Os06g0174800
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os06g0174800 |
|---|---|
| Description |
RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein |
| Version |
NM_001063483.2 GI:297605269 GeneID:4340280 |
| Length |
4726 bp |
| Definition |
Oryza sativa Japonica Group Os06g0174800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 6:3780227..3784952 |
| Sequence Coding Region |
3780227..3781438,3781530..3781747,3782935..3783166,3783344..3784265,3784915..3784952 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008399:3780227..3784952 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008399:3780227..3784952 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgcattcctcctcttcctccccgtcgtcctccgttgagatcatcgacgccgacgccttccgctctcgctccaccgaccccgaccaccgccgcgcagacgccgccgccgccgactccccgttcccgaggtccgtcgccgaccacatcgcctcgtctctgcgcacgcaggaagcggtcgacgccgtctgcaagaagtacggtgtcctggcggagttcgccgcgcgccccgccggcgacctgcgcgcgtgctcggcgccgccgccgggcgccgcgtgcgtgtacgcgcgggcgctggaggccgggatgcgcctcccgctgcacccctttgcctgcgagcttctccgccatctcggcgtcgcgccgagccagatcacgcccaacgggtggcgcgtcgtggcggggttcctcctgctctcccaccacgccgccgcgccgccgtcgctcgccgtgttccggcgcttcttcaggctgttcttgtccaagctgaacggctggtaccacttccggggcaagcgcggcgccggcgccgacggggtgctcttcacggggttgcccaagctcaaagggtggaagggaggcttcttcttcgtgtcgtcgccgtcgccatggccgtgccaagtgcgatggggcgggccgccgccgtccaagagctctaccgccgagccggtgctcagcggcgaggagatggaattggcgggaaagcttctgcacttgcatggcggcgccgcggttgatctgaggacgtatctctgcgagagcaacctcgccgcggtgttctcctccaacctcgccggcgccgcaccaccgcagccgccgcctcctcgtcctgctcgtgctaaaggtaagtttcctttctccggcgagttcaacgcacagaaggtgaagaccgagccggagagcgacatgccgtggtggtcgccgttgtccgggaagaagagggggtttgaagcagaggagaataacccgccgccgtcgccgacgccgacgccgcctgctccgcatggcggctcgtggtcgtggtcggcttccggcatgtgttccccgccgccgggcttcgcggcgcacgtgcccgacaagcacgacggcgactcggccgactggaaggccgcgcggcagctgctccaggccatcgtcacgccgtcacgggagcgccggttcccggcggcgaagccctccgacgtcgtcgcgtcgagctacctgacactgcttcaggcggcgaactacgcgtcgttctcgttcggctacgcgctggagctggaggagaagctgcgtgcgcgggagcgcgacgccgccgcggaggcggacgccgtgcggaaggagctcgaggagaaggcgctgcgcgagctcgcggcggcgaaggcggcggcggtgcaggagtacctgcgctccgacgagcacaggcgggagctcgcggcgcacgcgctggagggtgctaagaaggaattgaaaaatgctttggtagagctggataacaagacatatgacagtggactttttgacagtgaatggaaaatcagatatgagatggaaaaggagatggaaaatatttacattcaggaggagatctggtggcagagaagagtggcagagaagaggaggggaaacttgattttacaaggagatgctaatacaacctttttctataagccctgcaaatggaagatggttagacccttctcttcaaatgaagtggacaaagtgatgaagactatgaaaaacaatacagcttctagccctgatgggttgcctgtgggtttttataaacaaatgtggcctcatataagggttttagttaaagagatgttagatgacttacacatgggtgagctggatatagatatgatcaattatggggtgatttctcctttgccaaaaatcagcgatgcaaacacaatcaaacagtatagacccatctatctacaaaatgtgacttttaggatgattgaagtggcaaacaaagtgattagttggtctcaaactgcctttatacctagaaggaatattttagaaggttgttttattttacatgaggtgatgtatgagttgaaaataaaaagggatactgggattatcctcaaaattgactttgagaaggcttatgacagggtaaaatgggattttttgtatgaggtcatggagaaaacgaattttgactccataatggtgggatggataaaaaatataactgaagatgggagagtgagtattaacattaatagtaaacagggacattttttcaaaacttacaggggtttgaggcaaggagaccacttgtctcctatccttttcaatcttgtgggtgatgccttggctgccattttggataaagccaaagaatggggagtccttgaaggtctggttccaaacttagtggatgggggtttgactcaccttcaatacgctgatgatacaatcctattcattaagaattctgatgagaacatccttgcccttaagttcttattattctgctatgaagagatgtcagggatgaagattaattatcagaaaagtgatgtatatgtcataggggtggaggatagtgagggattaagaattgctaatatgctgaattgtaagattggatatggtggtagaaggagaatggagcttggagtttag</cdnaseq> |
| Protein Sequence |
<aaseq>MHSSSSSPSSSVEIIDADAFRSRSTDPDHRRADAAAADSPFPRS VADHIASSLRTQEAVDAVCKKYGVLAEFAARPAGDLRACSAPPPGAACVYARALEAGM RLPLHPFACELLRHLGVAPSQITPNGWRVVAGFLLLSHHAAAPPSLAVFRRFFRLFLS KLNGWYHFRGKRGAGADGVLFTGLPKLKGWKGGFFFVSSPSPWPCQVRWGGPPPSKSS TAEPVLSGEEMELAGKLLHLHGGAAVDLRTYLCESNLAAVFSSNLAGAAPPQPPPPRP ARAKGKFPFSGEFNAQKVKTEPESDMPWWSPLSGKKRGFEAEENNPPPSPTPTPPAPH GGSWSWSASGMCSPPPGFAAHVPDKHDGDSADWKAARQLLQAIVTPSRERRFPAAKPS DVVASSYLTLLQAANYASFSFGYALELEEKLRARERDAAAEADAVRKELEEKALRELA AAKAAAVQEYLRSDEHRRELAAHALEGAKKELKNALVELDNKTYDSGLFDSEWKIRYE MEKEMENIYIQEEIWWQRRVAEKRRGNLILQGDANTTFFYKPCKWKMVRPFSSNEVDK VMKTMKNNTASSPDGLPVGFYKQMWPHIRVLVKEMLDDLHMGELDIDMINYGVISPLP KISDANTIKQYRPIYLQNVTFRMIEVANKVISWSQTAFIPRRNILEGCFILHEVMYEL KIKRDTGIILKIDFEKAYDRVKWDFLYEVMEKTNFDSIMVGWIKNITEDGRVSININS KQGHFFKTYRGLRQGDHLSPILFNLVGDALAAILDKAKEWGVLEGLVPNLVDGGLTHL QYADDTILFIKNSDENILALKFLLFCYEEMSGMKINYQKSDVYVIGVEDSEGLRIANM LNCKIGYGGRRRMELGV</aaseq> |
| Gene Sequence |
<dnaseqindica>1..1212#1304..1521#2709..2940#3118..4039#4689..4726#atgcattcctcctcttcctccccgtcgtcctccgttgagatcatcgacgccgacgccttccgctctcgctccaccgaccccgaccaccgccgcgcagacgccgccgccgccgactccccgttcccgaggtccgtcgccgaccacatcgcctcgtctctgcgcacgcaggaagcggtcgacgccgtctgcaagaagtacggtgtcctggcggagttcgccgcgcgccccgccggcgacctgcgcgcgtgctcggcgccgccgccgggcgccgcgtgcgtgtacgcgcgggcgctggaggccgggatgcgcctcccgctgcacccctttgcctgcgagcttctccgccatctcggcgtcgcgccgagccagatcacgcccaacgggtggcgcgtcgtggcggggttcctcctgctctcccaccacgccgccgcgccgccgtcgctcgccgtgttccggcgcttcttcaggctgttcttgtccaagctgaacggctggtaccacttccggggcaagcgcggcgccggcgccgacggggtgctcttcacggggttgcccaagctcaaagggtggaagggaggcttcttcttcgtgtcgtcgccgtcgccatggccgtgccaagtgcgatggggcgggccgccgccgtccaagagctctaccgccgagccggtgctcagcggcgaggagatggaattggcgggaaagcttctgcacttgcatggcggcgccgcggttgatctgaggacgtatctctgcgagagcaacctcgccgcggtgttctcctccaacctcgccggcgccgcaccaccgcagccgccgcctcctcgtcctgctcgtgctaaaggtaagtttcctttctccggcgagttcaacgcacagaaggtgaagaccgagccggagagcgacatgccgtggtggtcgccgttgtccgggaagaagagggggtttgaagcagaggagaataacccgccgccgtcgccgacgccgacgccgcctgctccgcatggcggctcgtggtcgtggtcggcttccggcatgtgttccccgccgccgggcttcgcggcgcacgtgcccgacaagcacgacggcgactcggccgactggaaggccgcgcggcagctgctccaggccatcgtcacgccgtcacgggagcgccggttcccggcggcgaagccctccgacgtcgtcgcgtcgagctacctgacactgcttcaggtacgcctccgccgcggccgccattgacgcgaaccgctcaagaatcgtcgcgtgcacttgccttcattcatgtcgtcgttgtttggcgcaggcggcgaactacgcgtcgttctcgttcggctacgcgctggagctggaggagaagctgcgtgcgcgggagcgcgacgccgccgcggaggcggacgccgtgcggaaggagctcgaggagaaggcgctgcgcgagctcgcggcggcgaaggcggcggcggtgcaggagtacctgcgctccgacgagcacaggcgggagctcgcggcgcacgcgctggaggggtacgagcgcggcatggagcgtcgcgctccggcgccacccgcccggatacaggtagtgttagataatatatctcatcctgtatcttatcccatattatttccttccaatcggattcgagaacggatatctatttgtatatctaattcatagatattaaatataataaagtaattgaagtattaaaagagatacatcaagaaaaaattatacaatattacatgtgagtatgtaaaatagttattaaccaatcttttatcatattttttatcatatttttaggtgaatcaataataatttttcatacatattttataatacggaacatatgggcggatacatgttttcccgtatcctaacccatatttatggcatgccacatcttaggtactaaaggtttggcaacctgaaaaagcatcaaaacaacccctactagttaaaatttgaagcacccaaccaaaatatattcgtgaatcattttaagcatagtactataaagtcttgttcaacatagttcattcatttcagcccatctcattcacaaaaagagtgaagaaaaattcgagcaaagcaaaaacatctcaaaaccacaaataacaagaaggaatcctgacacaaatcatctatcattctcaacatctcccacaatcataaacaaattaactaaattaaccaaacttgcctgatgttgaggcaatcaagaaagcggggattagataagacaacacacatggagtgacttctatcaaacattctcccgcgaacagtgctggtaaactcgagtagacgggcagcaccaacatccacagttcttaacctcggttgtttttttcttgtgatgcttctccaccttcgcacacagtttcttcgctgtcttgagcatagaacgaagcgaaacttgcgcacggacgaactcgctaccaaacccgccgcctcactacgagggatgaagagagagtaggggtaatgtatttagatttgaaatgggttggtttctacaacagattttaaagagcagatactatctaattggccttatagggtgcagatggggttttggattattctgctcacttgtttgaggagatggctgagggttatagagtgcagagcgggttttagattattggcatgttttgctcacttgtttgaggagatgactgaggggatggagtgctaatctaaacagtgctaagaaggaattgaaaaatgctttggtagagctggataacaagacatatgacagtggactttttgacagtgaatggaaaatcagatatgagatggaaaaggagatggaaaatatttacattcaggaggagatctggtggcagagaagagtggcagagaagaggaggggaaacttgattttacaaggagatgctaatacaacctttttctataagccctgcaaatggaaggtaaaggaaaagccatatcttctcttaaggggatgttaatatcacaaagctctcacaaattaaacaacacatgcatattataaggggttgcttggaaaagaagaaagcagggaagttcatctaagtcctgaaatctggcaagataagttgagactgactgagaaggaaaaagtttagatggttagacccttctcttcaaatgaagtggacaaagtgatgaagactatgaaaaacaatacagcttctagccctgatgggttgcctgtgggtttttataaacaaatgtggcctcatataagggttttagttaaagagatgttagatgacttacacatgggtgagctggatatagatatgatcaattatggggtgatttctcctttgccaaaaatcagcgatgcaaacacaatcaaacagtatagacccatctatctacaaaatgtgacttttaggatgattgaagtggcaaacaaagtgattagttggtctcaaactgcctttatacctagaaggaatattttagaaggttgttttattttacatgaggtgatgtatgagttgaaaataaaaagggatactgggattatcctcaaaattgactttgagaaggcttatgacagggtaaaatgggattttttgtatgaggtcatggagaaaacgaattttgactccataatggtgggatggataaaaaatataactgaagatgggagagtgagtattaacattaatagtaaacagggacattttttcaaaacttacaggggtttgaggcaaggagaccacttgtctcctatccttttcaatcttgtgggtgatgccttggctgccattttggataaagccaaagaatggggagtccttgaaggtctggttccaaacttagtggatgggggtttgactcaccttcaatacgctgatgatacaatcctattcattaagaattctgatgagaacatccttgcccttaagttcttattattctgctatgaagagatgtcagggatgaagattaattatcagaaaagtgatgtatatgtcataggggtggaggatagtgagggattaagaattgctaatatgctgaattgtaagattggtaagatgcctttcacatacttgggtttgcctatgggggttgacagaattgggatgagagacctatctccaatctttcagaaagttgagaagagacttcagtcttggaagagctgccacttgacttatggcggcagggggatcaagattaactcatatttgtctagtgcacccatgtatgctatggttttctaccttttgcttgaggggtttcacaaaaaaaaggacacaattagggggaacttttactggcagggggttggggaaaaaagaaatatcatatgataagatgggatgctccgtgcaagcccaaagagtttgggggaatgggttttttggatactagagcaatgaatctttgcttgctcagtaaatgggttatgaaattggaaagtggagcacctgatgtttgcttggaggtactgagaaggaaatatttgaggaattgtaatttttttcacaaggaatgggagtggtggctctcaattttggatgggtttgttgaaatgcaaagagtggctttctaggctggtcacaaaagaagtgcacagtgggagagatgtgagtttttggaaggatgtttggtgtgataatgtacctttgaaagttatctatttgaaattagtcatgatcaaaatgctactgtcaaggatatggtggtagaaggagaatggagcttggagtttag</dnaseqindica> |
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