Os06g0299300

From RiceWiki
Revision as of 20:21, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0299300

Description

Glucose/ribitol dehydrogenase family protein

Version

NM_001063982.1 GI:115467695 GeneID:4340818

Length

1840 bp

Definition

Oryza sativa Japonica Group Os06g0299300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:11200812..11202651

Sequence Coding Region

11200887..11201147,11201649..11201718,11201848..11202509

Expression

GEO Profiles:Os06g0299300

Genome Context

<gbrowseImage1> name=NC_008399:11200812..11202651 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:11200812..11202651 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctagtcatgtcttcatgatccggcaagagacggcgccggcgcagtggtggttcctctcgctggctttcgtcggcgccgcctacgccgccaccgtcacgctccgtttcgtcgcctacctcgcgctctgccggtgtcaccggccgaaggacgacctccgccgccggtacggcgaatgggccgtcgtcaccgggccaacgtccggcatcggccgtgccatggcgctggagctcgcgcgccacggcctcaacctcgtgctcgtcggccgtgacccagccatcctccgggagatctccggcacggtcaggtctctccacaaagtgaagaccaagaccgtggtgtttgacctgtccctcgtctggacccccgatggtgatgagccgctgcggcggctgcgggaggcggtggaggggctggacgtcggggtggtggtgaacaacgccggcgtggcgaagcccggcgccgtctacctgcacgaggcggacgtggaggcgtgggtgaggatggtgcgggtgaacatgtcggcagtgacggaggtgacggcggtggtgctacctgggatggtgtcgcggggtaggggcgccatcgtcaacatcggctcggctgggtcggagtacatcccgaccttacctctctacaccatgtacgccgccaccaaacggtacgtggctcagttctcccggagccttcacgtcgagtatgcaagtaaagggatccatgtgcagtgccaggcgccgttcttcgtggatacgaggctgatgttcaggttcgaggaggcggcgggcggcgtatcgctgttcacggtgacccctgacgcgtacgcgcgcgcggcggtggcgtggatcggccgcggcggcgcgctgtgcacgccggccgtccggcaccagctgctacggcgcatggccgccgccgcgccggactccgtccacgactggatcctcctgcgcttagccacctggaacagaaaacgttgtttcagcggatctgagtga</cdnaseq>

Protein Sequence

<aaseq>MASHVFMIRQETAPAQWWFLSLAFVGAAYAATVTLRFVAYLALC RCHRPKDDLRRRYGEWAVVTGPTSGIGRAMALELARHGLNLVLVGRDPAILREISGTV RSLHKVKTKTVVFDLSLVWTPDGDEPLRRLREAVEGLDVGVVVNNAGVAKPGAVYLHE ADVEAWVRMVRVNMSAVTEVTAVVLPGMVSRGRGAIVNIGSAGSEYIPTLPLYTMYAA TKRYVAQFSRSLHVEYASKGIHVQCQAPFFVDTRLMFRFEEAAGGVSLFTVTPDAYAR AAVAWIGRGGALCTPAVRHQLLRRMAAAAPDSVHDWILLRLATWNRKRCFSGSE</aaseq>

Gene Sequence

<dnaseqindica>1505..1765#934..1003#143..804#atagttttggcgactcggcgagtaaccgttccaaatcgctctcaaccgcgccatggccggctagactgcatgctaatgctacacatttatattgtacaaccccgccggtggggaggaagagagagcgagagagcgaatcatcatggctagtcatgtcttcatgatccggcaagagacggcgccggcgcagtggtggttcctctcgctggctttcgtcggcgccgcctacgccgccaccgtcacgctccgtttcgtcgcctacctcgcgctctgccggtgtcaccggccgaaggacgacctccgccgccggtacggcgaatgggccgtcgtcaccgggccaacgtccggcatcggccgtgccatggcgctggagctcgcgcgccacggcctcaacctcgtgctcgtcggccgtgacccagccatcctccgggagatctccggcacggtcaggtctctccacaaagtgaagaccaagaccgtggtgtttgacctgtccctcgtctggacccccgatggtgatgagccgctgcggcggctgcgggaggcggtggaggggctggacgtcggggtggtggtgaacaacgccggcgtggcgaagcccggcgccgtctacctgcacgaggcggacgtggaggcgtgggtgaggatggtgcgggtgaacatgtcggcagtgacggaggtgacggcggtggtgctacctgggatggtgtcgcggggtaggggcgccatcgtcaacatcggctcggctgggtcggagtacatcccgaccttacctctctacaccatgtacgccgccaccaaacggttcgtacacacgtaaagtgacatgtgtcataacttaaaaacaccatactttagatcagtggtattatactcttgtgtacatatgaatagaccatgagagtgaccggcctgttcatttcgatggagcaggtacgtggctcagttctcccggagccttcacgtcgagtatgcaagtaaagggatccatgtgcagtgccaggtaagttaatttatcagaaatctgtaaagaggccctgtttagatcttactttaaaattttttatcatgttacatcgaacgtttgaacacctacatgaaatattaaatataggctaaaaaataattaattataaagattgcgactaattcgcgagacgaatcttttaaatctaattgctacatgatttgacaatgtggtactacagtaaacatttgctaataacggattaattagacttaataattcatctcgcggtttactgacggattctgtaattagtttttattagtgcccgaataccttatgcgacaccctatataattaatatctgatgtgacatatcaaaactttacagccttagatctaattaaacaccccccatgcataatttgtaacttccatttgagtttactcattgacagattatgatgaaatctggaaagcataagggaatcaaatagctaggagtatgtatgatgctatgtatgtgcatgcgcgcaggcgccgttcttcgtggatacgaggctgatgttcaggttcgaggaggcggcgggcggcgtatcgctgttcacggtgacccctgacgcgtacgcgcgcgcggcggtggcgtggatcggccgcggcggcgcgctgtgcacgccggccgtccggcaccagctgctacggcgcatggccgccgccgcgccggactccgtccacgactggatcctcctgcgcttagccacctggaacagaaaacgttgtttcagcggatctgagtgacagatgacagattatgtgatgctaaagaattgccaacaaataaataatgtgtcttcgaaaagtgcaattgccgag</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0299300, RefSeq:Os06g0299300