Os05g0323100

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Revision as of 10:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0323100| Description = Rhodanese-like domain containing protein| Version = NM_001061728.1 GI:115463186 GeneID:4338414| Length = 2910 bp| D...")
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Gene Name

Os05g0323100

Description

Rhodanese-like domain containing protein

Version

NM_001061728.1 GI:115463186 GeneID:4338414

Length

2910 bp

Definition

Oryza sativa Japonica Group Os05g0323100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:14975672..14978581

Sequence Coding Region

14975698..14976060,14976502..14976753,14976841..14976939,14977057..14977350,14977898..14978278

Expression

GEO Profiles:Os05g0323100

Genome Context

<gbrowseImage1> name=NC_008398:14975672..14978581 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:14975672..14978581 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgccctccccaccactcgccgcgctctccaaagccgccgccgccgccgccgcccgccgcgccgccacggtcgccgcgcgcagccgccgccgcctcctcgtcctccccgctgtcgcctcgctggtaccggggccacctcctgtgctctgccgtcgcgtccgcctcatgccgcagctggagggcccgcgcgctcccccgccgccgcacggcaggggcttcgccgcggccgccgccggtggggatggggctacactggatgctggtgattcggagctggtggtggtctccttctacaggttcgccgacttccccgaccacgccgagctgcggtggccgctcaaggagctctgcgaggagttgcgtgtttcaggtggtattatccttgcgccggaagggatcaatggtagtatatgtggaacaccagaagctgtggagaaagtcttgaacttcattcaatcagacgaccgcttgaaagggttacggatgatccagtctcctgttactccggaagacgaggctatccatcatggacataccagtcaatctcctgttggtgctggggaagatgcacccttccggtgggatcatgtccgtgtgaaattgaaaaaggagatagtcgcacttggagatcccggtgtcatgccaactaaaacagttggaaaatatgttaagccaaaagactggaatgcattgataagtgacccagatactgttgttattgatgtgcgcaacatgtatgagatacgcataggaaaatttaagagagctgttgatccatgtacgaactcattcagagagttcccatcttgggttgatgatcagtttcaattggctgaatctgacagtcaactgtgctcagaaaataatgacaatacaattggcagacagtcggaagatgtgaattcaagcaaacccaaagagttaccacgagttgctatgtattgcactggtggcataagatgtgaaaaggcatcaagtttcctccttagcaagggctttaaagaggtttatcacttggagggtgggatattgaagtacctagaggaaatccccaaggcagaaagcttgtgggagggtgaatgctttgtgtttgacaaacgtgtctcagtggagcacggattagcccaaggaacccacaaactttgttatggatgtaagaaaccagttagtgatgaagacatggaatctcctgagtgggagtatggtgtatcatgtccatattgctttgcaaccaaatccgaggaggagaaggaaagggcaagggcacggcagagacagtttgagacatggggagttattggcggccctgataaaggaagaagtccaaaaaggctggaagctaatcacacagctgaagagcccaaacagttgtcgagctcagtctaa</cdnaseq>

Protein Sequence

<aaseq>MLPSPPLAALSKAAAAAAARRAATVAARSRRRLLVLPAVASLVP GPPPVLCRRVRLMPQLEGPRAPPPPHGRGFAAAAAGGDGATLDAGDSELVVVSFYRFA DFPDHAELRWPLKELCEELRVSGGIILAPEGINGSICGTPEAVEKVLNFIQSDDRLKG LRMIQSPVTPEDEAIHHGHTSQSPVGAGEDAPFRWDHVRVKLKKEIVALGDPGVMPTK TVGKYVKPKDWNALISDPDTVVIDVRNMYEIRIGKFKRAVDPCTNSFREFPSWVDDQF QLAESDSQLCSENNDNTIGRQSEDVNSSKPKELPRVAMYCTGGIRCEKASSFLLSKGF KEVYHLEGGILKYLEEIPKAESLWEGECFVFDKRVSVEHGLAQGTHKLCYGCKKPVSD EDMESPEWEYGVSCPYCFATKSEEEKERARARQRQFETWGVIGGPDKGRSPKRLEANH TAEEPKQLSSSV</aaseq>

Gene Sequence

<dnaseqindica>27..389#831..1082#1170..1268#1386..1679#2227..2607#gtccccctacatccccccaagcccaaatgctgccctccccaccactcgccgcgctctccaaagccgccgccgccgccgccgcccgccgcgccgccacggtcgccgcgcgcagccgccgccgcctcctcgtcctccccgctgtcgcctcgctggtaccggggccacctcctgtgctctgccgtcgcgtccgcctcatgccgcagctggagggcccgcgcgctcccccgccgccgcacggcaggggcttcgccgcggccgccgccggtggggatggggctacactggatgctggtgattcggagctggtggtggtctccttctacaggttcgccgacttccccgaccacgccgagctgcggtggccgctcaaggagctctgcgaggagttggtgagcgcttcatcatccagttagccacggataaggcttaacaatcacttcatccagtgtagtggatacacatttattattggataagctttaaagcttatggaggatgtgatacggttgcttattctttagttcatgcattgcttagcaaatgactgcttatggtggatgtgaaatgattgcttatattctttaattcgtggattgcttagcagatttcgattcattcaggtgctaagttgcaatgctatgtgtggatgaaccgttttactcgatgctattgttgacttgtcacaaattttcaacttccaaatttgctgtgcttagtgacagtactgaatggtgctgttcacaccgtgatggagttgactaatgcggtttatgtattgactgttttgtgaaatccaactctcacatgttgggctggctgatgctgttcagcgtgtttcaggtggtattatccttgcgccggaagggatcaatggtagtatatgtggaacaccagaagctgtggagaaagtcttgaacttcattcaatcagacgaccgcttgaaagggttacggatgatccagtctcctgttactccggaagacgaggctatccatcatggacataccagtcaatctcctgttggtgctggggaagatgcacccttccggtgggatcatgtccgtgtgaaattgaaaaaggaggtaagttggtttagaatgcatgacagttactggatttttcaattgtctgattattctgcttgttctgctttgttggccatttatcagatagtcgcacttggagatcccggtgtcatgccaactaaaacagttggaaaatatgttaagccaaaagactggaatgcattgataagtgacccagatactgtgagtgtttcactcattgcagagatttatgtgtcccactcgtatgtgtttaattcaattccagtaatgaattttgttccatgtctgcatggttcatttacattatccatgtggcaggttgttattgatgtgcgcaacatgtatgagatacgcataggaaaatttaagagagctgttgatccatgtacgaactcattcagagagttcccatcttgggttgatgatcagtttcaattggctgaatctgacagtcaactgtgctcagaaaataatgacaatacaattggcagacagtcggaagatgtgaattcaagcaaacccaaagagttaccacgagttgctatgtattgcactggtggcataagatgtgaaaaggcatcaagtttcctccttagcaagggctttaaagaggtaaatcatgaaggcttttctgtgttatattgttccgattaattccatatcaagatttttaggagtatcccattctttgaattcatcaaataaatagatgtgttatcatttactacattcttgaaaatcaatttcccctcagttgactcttgcattgagtgcagtttcttgtgatcaatgtcctcaccacaatagtatcatgttatggggctagatatatagtacaaaattttaggtttggatatcaaatcaacaatgaaaataatgaaaaattcttaaagcgagacactttgcccttgtgtgcactaattgtgcttcatcactagattctcccctagcttaggtcatagtgaaaatataggtaatgttaaaaaagattaccttaatatgtgatagatgtttaatgcatcaaatttttgctatcaacagttctctctctctctctctctctctctcccacacacacacactatggtttctgaaattgtccttgacatggttaattggtaatatatacttagtaggtttaataagctgctcatgtcaggtttatcacttggagggtgggatattgaagtacctagaggaaatccccaaggcagaaagcttgtgggagggtgaatgctttgtgtttgacaaacgtgtctcagtggagcacggattagcccaaggaacccacaaactttgttatggatgtaagaaaccagttagtgatgaagacatggaatctcctgagtgggagtatggtgtatcatgtccatattgctttgcaaccaaatccgaggaggagaaggaaagggcaagggcacggcagagacagtttgagacatggggagttattggcggccctgataaaggaagaagtccaaaaaggctggaagctaatcacacagctgaagagcccaaacagttgtcgagctcagtctaactcaaactgggtaactgaaacttgttccattaccacttctgattgattgacgttttgctgacgaagcgagggatccttttgtatcagccgcgtcttcttttgcacctttcttgtagtcttccagattatgtcttggtcccttatgtagccttacgataaagcttgaagttgtttttcggtagcaccgttgtttgttccatctggttctaattgtaaaaacagcagttactcttatgagttgcagcagtttcatgaataattatgcgctgagctaaagaggcaccgagatatcggtttggatgg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0323100, RefSeq:Os05g0323100