Os06g0186600

From RiceWiki
Revision as of 20:19, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0186600

Description

Conserved hypothetical protein

Version

NM_001063546.1 GI:115466823 GeneID:4340346

Length

5384 bp

Definition

Oryza sativa Japonica Group Os06g0186600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:4370001..4375384

Sequence Coding Region

4370317..4370888,4371201..4371520,4372336..4372442,4372523..4372696,4373140..4373385

Expression

GEO Profiles:Os06g0186600

Genome Context

<gbrowseImage1> name=NC_008399:4370001..4375384 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:4370001..4375384 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtatcacaatgtacttgacgagcctagcccattgggtctgcggttaagaaaaagtccatctctcttggatttgattcagatgagactttctcaagcaaattcgactgcaggacagtcctctgcagatgattgcagttctgagcctccaaaaaagaaagaccttaaatcaggcacatcaacagctggggagcgcttgaaagcttcaaactttcctgcaaatattttgagaattggcacatgggagtatatatcacggtatgaaggtgatttggtggcaaaatgttacttcgcaaaacataagcttgtatgggaagttctggaaggtggtttgaagagtaagatagaaattcagtggtcggatattactgcattgaaggcatcttgccctgaaaatggacagggaaccttggatgtggtgttggcccgacctcctctcttcttcaaagagacggatcctcaaccaaggaaacacacactgtggcaagctacatctgatttcacaggtggccaagcaagtatgaacaggaggcattttctacagtgcccttcaagcttgttgagcaaaaactttgaaaagcttctccagtgtgatcagcggctaaaccaattgagtcagcaaccagacatcatattggactctcccgtttttgaacccagatgctctatatttgaggacccagttgaatcgaagtgccaaggttttactaatttgaaggacgaacatgaattatctgggttttcaggttctctgtcaccctgtgctggttcatccatgtctgctaagattgaagtcaatgattccattgcaacgcaagcaggatttcttgctcagccaggaaacccaggacctagtgcagtgaacgttcagggagtcagcagaaacgtaaatggtgctccagagttaaatatccccagctggtggagtcaactgaaagtgcctgggcttagaccgtctatgtcagtggatgatttggtaaaccacttgggaaactgcatctcggagcagatcacatcagtcaatcctacattgcccagcaacgaggtgccaacaaaagaaacactggaggagatcgctcagtaccttctcggagatgcacagggcccaccggcatcgacatccgacgagagatcgctgatggcgagggtggactccctctgctgtttgattcagaaagatacgccaccggtggcccagccaaagcctgaaccaaacgacagtgatagcattggaggcgatggcaccgaaggttccgatgaagaatttagctcggctgcatccacagtgaaaactacaggtcccgctcagccaccagccatgtcaaggaaggactccttcggagatctgctgatgaatcttccccgcatcgcctcgttgccccagttccttttcaagatacccgaggattctgagaattga</cdnaseq>

Protein Sequence

<aaseq>MYHNVLDEPSPLGLRLRKSPSLLDLIQMRLSQANSTAGQSSADD CSSEPPKKKDLKSGTSTAGERLKASNFPANILRIGTWEYISRYEGDLVAKCYFAKHKL VWEVLEGGLKSKIEIQWSDITALKASCPENGQGTLDVVLARPPLFFKETDPQPRKHTL WQATSDFTGGQASMNRRHFLQCPSSLLSKNFEKLLQCDQRLNQLSQQPDIILDSPVFE PRCSIFEDPVESKCQGFTNLKDEHELSGFSGSLSPCAGSSMSAKIEVNDSIATQAGFL AQPGNPGPSAVNVQGVSRNVNGAPELNIPSWWSQLKVPGLRPSMSVDDLVNHLGNCIS EQITSVNPTLPSNEVPTKETLEEIAQYLLGDAQGPPASTSDERSLMARVDSLCCLIQK DTPPVAQPKPEPNDSDSIGGDGTEGSDEEFSSAASTVKTTGPAQPPAMSRKDSFGDLL MNLPRIASLPQFLFKIPEDSEN</aaseq>

Gene Sequence

<dnaseqindica>4497..5068#3865..4184#2943..3049#2689..2862#2000..2245#gcttcccttcctctcgaatcacttcgattcgatttcgcttcgcttcgcctcgcgttcgccttctgcttcgatttcgacttcgattcggccggcggcggcggcggcggcgtcggtttggggggagttagggttagggttagggttagggtttccgggggtgatccctcccatggtgcagctgccgagctccgggaagcggccggccgagccggccatggcggcggcgtcggcggcgggggctacggtgaagctggaggcggacgagatgctgcatggcggcgaagaggacggcggcccgctcagcaagcgcgccaaggcgggggtccagatgcccgcgccgccgcctccgcctccgcccccgcagcagcaggtagatccgggggggggggggggggtttcgtgttctcgtattccgtttggtgggttttgatcgggggatgaggtggtagcgcgtcggattcgtaatgcttggcggcgagacggcgcgttttggtgctggattgtttgagggaggggaatcctttcttccctggcgtgtttttgacgcgtttgatccgaaaatactgtatatatgtggactcgagatggatggaatagaggggtataggtggatggaatagaatagtacagttttttttttggagtgatttgattgttcggatatggaatcgctagctgatgttgttagagagatcgcatgcacggtttgtgttgtaaatgtactgagaaatggttgttctgttcttagttgaatcaggtagggtcacagtctgcttgttggggttcaagtttatggatatgttttggatgtatctctatgataatatgctgtgcaggagcctggtattattgtgccattttgaggctgatggggcttcattgacgtccgatgatttgctgcagcggcacacttatttatatatttaactttgtgtattcatgtcacaagtcatgtgcatttgttcaatgtaatagggtaatgcctgtttatagtatgtcaaactgctaagttccgtactttgcgtgttatagaaaattttctaggaccaatcatcaatgctaacttccctttgcaagtagtgtacctatttggagcttggaataaaaatttttcgtcagaatccagtaagatgtgtgtgatataatcaataaccgatgcatagcacaccattttgagtgcttcctacttgggcagtaaaatgcgttgttagttcattttttcccaatcttaaataaaatctctagctggtattctttatgaaccatggaataggtgaaatatgccatatgactatcccatgcatgcattttctaacgcttgggagctagagcaatcctaatagttgaaatagcttataaatgtctgcccttttaacctattcaatgatttatgattctatattccatggaaaaagatccgtatcaggatttgctgattaggtgttgatatgtgacttggatatcaatgtttatttgtggaactgactgtgttctattcaagtagagcattggcatattatcaagctgatatgcaaattgcgttggtgtattaccaggccgacatgcaaagtgcatagacgagccatcatagagttcacgtgtagtttgcatgtagtactgtaatggttaacagagtcatcataaagttcatagacggttttggtcggaaagacgagaaaatgttaatggctacataaatgaaatggtcaaactagaatgctagatggtccaggatttgcctaggatgcatgcttgcttatcaatacacgaaagattgcttgcgttatttatgaaattccatatttgtcctcttcttgacttgttctatttgtgaaaatccaaatttgtcctcttcgccacttcgtgttatttgtgaaattccaaatttgtcctctttgtgactaattaatgttagttggtaatgtatacgtaaccaattatagtctaaaatggcagctttggtattcatattctttgctgacttgaacatttgcaggatatgtatcacaatgtacttgacgagcctagcccattgggtctgcggttaagaaaaagtccatctctcttggatttgattcagatgagactttctcaagcaaattcgactgcaggacagtcctctgcagatgattgcagttctgagcctccaaaaaagaaagaccttaaatcaggcacatcaacagctggggagcgcttgaaagcttcaaactttcctgcaaatattttgagaattggcacatgggaggtaagaatctagatatagcttttagtagttctgccacaaccttgacatttatttaattttggcgtcctccttttctgttgcttttttatttctttcaatcaaaattatttactatctacacagaaacattcttttgttgaggtacattcttagtttctgagtctcattgtggtgatgctgtttgcatgtaatacttccgatcttatgtaagcatagtacttactatagtttatattgtacaccactgtgagatgttaatgcaacattaaaacatcctatatcctgtcctaatggccaattatttgctacagtaggtagtcatttgcccaaaagccttattcctgcatgttgttgaatctacgacctagtgtttagtcacatttagagcagttctcctgaacaattgttggccataatcttaactgtattctatctctgagcagtatatatcacggtatgaaggtgatttggtggcaaaatgttacttcgcaaaacataagcttgtatgggaagttctggaaggtggtttgaagagtaagatagaaattcagtggtcggatattactgcattgaaggcatcttgccctgaaaatggacagggaaccttggatgtggtggtaagttattttaaagattattggttcatgttactttcctatcttgctttttttctgagaggtttctattattaatgaagttggcccgacctcctctcttcttcaaagagacggatcctcaaccaaggaaacacacactgtggcaagctacatctgatttcacaggtggccaagcaagtatgaacaggtaaggaaagcattaaatgtatgctagagcaaaatttgaatgcatttcttttgggtaggtgctagggtgtaatgggatcttagggtgagtttggcagggatgtttgcctgtagctattgttgtctcagagaatggggcgtatcagtagcgcatgattaattaagtattaactattataaatttgaaaaatggatttattgattctttaaaataactcctatatagaaaattgcatcttagaacccaacattacagtaacaggacagcaagtattgttatttttgtctctataagtagggtaatacagaacacgaactatgcttaccacttatcagtgtcttgtagtacattagtctatggttactgcatccttaatctggtttttaatttaagattacttttatggtgccttttctattagtagatttactgagggaactctgatttctttctggaggtaaaaaggtcataagaaatatttaaagctcacagctacgagaaagaaagtcaacataaactttaagatagctcttcagccttaagccagctatctacagaagaagtttcagcatcatctcctcgtaggagactactccctccgtcctaaaataaaccaaccccgtacgggatgtgacacatcctagtacgatgaatctggacacacatctggtatgagattggtttattttgggatggagggagtatgtttcttagcctaattccatttcagtttattacttgctgagcttccaatctcgatgtgccccccaccccaccccaccctcttatattcagtgtttccaaaaaaattgcaggaggcattttctacagtgcccttcaagcttgttgagcaaaaactttgaaaagcttctccagtgtgatcagcggctaaaccaattgagtcagcaaccagacatcatattggactctcccgtttttgaacccagatgctctatatttgaggacccagttgaatcgaagtgccaaggttttactaatttgaaggacgaacatgaattatctgggttttcaggttctctgtcaccctgtgctggttcatccatgtctgctaagattgaagtcaatgattccattgcaacgcaagcaggatttcttgctcagccaggaaacccaggtaaattgcccatgatgccatttccactgtccctcttcttgcacttcctgtctttgactagatatattgctggtagatgcatcgcaatttttctcagaattactacatttagttacttcaatagattctccaccacaatttttttggtcatctgagatgcgtcatatctgttcaattaaattacacatgtagttagactgatgtgctgacctagtacttctagttataatatgattataagttacaatgccttctacacaaaattctcttgtgttcaagattgaattttctaattctatagttatttaccaggacctagtgcagtgaacgttcagggagtcagcagaaacgtaaatggtgctccagagttaaatatccccagctggtggagtcaactgaaagtgcctgggcttagaccgtctatgtcagtggatgatttggtaaaccacttgggaaactgcatctcggagcagatcacatcagtcaatcctacattgcccagcaacgaggtgccaacaaaagaaacactggaggagatcgctcagtaccttctcggagatgcacagggcccaccggcatcgacatccgacgagagatcgctgatggcgagggtggactccctctgctgtttgattcagaaagatacgccaccggtggcccagccaaagcctgaaccaaacgacagtgatagcattggaggcgatggcaccgaaggttccgatgaagaatttagctcggctgcatccacagtgaaaactacaggtcccgctcagccaccagccatgtcaaggaaggactccttcggagatctgctgatgaatcttccccgcatcgcctcgttgccccagttccttttcaagatacccgaggattctgagaattgagtctggatatcccaggacttcgatcctcaattcctcattccctaaatgagggaagcttctgtaaaaagagatttgtacctgagcaataagccagcccgaccccccctctcttgtcttctgtggatgagatgagagagctgttcttagtcttcagtatccaccctgtaaatgtgtaatcgattaggttgcttcggatcgtgtcggtatctttcaggattgctatgggtcgtggataaagtgttcattggttctttttaactcgggcttgcccttgtgcaaaattagaattcaagtcaaattgtttacaactttcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0186600, RefSeq:Os06g0186600