Os06g0173100
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os06g0173100 |
|---|---|
| Description |
Similar to 26S protease regulatory subunit 6A homolog (TAT-binding protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1) |
| Version |
NM_001063479.1 GI:115466689 GeneID:4340276 |
| Length |
4667 bp |
| Definition |
Oryza sativa Japonica Group Os06g0173100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 6:3688677..3693343 |
| Sequence Coding Region |
3688764..3688896,3689057..3689175,3689968..3690075,3690643..3690834,3691019..3691210 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008399:3688677..3693343 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008399:3688677..3693343 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgacgtcatccggcgctcccccgccggcggcgatggccgtggacgacgcggaggacgaccagctcgcctccatgtccacggaggacatcgtccgtgcctcccgcctactcgacaacgagatccgcgtcctcaaggatgagctgcagcggaccaacttggagctggaatcgttcaaggagaagattaaggagaaccaggagaagattaagctcaacaagcagcttccctacctcgtcggcaacatcgttgagattctggaaatgaaccctgaggatgaagctgaggaggatggtgctaatattgatttagactcacaaaggaaaggaaaatgtgttgttctgaagacttccacaagacaaactatattccttcctgtggttgggctagttgaccctgataaactcaagcctggtgatttggttggagtaaacaaagacagctaccttatactggacacactgccatcagagtatgattcacgagtaaaggcaatggaggtggatgaaaaacccacagaggactacaatgatattggaggtcttgaaaagcagattcaagagcttgtggaggcaattgttttgccaatgacacacaaagatcggttccaaaagttgggcattcgcccccccaaaggagttcttttgtatggaccacctggaactgggaagacattgatggctcgtgcatgtgctgcacagacaaatgcgacgttcctgaaattagctggtccacaattagtccagatgtttatcggtgatggagcaaagctggttcgggatgcttttcagcttgctaaggagaaagctccctgcatcattttcattgatgagattgatgccattgggactaagaggtttgacagtgaggttagtggtgacagagaagttcagaggactatgttggaattgctgaaccaactcgatggatttagtagtgacgagcggataaaggtcatagcggcaacgaatcgtgctgacattcttgatcctgctttgatgcgatctggtcgtttggaccgaaagattgagtttcctcatccatctgaagaagcaagagctagaatcttgcaaattcactcaagaaaaatgaatgtaaacccagatgtgaattttgaagagctggctcgctcaacagatgacttcaatggagcgcaactgaaagctgtttgtgtcgaagctggtatgcttgcactgcggcgagatgctacagaggtgactcatgaggacttcaacgaaggcataatacaggtgcaggctaagaagaagtctagcctaaattattacgcttaa</cdnaseq> |
| Protein Sequence |
<aaseq>MTSSGAPPPAAMAVDDAEDDQLASMSTEDIVRASRLLDNEIRVL KDELQRTNLELESFKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID LDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDS RVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKDRFQKLGIRPPKGVLLYGP PGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFID EIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMR SGRLDRKIEFPHPSEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVE AGMLALRRDATEVTHEDFNEGIIQVQAKKKSSLNYYA</aaseq> |
| Gene Sequence |
<dnaseqindica>88..220#381..499#1292..1399#1967..2158#2343..2534#2817..2935#3073..3160#3488..3607#3711..3851#4398..4475#actagctcagtcgctcgcctccgctgctggtgtcgagccgcttccgatccccccccctcccgacgcgaggccgaaaccctaccgccgatgacgtcatccggcgctcccccgccggcggcgatggccgtggacgacgcggaggacgaccagctcgcctccatgtccacggaggacatcgtccgtgcctcccgcctactcgacaacgagatccgcgtcctcaaggcaagcccgcctccgctctctctctctctcccctaaccctagatccccctccctccgaggtttttgccagttgcctcctccggtgaatctttgcttggattagggtttccgggtcgtctgatcggtttggggttttttttggtgtgattttggtgcgcaggatgagctgcagcggaccaacttggagctggaatcgttcaaggagaagattaaggagaaccaggagaagattaagctcaacaagcagcttccctacctcgtcggcaacatcgttgaggtaaaaaataacaaaaatgccatcctagtttatcagattggatcttctattgtgttgagatacttcttagtttgatatgagatcgtggagtagtgcgtgagagaaaagccaaatgcgtgtgctttagtgtgggggcaattcggtataaattgcttttggtctgattcatcctgtttcttgtcaacattgttctgtaattcaataatctgtcttagctcgctgtgttcagaagatccacaattccttgtaagaaaatattgatactgtgatcatttgattttgcttctgctatttccattatttgtgcctacacattatctatctaagtgttagcatgtatttgcagcagtaataactctctaaagtctaaattatgtgactttgatccataggactgtaacaaccaacaacttgatctggcttggattactaacatcaaatagcatttcaacttgattactggtctatgtcagtactcttagtgttcaagatcttcaaggtctgaataagttcatcctgagtagattaacgcaaatttgcataagcataacatctgatggttctgtagatactatcacctatgatgcatttgagtatctgcactcctacatgacttgcaatatggtacgattcatcatagataaagtatttaaaactaaaccacttctattgattcggcatgataattaagtgctattaccagaaattgctgtttccctattaatgtgacctattgttttggaacaattgcgtattgtaaccatatggtttctgcttttctcaactgtttagattctggaaatgaaccctgaggatgaagctgaggaggatggtgctaatattgatttagactcacaaaggaaaggaaaatgtgttgttctgaagacttccacaagacaagtaagaacaaaaacctggtttccctattcctttagctcctagattttacatcatatgaatggacgacttcctttattcatgaaatggaaaaaattgattaaattacagcatgcctcacatatcagttatttctatattggcaattaaaataaggtttctgttgtaactgaatggtttggattagatatgatccataaaatgaatataactgcaaagaagaatatgttgaagcaagtgtagttggttggaaattttgtaaaagtaaacagttctacagaacaatttatgcctgtcgtccagcaagcaaagtgctctcagttaatgtctttgctttggtacaatagtgtcggactttgttatgtgggattgtgagtcttttattgaaacatatgtttacttccaaatgtccgctggaatgtgtattactgttttaggttcatatctaaaagcaatgaaatattctgtaacataatattttttaggcttaagcatgacttatagttcaaaaaaaaaagagaaatcaaactcatttttgtaaaatatcctttgttcctatttcgattgcagactatattccttcctgtggttgggctagttgaccctgataaactcaagcctggtgatttggttggagtaaacaaagacagctaccttatactggacacactgccatcagagtatgattcacgagtaaaggcaatggaggtggatgaaaaacccacagaggactacaatgatattggaggtcttgaaaagcaggtacattgcttaataaatgttgaaagttcagtgttcctttttggaactggaaatattgacaaccatctctttagggaataatagagcaatttgtatcgcttcatgcatcaagcatgttacatttccatccatcttttccttttcataatttatcattctttccatcctattttattgaatatagattcaagagcttgtggaggcaattgttttgccaatgacacacaaagatcggttccaaaagttgggcattcgcccccccaaaggagttcttttgtatggaccacctggaactgggaagacattgatggctcgtgcatgtgctgcacagacaaatgcgacgttcctgaaattagctggtccacaattagtccaggtaattatttatttcaattaaaaagctccattgattatcatcttttttttttcttgtgaccatgttgatatttatttggtgttcatggggaggcaatagttatgtggttgatcatcattgtttgttggtattacacagatgtcaatttgattgtatggttctatgaatatcattcaagaatcacatatgaacagccttgccttcagaagtctatttatttactatttacttgcatatggttttctagcgcaacaataatcatatttttttgggcttgcccagatgtttatcggtgatggagcaaagctggttcgggatgcttttcagcttgctaaggagaaagctccctgcatcattttcattgatgagattgatgccattgggactaagaggtttgacaggtatgtatgtctcacatgatttttatcccctggaatttttcctacattgtttcaaattctataatataatcaaaacattcttattgaaaaaaatatattcttattgttaacaagcattttgctttattctatgacagtgaggttagtggtgacagagaagttcagaggactatgttggaattgctgaaccaactcgatggatttagtagtgacgagcggataaaggttaggatatattaatatttgtttctttgttgcatgccgacatgcatgtactgattatccctgccctgatggtttagttgagcacttgatcttttttgatttcttgatctaatctgaaaatggatggtgttacatttcatgttgaaaagacaaatccatgtttatgtttggttcatgaaccatccttgcgctgctacgattttatctagcttctgaaatttcatttatcaatatcatcttgatatcattgcttcgaatctctatgttttgattagcaatgttttctttttagtcatttcatctgtttgatggtatattattggtcaggtcatagcggcaacgaatcgtgctgacattcttgatcctgctttgatgcgatctggtcgtttggaccgaaagattgagtttcctcatccatctgaagaagcaagagctagaatcttgcaagtaggtttccagaacctgtgatgtctaatcagctaatgtttattcatccatttgcttttgtaatccacaagtcatgctttaactaatatgtggttctctgtagattcactcaagaaaaatgaatgtaaacccagatgtgaattttgaagagctggctcgctcaacagatgacttcaatggagcgcaactgaaagctgtttgtgtcgaagctggtatgcttgcactgcggcgagatgctacagaggtgtgacttcctattttattcttataatcccataacgttcctttgttcttataatcccgtaatgtccctaaggttttggtttcagttctttattgagggggaaaagattctttccagattcatttgtttctagttgacagaacttagtaaagaattaatgtgactgtttttagatggatattatgtgaatatttgcaaaactcgataaaaatctcagggttcacaagttaaatgccatgcacacaaatagcactgtatgtttttcccatggacatgttctcttgtggtatcactcagcataggattctgctctgacatggtgccgctttgcctgccaatttgtggtttctgctcataggaaatagttttgcaaagctttatttttgggggttctaggcaatccctctacaccattaagtttctttggcatttcattactggagattgtgttaatctgcttggcattgttagataagctatttgttaccaactctaattatgttgataactacttgtggtttcttatcctgatcgtttcttgcgcaggtgactcatgaggacttcaacgaaggcataatacaggtgcaggctaagaagaagtctagcctaaattattacgcttaacaagctatgctagaatcatcagggctctggagttgtttgtaaccatactgtttggataatcgaaaatatggcttcacgtttcatttgaggtataacttttttacactataaagtcatcacttgcttcttatgtgatggaaagttggaaactggaaagcttcttatgtgatggaaactggaaagtttttgttt</dnaseqindica> |
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