Os06g0162600

From RiceWiki
Revision as of 20:18, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0162600

Description

Similar to Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11 Mtase)

Version

NM_001063425.1 GI:115466581 GeneID:4340217

Length

4155 bp

Definition

Oryza sativa Japonica Group Os06g0162600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:3153275..3157429

Sequence Coding Region

3153492..3153644,3154117..3154176,3154390..3154437,3154528..3154616,3155032..3155080
,3155819..3155888,3156417..3156514,3157103..3157159,3157297..3157356

Expression

GEO Profiles:Os06g0162600

Genome Context

<gbrowseImage1> name=NC_008399:3153275..3157429 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:3153275..3157429 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagctgaagcagctggagggtctcctcggagacctgcagcagttcaccgcacccaaggtggagctggagcagtatgcaacgggccctcacatcgcgtcgcggatgctctacacggcggagaatagttttgatgacataactggcaaagtggtggctgactttggctgcgggtgtggcaccctgtctgtggcaagctctctgctggatgctgagcatgttgttggaattgatattgacccgcaatcccttgaacttgctcaagaaaatgctgcagatctagagctggatatcgacttaattcagtgtgatataaagaatttaaatttgagaggccttcttgttgacactgttgtcatgaatcctccctttgggacaagcagaaaaggagctgacatggaattcatttctatgggcatgaaggttgccactcgagctgtctattcgctacacaagacttctaccagagaacacatcaagaaggtagccttgcgcaactgcaatgccataagtgccgaggttctatgtgagctccgctacaacctaccacggacatacaagtttcacaaacaaaacgaggttgatatcgccgtcgatttttggcggttcgtgccacgagcccgagacgaaggtagcactgcatgctctgttaccaaccttaaacagagaagaatgcacagatga</cdnaseq>

Protein Sequence

<aaseq>MKLKQLEGLLGDLQQFTAPKVELEQYATGPHIASRMLYTAENSF DDITGKVVADFGCGCGTLSVASSLLDAEHVVGIDIDPQSLELAQENAADLELDIDLIQ CDIKNLNLRGLLVDTVVMNPPFGTSRKGADMEFISMGMKVATRAVYSLHKTSTREHIK KVALRNCNAISAEVLCELRYNLPRTYKFHKQNEVDIAVDFWRFVPRARDEGSTACSVT NLKQRRMHR</aaseq>

Gene Sequence

<dnaseqindica>3786..3938#3254..3313#2993..3040#2814..2902#2350..2398#1542..1611#916..1013#271..327#74..133#gggggagagagagagagagctccatcttccacggcgacgacgacggcggcggcggcggcgaggggaggaggagatgaagctgaagcagctggagggtctcctcggagacctgcagcagttcaccgcacccaaggtaaatttaccgccgccgcgcactcactttgccggcgtcttgtcttccgattcgcatcgccgcccaaagtggtggcgggaatatgtctgaccttttctgccgccgccgccggtggtggtggtggtcggtgggtgcaggtggagctggagcagtatgcaacgggccctcacatcgcgtcgcggatgctctacacggtagtagtagcatcctgttccgattccccgtgtagtttcctgctttgattttgtgctttatactagagtgtagatttttttttatcttttgctttggtcttcgaatacgatcctgctgttttttttcttccttttgtgatgtgagtggaattgggcgacgtcaagtgcagcagctttggttccatgtccaaaccgaccaagcagcataccagcagtagtaggttcatggctaagagtagagtggctcttcctctaggcatgtagcgatttcagacttcttagtgctttgaaattcttagaatagttgttattcatgtagttggtctttcgagcctttagttttgataagccatcatcgagtgtaaactttggcgatgtccatcgaagtagatactttggaggttctggtgtttcggcagatcacctatatttgcaggttgcaaccgttggcaatgtctacttttgtggtttgtcagtatcaagttgacaaatagtagatggctggcatgtgcgctgttcagatgctaacattcaagttgttctggtgtgctttttatctcgctcatagtgattccataaatccatcaggcggagaatagttttgatgacataactggcaaagtggtggctgactttggctgcgggtgtggcaccctgtctgtggcaagctctctgctggatgctgagtgagtatgtttaagatcttaagatttggacacccacatccttgggttttctttcttttgaccaactggtttcttctgtgttgatatttgtaaagatatcatttgttaactgtgcaaaggtgttgcccttttatattcaattcgactgaacatcatgtgacattgtcgcatattaacactcactgacctaaaatggagaatggttgtatctaaaatggagaactgtatggtgactgattgtgctgtctggatatgttttacccttgtttaagctttacctaataagtatatctgtccatgatgcttgtgtgttgatataccatcagttacagaacttagtggacagtaaatcaccacattagttcacctagccacttgctcaccacattagttacagaacttaagtgctcgtcgattagtattagaaacaagaaaatgaggttcatcactcagtatctttatgccttttgttgttatttgttcagttacaatttctaatcttatgtccctttggttgtgaaatcacaggcatgttgttggaattgatattgacccgcaatcccttgaacttgctcaagaaaatgctgcagatctagaggtatagcatttttttggttccgaatataaccattggtttagcctgaagttgaaaaatcttcacattgtctatgtaccctctcgttttcacctttttccagcatcctccttgcatcaccaccaaactatgcatgttattgtagtcataattttctgatagttctcatctgtatgtagtgcaaattgttaatggcgtcttcctgccaaatagcattgtggaaagttgtatgcttaaatcagctttctgcaactactgaaatgcactacaggtgttgatttttgttttcagttctccacatctgagatgttttttatattcaaatattgcagtttgcatttctttatatgtactactgccatggattatttttatcaatgcatcatagaaatttcataaatggcttagtatgcttcccttcttttgtaaagatgcaataattttgttctgttcaattgatctactaatctgtctagattatccttttaaatataggttttactgtctctgtctctattcatgttctttagtattagtggtcaaatttgcatggctaagcaaatgttggcaaagtagggctgaaagcagagactcagatttaatgtatcactccctctgtcccaaaatatagtagccataaacagctatatttttggacacagggatagttatttctaggatcagtaacaatacttgactatgtgaatgacatgtttcttttgttaaatgtttgatgtgcagctggatatcgacttaattcagtgtgatataaagaatttaaatttgagaggtattgtccttaaatgatgacatactctacctagtttaagtgcacctttagttcagttttttttttaattatttttctatataacctattgcttctgatcttctcatagtttttttttcacactgtttttttctgttgcatgttatttatttgttatttcatacataagtagatagcacctagagaagatatccagagtagtatcctagctgatgctactatacgagtcagctatttactttctctccagtacttcaatagcctgtgcaccattgttcaggtcaagaaagataatatagtgtcacaaaaaaaatgtgaatggttattgaaacaaaatcatatatttatacacataagcgtagatgctttcaacattgaaaagcttccctgatcttttagctacctgttgaagtaggccttcttgttgacactgttgtcatgaatcctccctttgggacaagcagaaaaggagctgacatggaattcatttctatgggcatgaaggtgagggcactgggcagcagttgccatcatacacatgactgagattattgcatgatgtttaaaatttttaatatctattgctatttgcaggttgccactcgagctgtctattcgctacacaagacttctaccagagaagtaagtgttcctcaaggggattacaaatgtcagaaacaatctctcttttattttattagattctgatgataaatgtttgattattcccttctctatttgcaacagtgtatttccaacaagaagtaaccatatttatcaatgttccatcttgtagttagcatggaagttttattaattgattttttgtccaccttttttgtgtctgatctttagcacatcaagaaggtagccttgcgcaactgcaatgccataagtgccgaggttctatgtgaggtaactaaatagatgctaggcgcttatcattttgtattgtgcatctaccccctaaaaatgttgttcagtatttcaatggggaagtagtaaataaattatcctgttaattttttttttgttttcttgcttccatttagactgaatcagacatttgggtatgagtaaagtttggaggaccaaatgtattcagtgcctgctagctgtaggaaatctgggcaaatagaatggtgaaatgcgatattgagctacctatgattttttaaaccatttttgcacctgttttctttatattatttgaaataccgggatataacacttgactagcaattctagttttgcttgaaatccggcaaaaagttgattggtttctagatgagtttattctacatttaaggctttacgggtcaaaacatatgttttctgtttccagttttgttcctgctatgataatctgtatttccctctgttccagctccgctacaacctaccacggacatacaagtttcacaaacaaaacgaggttgatatcgccgtcgatttttggcggttcgtgccacgagcccgagacgaaggtagcactgcatgctctgttaccaaccttaaacagagaagaatgcacagatgatcctaaaacattttcgtagcggttttttagcggttcagccgtgttgtgtcatctctcgcgcagttggccatgtgatgaacttggatcttttgattgcgaatttgtgattgcaacgaaggtatatgtgttcgtacaagtacaatgctcttttttttttcttttgaaagtggtcgtttaacattttgatgatgcgtaataatagtccatctctctgagc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0162600, RefSeq:Os06g0162600