Os05g0319900
| Gene Name |
Os05g0319900 |
|---|---|
| Description |
Similar to (1,4)-beta-xylan endohydrolase, isoenzyme X-II (EC 3.2.1.8) (Fragment) |
| Version |
NM_001061722.1 GI:115463174 GeneID:4338406 |
| Length |
1851 bp |
| Definition |
Oryza sativa Japonica Group Os05g0319900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:14832257..14834107 |
| Sequence Coding Region |
14832257..14833387,14833493..14834107 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:14832257..14834107 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:14832257..14834107 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcttgcactagggaggttgctttcggcgtgaacctgatcggcaacaacggcgccgcaccggcggacgaggccagcagcctcgccggctgggcgccggtcggctcgcgcaccacgctgtccgctcacgtcgagaaggacgacccgccggcggccatgctcccggctgtggacgacggcgggcgcgagcaccggccgagcggctctcggtacgtcctcgcggcgcgccgtgacggcgaggaggacgggctgcggcacccggtcccggccggcgcgctcgtgccccgggtgacgtaccgtgtcgccgggtgggtcgccgtgcagagcggtggcggcgaacacgccggcggggagagccacgtggtgcgtgtcagcctccacgtggacgatggcggcgagtgccgcgttctcggctgcggcgcggtgtgcgccggagtggccggcggctgggtggagatcaacggcgcgttccgccttaaggcgaccccgcgcggcgcgacggcggtgcacgtccacggcgcgccagccggcgtcgacgtgaagctcatggacctccgtgtgttcgccgccgaccgcaaggcgcggttcaggcatctcaaggagaagaccgacaaggttcgcaagcgtgacgtcgtcctcaagttcagcggcggagccggagtggaggcgacggcgagcatccccggcgcggccgtccgcgtggtgcagatggacaacgtcttcccgctcggcacctgcatcaacggctcggtgatccaggaccccaacttcgtggacttcttcaccaacaacttcgactgggccgtcttcgagaacgagctcaagtggtactggacggaggcgcagcgcggcctgctcaactaccgcgacgccgacgcgctgctcgacttctgcgaccgccacggcaagccggcgcgcggccactgcatcttctgggcggtcgacggctccgtgcagcagtggatcaaggacctcggccgcgacgacctcgcgtcggcggtgcgcggccgcctcaccggcctcctgtcccgctacgccggccgcttcccgcactacgacgtcaacaacgagatgctgcacggccgcttctaccgcgaccgcctcggcgacgacgccgccgcgctcatgttccgcgaggccgcgcgcctggacccggccgcgcggctcttcgtcaacgactacaacgtcgagtgcgccaacgaccccaacgcgacgcccgagaagtacatcgagctgatcgacgcgctccgccgcggcggcgcggcggtgggcggcgtcggcatccagggccacgtctccaacccgtccggcgaggtcatctgcggcgcgctcgacaagctcgccgcgtcgacggggctccccatctggatcaccgagctggacgtgagcgagcccgacgtgtccctccgcgccgacgacctggaggtggtgctccgcgaggcgtacgcgcacccggccgtcgccggcgtcgtgctctggggtttcatgcagggccgcatgtggcgccaggacgcgtccctcgtcgacgccgacggcaccgtcaacgaggccggccagaggctggtcaatctccggcgggagtggacgtccgacgcgcgcgggaccatcgacggcgacggccatttcacgttcaggggctaccatggcacgtacgtcgtgcaggtgacgacggcgacggggaagatactcaagacgttcaccgtcgacaaaggggacacctcgctcgtgctggatatggaaatttaa</cdnaseq> |
| Protein Sequence |
<aaseq>MACTREVAFGVNLIGNNGAAPADEASSLAGWAPVGSRTTLSAHV EKDDPPAAMLPAVDDGGREHRPSGSRYVLAARRDGEEDGLRHPVPAGALVPRVTYRVA GWVAVQSGGGEHAGGESHVVRVSLHVDDGGECRVLGCGAVCAGVAGGWVEINGAFRLK ATPRGATAVHVHGAPAGVDVKLMDLRVFAADRKARFRHLKEKTDKVRKRDVVLKFSGG AGVEATASIPGAAVRVVQMDNVFPLGTCINGSVIQDPNFVDFFTNNFDWAVFENELKW YWTEAQRGLLNYRDADALLDFCDRHGKPARGHCIFWAVDGSVQQWIKDLGRDDLASAV RGRLTGLLSRYAGRFPHYDVNNEMLHGRFYRDRLGDDAAALMFREAARLDPAARLFVN DYNVECANDPNATPEKYIELIDALRRGGAAVGGVGIQGHVSNPSGEVICGALDKLAAS TGLPIWITELDVSEPDVSLRADDLEVVLREAYAHPAVAGVVLWGFMQGRMWRQDASLV DADGTVNEAGQRLVNLRREWTSDARGTIDGDGHFTFRGYHGTYVVQVTTATGKILKTF TVDKGDTSLVLDMEI</aaseq> |
| Gene Sequence |
<dnaseqindica>721..1851#1..615#atggcttgcactagggaggttgctttcggcgtgaacctgatcggcaacaacggcgccgcaccggcggacgaggccagcagcctcgccggctgggcgccggtcggctcgcgcaccacgctgtccgctcacgtcgagaaggacgacccgccggcggccatgctcccggctgtggacgacggcgggcgcgagcaccggccgagcggctctcggtacgtcctcgcggcgcgccgtgacggcgaggaggacgggctgcggcacccggtcccggccggcgcgctcgtgccccgggtgacgtaccgtgtcgccgggtgggtcgccgtgcagagcggtggcggcgaacacgccggcggggagagccacgtggtgcgtgtcagcctccacgtggacgatggcggcgagtgccgcgttctcggctgcggcgcggtgtgcgccggagtggccggcggctgggtggagatcaacggcgcgttccgccttaaggcgaccccgcgcggcgcgacggcggtgcacgtccacggcgcgccagccggcgtcgacgtgaagctcatggacctccgtgtgttcgccgccgaccgcaaggcgcggttcaggcatctcaaggagaagaccgacaaggtaagacaacatctctcactctgaatgatcacattaactaacaatatagtaccatgcatgttgatcgggaccatgtcatattcacatcggatttggccatttcaggttcgcaagcgtgacgtcgtcctcaagttcagcggcggagccggagtggaggcgacggcgagcatccccggcgcggccgtccgcgtggtgcagatggacaacgtcttcccgctcggcacctgcatcaacggctcggtgatccaggaccccaacttcgtggacttcttcaccaacaacttcgactgggccgtcttcgagaacgagctcaagtggtactggacggaggcgcagcgcggcctgctcaactaccgcgacgccgacgcgctgctcgacttctgcgaccgccacggcaagccggcgcgcggccactgcatcttctgggcggtcgacggctccgtgcagcagtggatcaaggacctcggccgcgacgacctcgcgtcggcggtgcgcggccgcctcaccggcctcctgtcccgctacgccggccgcttcccgcactacgacgtcaacaacgagatgctgcacggccgcttctaccgcgaccgcctcggcgacgacgccgccgcgctcatgttccgcgaggccgcgcgcctggacccggccgcgcggctcttcgtcaacgactacaacgtcgagtgcgccaacgaccccaacgcgacgcccgagaagtacatcgagctgatcgacgcgctccgccgcggcggcgcggcggtgggcggcgtcggcatccagggccacgtctccaacccgtccggcgaggtcatctgcggcgcgctcgacaagctcgccgcgtcgacggggctccccatctggatcaccgagctggacgtgagcgagcccgacgtgtccctccgcgccgacgacctggaggtggtgctccgcgaggcgtacgcgcacccggccgtcgccggcgtcgtgctctggggtttcatgcagggccgcatgtggcgccaggacgcgtccctcgtcgacgccgacggcaccgtcaacgaggccggccagaggctggtcaatctccggcgggagtggacgtccgacgcgcgcgggaccatcgacggcgacggccatttcacgttcaggggctaccatggcacgtacgtcgtgcaggtgacgacggcgacggggaagatactcaagacgttcaccgtcgacaaaggggacacctcgctcgtgctggatatggaaatttaa</dnaseqindica> |
| External Link(s) |
