttggagcaattgatgttccagttaggatttacaagtggtgcttcctcacatcatattgcagatgagctagtctcaggctttaagtaatgcatcgttggtttcttgtcatgtaattaaggtatttcatcttgactttctgttactaacggataaccattggcaggaaaaagaactccacttctgtacaatctcagcaacaagcagcgcagtgaatagtttctgtattgcagcaaacatggtatgatctaaacaatagttatctggtgaccacaaccagcacaaaaattcatttagttttggtgtatgacatccaaaagtggttgctcaatgaatgaatagcaattaccgtttgtctgtcaaacaagtatcgagtgaattgagcaatgtacatgtatgcaaatatcattcagtgcaagaaaatggtgtcacttccaggagggtgtggcggttctgatctgtagattctgaggtggcaagccgttgtgttattactactcattaggttgatataggtcgtggtatctttgacaccttgtgtatgaaggagctgcgaaactgcaagatatgctgaatgatttgatgcagagttttagcacgacttcagaattaacctgttctatgtgcttcatggattcagtgcactaccattatgagacagatgcctttgctttgctgtttgttgtgatctaatgtaaacaacacaatgtggaagtatttgaggccataagaaaagtggcagagttggt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0318300, RefSeq:Os05g0318300