Os05g0321900

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Revision as of 10:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0321900| Description = DNA-binding WRKY domain containing protein| Version = NM_001187420.1 GI:297723970 GeneID:9266067| Length = 4721 bp| ...")
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Gene Name

Os05g0321900

Description

DNA-binding WRKY domain containing protein

Version

NM_001187420.1 GI:297723970 GeneID:9266067

Length

4721 bp

Definition

Oryza sativa Japonica Group Os05g0321900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:14925897..14930617

Sequence Coding Region

14925897..14926507,14927483..14927614,14930074..14930617

Expression

GEO Profiles:Os05g0321900

Genome Context

<gbrowseImage1> name=NC_008398:14925897..14930617 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:14925897..14930617 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcacgtctttgcaccgcaccaggtgaccccgttgtcggtgttgctcgctgctgctgctggtggtggtttcgatcgccgtgatcggagcagggttgtcggcggcggcggcggcggccgagagggttgggagatggacgaggtgctggcgcagatcagcgaggggttccggctcgccggcgagctgatgtcggagctcgcggcgacccagaacgacccggactacctggccgcgcgctgccacgccattgccggcgcgtacgccgccgcggcgcgcgtgctgcagggggcgcgccacggcggcggcggcgtgggcgcggcgtcgacgtcgttcggcggcgagggatacctccatcaccagcatcgccagcagttggacctcctccgcatgtacgtcggcggcacggcgccggacgaagccgccgccgccgccaacccgttcctcggcggcggcggcggcgcaacaacggcggcgttccgcgcgccgtccgacgcgtacggcggcgcgggcgccggcacgtcgggtggcccggtgaggcgggtgtcgtcgtcgtcgcgctcgccgccgtcgccggtccagccgcgccagggcggcgccggcagcaggaggaggagggagagcggggagaaggtgacggtgatggtggcggcacagcggacggggaacacggagcagccgccggatgacgggtacacgtggcgcaagtacggccagaaggacatcctcggctccagatatcccaggagctactaccggtgcactcacaagaactactacgggtgcgaggcgaagaagaaggtgcagcggctggacgacgaccccttcacctacgaggtcacctactgcggcaaccacacctgcctcacctccaccacgccgctgctcacactccccgccgccgccgccacttcggtgacaaactctccgaccgccgccgccgtgctcggccaggacttcgtcatggcgcccgccgccgatcagcagccgccccagcaccagcaggcgcagccgccgctgtccacgtccatccacctcggcatcggatggccgatgacgccggccagcctcgccggcgccgtaggcgagggaagcactagcactaccgccaccgcgccgcaggtgacgacaatgggcgccacggcggccggcggcggcggtgcagcagctagggacgcggaccattacccggtggcggacctcgccgacgtcatgttcaactccggcggcagcggcagcagcagcatcatggacggcattttttcttctcacgatcgacgtgataactga</cdnaseq>

Protein Sequence

<aaseq>MHVFAPHQVTPLSVLLAAAAGGGFDRRDRSRVVGGGGGGREGWE MDEVLAQISEGFRLAGELMSELAATQNDPDYLAARCHAIAGAYAAAARVLQGARHGGG GVGAASTSFGGEGYLHHQHRQQLDLLRMYVGGTAPDEAAAAANPFLGGGGGATTAAFR APSDAYGGAGAGTSGGPVRRVSSSSRSPPSPVQPRQGGAGSRRRRESGEKVTVMVAAQ RTGNTEQPPDDGYTWRKYGQKDILGSRYPRSYYRCTHKNYYGCEAKKKVQRLDDDPFT YEVTYCGNHTCLTSTTPLLTLPAAAATSVTNSPTAAAVLGQDFVMAPAADQQPPQHQQ AQPPLSTSIHLGIGWPMTPASLAGAVGEGSTSTTATAPQVTTMGATAAGGGGAAARDA DHYPVADLADVMFNSGGSGSSSIMDGIFSSHDRRDN</aaseq>

Gene Sequence

<dnaseqindica>1..611#1587..1718#4178..4721#atgcacgtctttgcaccgcaccaggtgaccccgttgtcggtgttgctcgctgctgctgctggtggtggtttcgatcgccgtgatcggagcagggttgtcggcggcggcggcggcggccgagagggttgggagatggacgaggtgctggcgcagatcagcgaggggttccggctcgccggcgagctgatgtcggagctcgcggcgacccagaacgacccggactacctggccgcgcgctgccacgccattgccggcgcgtacgccgccgcggcgcgcgtgctgcagggggcgcgccacggcggcggcggcgtgggcgcggcgtcgacgtcgttcggcggcgagggatacctccatcaccagcatcgccagcagttggacctcctccgcatgtacgtcggcggcacggcgccggacgaagccgccgccgccgccaacccgttcctcggcggcggcggcggcgcaacaacggcggcgttccgcgcgccgtccgacgcgtacggcggcgcgggcgccggcacgtcgggtggcccggtgaggcgggtgtcgtcgtcgtcgcgctcgccgccgtcgccggtccagccgcgccagggcggcgccggcagcaggaggaggtacatcactacgtcactcttccctctccgttggtgcgtgcgtgcgtcacccggtcgtcgtcgtggcgtacgctagggttaatcgattcgatcaggtcgaagcacgccatggccatggcccgcgcggcgcgcctgcgctactgtagttggtgaagtcttttggcggtcaagctgttcagacacgttgacctttaccacgtcgcgccgtgcatggcgcgcgcgcgcgcagctgggtcagaaagaaacgccaccgaattttcgtcgcactagccatatatccatctctccttctctcctctcctacctgcagtacaccaagccattaattaactatagactttagcttaactagtactaataccccgtaattaatactccctccgtttcgaaatgtttgacgccgttgactttttagtacatgttttaccgttcgtcttatttaaaaaatttaaataattattaattcttttcctatcatttgattcattgttaaatatatttttatgtaggcatataatattacatatttcacaaaagtttttgaacaagacgaacggtcaaacatgtgttaaaaagttaacggtatcaaacatttcgaaatggagggagtattgattttcttgttcgcggtgatggcgacggctaagcggcatatatgcagtccgaattgcttgccaagtcatggcgcttccgctttgcacacaagttacacgagggtttacacacaactacgagtactctacgaggtactgtgttctctgcggcgcatcagctgttaattagttgattactgaataggctgatcgatcggttaaattaacctgattagtgaattttcgtcatagatactcactctatatatcccaataaaaatcaaaattcattacactagattgtatcaaatctaattttaaattatagtttttatcaggtcgaagcgagtaaataattaactagatgatgtatgtgtatcaggagggagagcggggagaaggtgacggtgatggtggcggcacagcggacggggaacacggagcagccgccggatgacgggtacacgtggcgcaagtacggccagaaggacatcctcggctccagatatcccaggtaccacagaattactaatgtttaatttaatttaattttggaactctttaattttgcttatacttattttgttttgatattttcaaattgtattttaataacgtgtatcgtaatgggggctttgttgagtaaaactactatagcttttttttggaaagtaaaactatagctgattaattaaatatgatttggctggacatatttaggtctggcagtgtgtatggttggctaacattcgcatcttcatatcgatttttcttcacctttttttccgcttcctccactacaccagtagtattattgcatacacaaagcatcatatattcatatctttctgtttttgggaaaaagaaacatatactatagtacagtacacgtagcccgatcgatggctaatacgcaagtgtgtacgtatatactaactcaattagcaccgggggtatgaaagtccagcaacatatatacatgtgcacatttatatctatatctatatctatatcaatactattatacatgtgcacgtcatccatattgtttgagtcagtttttttaagtttatttgtttttggaaatacaaatctatgtttaagtcgatttttaagttcgttcaattttaaaaatacagaaggagtcgtataagaaatctcttttaaaaaaactcgcacactaatttgtgacaatcggactccaatttacagctcatgattttataaaaataatatacaagcgaattcgcacaattcaccataggtaaaccgtacaataataataagattaaaatagctttcacccgttgctatgcacgggtatttttttctagtatataatatatcgctaattgcaatgtcaaattcacttatggtatctaggaaaagatcgagcatgcgcgcagaataacctagtatcagttttctttcttttccacgtgagttttctttctttttttgaattagttggctttcagcatggtgtgggtccaattcaagtgaaccaagaatgcaacatatatatgcatatggttaactatattgttattttttgtaggaaaaatagatagctccatagtttactcttttagcttattagccgtatagctaaattttaaactttaaaagttaaattgtagaattgattttatttttttatcatagtttacttttaagtataggatttaattcactaagaacatataaataaagttttttcaatggattatttttttatcactaaaagtattatggcatataatcagttgtaaatgaaacgattaatggagatagaaaaatcttcgtggagataacctagcttgtgtattaatttgtgatgagcaagaaaccagttgctagattagctagcttgtcgtcgagtaattaatattaaagttcaacaaaagttgcctagaagaacttatatttgaaaatttaaaattatttggtcggtttactttacttgtcttgaaattgctatgtttatctgtacgtttacttacagagagaaattgaagagaccgagcgatgcaatggaaaatcaatcattattacatgccttggagagtttggcgttttattcaagaaaattcctgaagactttttttttcaattttgaaatattgaaataataactatagaatgatttcaacttttggtcgaattattaaatggtttgaaacaatttttttccgaggctaggtttcgaaataattgaaaaactgagttgccaaatgatcctaattaagtcacttctcaagtttaatgggccaagagtttttttaaaaaaacacactacttttcctttagtcttgctacaattcaaaactagtttaaacataatgcactttgcaatgtgtcagtgtcagtgaaacatcatagaaaccactctaaacgcaggcgaatgttgaaaagttacatctttttatcgttgacggtaaaaaagaatttctagtcttggccagtgaaaaaacattcaagtctttacgctaatggttaattttcaaatgtcacgaaaagtttaggtaataaaatagacaagttccgacgttgtttcctggaaacgtacaatcgatcacctttagctaaacagtctactgcttctggataaatatatatacaaccaatgtatatttatgtgttcattttcctgtaataattaaatggaagaccttcgtggataattaatgcatggcataaatttttaagaatattaagatactttaatcaaaatctgaaactgtggtgaactaattaacgattgttaccgcggaatttttgaaattaaattacgtataagttgtattacacacttaattatatatgtataattagtgtaattacattatgatttatgattgtattatgtttatatttaacgactgtattacagttatatctgttaaattttatcgataaatatatataagatagttccactaattaatatacgacaatatccgaaaattacaggagctactaccggtgcactcacaagaactactacgggtgcgaggcgaagaagaaggtgcagcggctggacgacgaccccttcacctacgaggtcacctactgcggcaaccacacctgcctcacctccaccacgccgctgctcacactccccgccgccgccgccacttcggtgacaaactctccgaccgccgccgccgtgctcggccaggacttcgtcatggcgcccgccgccgatcagcagccgccccagcaccagcaggcgcagccgccgctgtccacgtccatccacctcggcatcggatggccgatgacgccggccagcctcgccggcgccgtaggcgagggaagcactagcactaccgccaccgcgccgcaggtgacgacaatgggcgccacggcggccggcggcggcggtgcagcagctagggacgcggaccattacccggtggcggacctcgccgacgtcatgttcaactccggcggcagcggcagcagcagcatcatggacggcattttttcttctcacgatcgacgtgataactga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0321900, RefSeq:Os05g0321900