Os05g0319800

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Revision as of 10:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0319800| Description = Similar to Plasma membrane H+ ATPase (EC 3.6.3.6)| Version = NM_001061721.1 GI:115463172 GeneID:4338405| Length = 45...")
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Gene Name

Os05g0319800

Description

Similar to Plasma membrane H+ ATPase (EC 3.6.3.6)

Version

NM_001061721.1 GI:115463172 GeneID:4338405

Length

4505 bp

Definition

Oryza sativa Japonica Group Os05g0319800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:14826150..14830654

Sequence Coding Region

14826535..14826816,14826916..14827098,14827179..14827936,14828030..14828435,14828542..14828667
,14828774..14828893,14829006..14829332,14829417..14829731,14829840..14829977
,14830068..14830166,14830257..14830547

Expression

GEO Profiles:Os05g0319800

Genome Context

<gbrowseImage1> name=NC_008398:14826150..14830654 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:14826150..14830654 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ctagggaccttgctgcgggggggcaaccatgtcggtctcactggaggatctcaagaaggagaacgtcgacctcgtcagtgttcttcatcattccgccaatattgcgttcatccgtgtgtgcgtgtgatccgtgtgtcattgtggcgttgttggttggttggttggttgcaggagagtataccgatccaggaggtgttcgccgtgctcaagagctcgccgcaggggctcacctccgccgatggcaacggccggctcgagatcttcggccgcaacaagctcgaggagaagaaggagagtaagctgctcaagttcttggggttcatgtggaatccgctctcctgggtcatggaggccgccgcgatcatggccatcgccctcgccaacggaggggggcggccgccggactggcaggacttcgtcgggatcgtgacgctgctcttcatcaactccaccatcagcttcatcgaggagaacaacgccgggaacgccgccgccgcactcatggccagcctcgcgccgcagaccaagttgctgagggacgggaagtggtcggagcaggacgcggcgatcctggtgcccggggacatcatcagcatcaagctcggcgacatcatcccggcggacgcgcggctgatggagggcgacccgctcaagatcgaccagtcggcgctcaccggcgagtcgctccccgtcaacaagatgcccggcgacagcatctactcgggttccacctgcaagcagggcgagattgaggccgtcgtcatcgccaccggcgtccacaccttcttcggcaaggccgcccacctcgtcgacagcaccaacaacgtcggccatttccagaaggtgctgacggcgatcggcaacttctgcatctgctccatcgcggccgggatgctgatcgagatcatcgtgatgtacccgatccagcaccggcagtaccgcgacggcatcgacaacctcctcgtgctgctcatcggcgggatacccatcgccatgcccaccgtgctgtccgtgaccatggccatcggctcgcaccggctgtcgcagcagggcgccatcaccaagcggatgacggccatcgaggagatggccggcatggacgtgctctgcagcgacaagaccggcacgctcaccctcaacaagctcaccgtcgacaagaacatgatcgagccgttcgtgaaggatctcgacaaggacgcgatcgtcctgtacgcggcgagggcgtcgcgaaccgagaaccaggacgccattgacgcctccatcgtcggcatgctcgccgacccaagcgaggcccgtgccggcatccaagaggtgcacttcatgccgttcaaccccgtcgacaagcgcacggccatcacctacatcgacaccaaagatggttcgtggcaccgcatcagcaaaggcgcgccggagcagatcatcgagctgtgccgtctacgggacgacgtgagccggcgggtgcacgccatcatcgacaagttcgccgaccgcgggctgcggtcgctggcggtggcgaggcagaaggtgccggaggggagcaaggacgcgccgggcacgccgtggcagttcctcgccgtgctcccgctcttcgacccgccgcgccacgacagctccgagaccatccgtcgcgcgctcaacctcggcgtcaacgtcaagatgatcaccggcgaccagctcgccatcggcaaggagaccggccgccgcctcggcatgggcaccaacatgtacccctccagctctctgctcaaagacggcgacaccggcggcctccctgtcgacgagctcatcgagaaggccgacggcttcgccggcgtcttccccgagcacaagtacgagatcgtgcggaggctgcaggagaggaagcacatctgcgggatgacgggggacggcgtgaacgacgcgccggcgctgaagaaggcggacatcgggatcgcggtggcggacgcgacggacgcggcgaggggggcgtcggacatcgtgctgacggagcccgggcttagcgtgatcatcagcgcggtgctgacgagccgcgccatcttccagcggatgaagaactacaccatctacgccgtgtcgatcaccatccgcgtcgtgctcggcttcctcctcctggcgctcatctggaggttcgacttcgcgcccttcatggtgctcatcatcgccatcctcaacgacggcaccatcatgaccatctccaaggaccgcgtcaagccgtccccgttgcccgacgcatggcgcctccaggagatcttcgccaccggcatcgtcctcggcacctacctcgccctcgccaccgtcctcttcttctgggccgtccgcgacaccgacttcttcacggtgaccactcatcacccaacctcgcacgcctcgccgccgcgcgctctgacgccgtgtgtttgtgggcagaggacgttcggggtgcacccgatcggaggcagcacggaggagctgatggcggcggtgtacctccaggtgagcatcatcagccaggcgctcatcttcgtgacacgcgcgaggagctggttcttcgtcgagcgcccagggctcctgctcgtcggcgcgttcctcatcgcccagctgatggcaacgctgatcgcggtgtacgcgaactggccgttcgcgaagatgaagggcatcgggtggtcgtggggcatggtcatctggctcttcagcatcgtcaccttcttccccctcgacatcttcaagttcgccatccgctacttcctcagcggcaaagcctggaacaacgccttcgacaacaagacggcgttcgcgaacgagctggactacgggaagagcaagagggaggcgcagtgggcgatcgcgcagaggtcgctgcacgggctgcagcaggcggagacgtcgacggcgctgttcgacgacaacaaggactacctggagctgtcggagatcgcggagcaggcgaagcgccgcgccgagatcgccaggctacgggagctgcacacgctcaagggccacgtcgagtcggtggtcaagctcaagggcctcgacatcgacaccatccagaaccactacaccgtctag</cdnaseq>

Protein Sequence

<aaseq>LGTLLRGGNHVGLTGGSQEGERRPRQCSSSFRQYCVHPCVRVIR VSLWRCWLVGWLQESIPIQEVFAVLKSSPQGLTSADGNGRLEIFGRNKLEEKKESKLL KFLGFMWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGIVTLLFINSTISFIEENNA GNAAAALMASLAPQTKLLRDGKWSEQDAAILVPGDIISIKLGDIIPADARLMEGDPLK IDQSALTGESLPVNKMPGDSIYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNV GHFQKVLTAIGNFCICSIAAGMLIEIIVMYPIQHRQYRDGIDNLLVLLIGGIPIAMPT VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNMIEPF VKDLDKDAIVLYAARASRTENQDAIDASIVGMLADPSEARAGIQEVHFMPFNPVDKRT AITYIDTKDGSWHRISKGAPEQIIELCRLRDDVSRRVHAIIDKFADRGLRSLAVARQK VPEGSKDAPGTPWQFLAVLPLFDPPRHDSSETIRRALNLGVNVKMITGDQLAIGKETG RRLGMGTNMYPSSSLLKDGDTGGLPVDELIEKADGFAGVFPEHKYEIVRRLQERKHIC GMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQR MKNYTIYAVSITIRVVLGFLLLALIWRFDFAPFMVLIIAILNDGTIMTISKDRVKPSP LPDAWRLQEIFATGIVLGTYLALATVLFFWAVRDTDFFTVTTHHPTSHASPPRALTPC VCGQRTFGVHPIGGSTEELMAAVYLQVSIISQALIFVTRARSWFFVERPGLLLVGAFL IAQLMATLIAVYANWPFAKMKGIGWSWGMVIWLFSIVTFFPLDIFKFAIRYFLSGKAW NNAFDNKTAFANELDYGKSKREAQWAIAQRSLHGLQQAETSTALFDDNKDYLELSEIA EQAKRRAEIARLRELHTLKGHVESVVKLKGLDIDTIQNHYTV</aaseq>

Gene Sequence

<dnaseqindica>3839..4120#3557..3739#2719..3476#2220..2625#1988..2113#1762..1881#1323..1649#924..1238#678..815#489..587#108..398#acagatccaacaaacgcccaaagaaaaagtcttttgagatacacaccaatgagcctaactgactagctagcgatcgaaacaccctgctccagatcgatctggcctagctagggaccttgctgcgggggggcaaccatgtcggtctcactggaggatctcaagaaggagaacgtcgacctcgtcagtgttcttcatcattccgccaatattgcgttcatccgtgtgtgcgtgtgatccgtgtgtcattgtggcgttgttggttggttggttggttgcaggagagtataccgatccaggaggtgttcgccgtgctcaagagctcgccgcaggggctcacctccgccgatggcaacggccggctcgagatcttcggccgcaacaagctcgaggagaagaaggtcagaattcagaatcgtgtgttcgatcaagaacgagtttgtgtgttttgggtctcgcgtacgtataaaatatgtgaaattggcatgcaggagagtaagctgctcaagttcttggggttcatgtggaatccgctctcctgggtcatggaggccgccgcgatcatggccatcgccctcgccaacggaggggtacgcgtcgcccgtccccgtcgccgtcgcgtcagttgtgtgtgttttgaccgccgtcgatctgacgcgtgcatgcatgcgtgcgtgcaggggcggccgccggactggcaggacttcgtcgggatcgtgacgctgctcttcatcaactccaccatcagcttcatcgaggagaacaacgccgggaacgccgccgccgcactcatggccagcctcgcgccgcagaccaaggcacgtcgcgcgtgcgcagtgcgccacgccatggacgaacactgacctatctgtgctcgacggaatgactgactgactgactgactgatcgatggtcggtgcatgcagttgctgagggacgggaagtggtcggagcaggacgcggcgatcctggtgcccggggacatcatcagcatcaagctcggcgacatcatcccggcggacgcgcggctgatggagggcgacccgctcaagatcgaccagtcggcgctcaccggcgagtcgctccccgtcaacaagatgcccggcgacagcatctactcgggttccacctgcaagcagggcgagattgaggccgtcgtcatcgccaccggcgtccacaccttcttcggcaaggccgcccacctcgtcgacagcaccaacaacgtcggccatttccagaaggtatcatgcatgcatccatccgccacttctcgtcggagaggtgccaactgcttgcttgctctgctcaccatcaatggtggtcaggtgctgacggcgatcggcaacttctgcatctgctccatcgcggccgggatgctgatcgagatcatcgtgatgtacccgatccagcaccggcagtaccgcgacggcatcgacaacctcctcgtgctgctcatcggcgggatacccatcgccatgcccaccgtgctgtccgtgaccatggccatcggctcgcaccggctgtcgcagcagggcgccatcaccaagcggatgacggccatcgaggagatggccggcatggacgtgctctgcagcgacaagaccggcacgctcaccctcaacaagctcaccgtcgacaagaacatgatcgaggcacgcacagcacacaccattaatctttcagttttgccgttaatttttttccctatcgatcgagtagtagttgtcatcaaatcaaatcgcgcactttggatttggatttcagccgttcgtgaaggatctcgacaaggacgcgatcgtcctgtacgcggcgagggcgtcgcgaaccgagaaccaggacgccattgacgcctccatcgtcggcatgctcgccgacccaagcgaggtaagtgaagctcctcaagctcgcacggacacatcacacaagctcccaatttcctcttcttctacaaataaatctcacgacgtacgacgtgtctggaacgtggcaggcccgtgccggcatccaagaggtgcacttcatgccgttcaaccccgtcgacaagcgcacggccatcacctacatcgacaccaaagatggttcgtggcaccgcatcagcaaaggcgcgccggagcaggtcagccggccggccggccaccgtcagctcagccatgaattctgtaccatttgcattgcatcggtgaatttgatcttgttggtgtgcgtgtgtgtgtgtggcttagatcatcgagctgtgccgtctacgggacgacgtgagccggcgggtgcacgccatcatcgacaagttcgccgaccgcgggctgcggtcgctggcggtggcgaggcagaaggtgccggaggggagcaaggacgcgccgggcacgccgtggcagttcctcgccgtgctcccgctcttcgacccgccgcgccacgacagctccgagaccatccgtcgcgcgctcaacctcggcgtcaacgtcaagatgatcaccggcgaccagctcgccatcggcaaggagaccggccgccgcctcggcatgggcaccaacatgtacccctccagctctctgctcaaagacggcgacaccggcggcctccctgtcgacgagctcatcgagaaggccgacggcttcgccggcgtcttccccggtacgttcccagtgaccttcacaagtacaagatggaaaagcgaagccatggcgcagaactgatgatgaactgatgatgatgatgatgatgcagagcacaagtacgagatcgtgcggaggctgcaggagaggaagcacatctgcgggatgacgggggacggcgtgaacgacgcgccggcgctgaagaaggcggacatcgggatcgcggtggcggacgcgacggacgcggcgaggggggcgtcggacatcgtgctgacggagcccgggcttagcgtgatcatcagcgcggtgctgacgagccgcgccatcttccagcggatgaagaactacaccatctacgccgtgtcgatcaccatccgcgtcgtgctcggcttcctcctcctggcgctcatctggaggttcgacttcgcgcccttcatggtgctcatcatcgccatcctcaacgacggcaccatcatgaccatctccaaggaccgcgtcaagccgtccccgttgcccgacgcatggcgcctccaggagatcttcgccaccggcatcgtcctcggcacctacctcgccctcgccaccgtcctcttcttctgggccgtccgcgacaccgacttcttcacggtgaccactcatcacccaacctcgcacgcctcgccgccgcgcgctctgacgccgtgtgtttgtgggcagaggacgttcggggtgcacccgatcggaggcagcacggaggagctgatggcggcggtgtacctccaggtgagcatcatcagccaggcgctcatcttcgtgacacgcgcgaggagctggttcttcgtcgagcgcccagggctcctgctcgtcggcgcgttcctcatcgcccagctggtaagaagttcgttagccgccgccgccgcggcgcgcgcagtgactcttctccggcgactaatggcggcgaacgcacgcagatggcaacgctgatcgcggtgtacgcgaactggccgttcgcgaagatgaagggcatcgggtggtcgtggggcatggtcatctggctcttcagcatcgtcaccttcttccccctcgacatcttcaagttcgccatccgctacttcctcagcggcaaagcctggaacaacgccttcgacaacaaggtaaacacggagacacggattctaatcacccgggtggacgtccacccatttatcgcatgttaattataggaatgagtttggtcgattgcgcgcgagcagacggcgttcgcgaacgagctggactacgggaagagcaagagggaggcgcagtgggcgatcgcgcagaggtcgctgcacgggctgcagcaggcggagacgtcgacggcgctgttcgacgacaacaaggactacctggagctgtcggagatcgcggagcaggcgaagcgccgcgccgagatcgccaggctacgggagctgcacacgctcaagggccacgtcgagtcggtggtcaagctcaagggcctcgacatcgacaccatccagaaccactacaccgtctagctagcaccatcgatctcacacgcatgaataccatacatgatcgatgatgctgctcgttagcttgataagtgagacaggatattctttttttttctttttttttggcagcttaatttaacggggtcaggagactgtcttaatttggtcagatgaataatgggggtacgtagcttttgttgttttaatggttttactttggagaggttgtaggtttgttggtacgtttgattggtcgaagaccagaataaaatgagggctaatttagtactttgtttgtgcatatgttgaagaatccatcagccttttcctaatgtttcaaactaagttttagcatgtactaattgttcttaggtaacactctttttaattccttgaggggatattc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0319800, RefSeq:Os05g0319800