Os05g0346300

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Revision as of 10:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0346300| Description = Similar to 40S ribosomal protein S7| Version = NM_001061796.1 GI:115463322 GeneID:4338485| Length = 3225 bp| Defini...")
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Gene Name

Os05g0346300

Description

Similar to 40S ribosomal protein S7

Version

NM_001061796.1 GI:115463322 GeneID:4338485

Length

3225 bp

Definition

Oryza sativa Japonica Group Os05g0346300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:16280723..16283947

Sequence Coding Region

16280941..16281063,16281620..16281802,16282675..16282798,16282898..16282971,16283052..16283126

Expression

GEO Profiles:Os05g0346300

Genome Context

<gbrowseImage1> name=NC_008398:16280723..16283947 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:16280723..16283947 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtatacagcaaggaggaagatccagaaggacaagggtctggagccaactgagtttgaggacactgttgctcaggcattttttgaccttgagaatgggaatcaggagctgaagagtgacttgaaggacctttacatcaatggagcagttcagatggatttacctggcaacaggaaggctgttattatttatgttccatacaggctgcggaaggcatataagaagatccatgtgaggcttgttagggaacttgagaagaaattcagtgggaaggatgtggttctggttgcaactagaagaatagtgaggcccccaaagaaaggctcagctgttgttcgccctcgtacccgcacacttactgctgttcatgatggcatcttggaggatgttgtgtatccagcagagattgttgggaagcgtgtcagataccacttggatggtagaaaaatcatgaagatcttcctggacccaaaggagcgcaacaacaccgagtacaagctcgacactttcagctctgtctacaggaggctctgtgggaaggacgtcgtgttcgactaccccatgaccgagactgcgtaa</cdnaseq>

Protein Sequence

<aaseq>MYTARRKIQKDKGLEPTEFEDTVAQAFFDLENGNQELKSDLKDL YINGAVQMDLPGNRKAVIIYVPYRLRKAYKKIHVRLVRELEKKFSGKDVVLVATRRIV RPPKKGSAVVRPRTRTLTAVHDGILEDVVYPAEIVGKRVRYHLDGRKIMKIFLDPKER NNTEYKLDTFSSVYRRLCGKDVVFDYPMTETA</aaseq>

Gene Sequence

<dnaseqindica>2885..3007#2146..2328#1150..1273#977..1050#822..896#ctcgaggtgaaggagcgcactgcgaagcgaacccttctccgccgcctccgctcttcgctgcacggtgctagctcgccgccgtccgtctcgcgcgcctcaaggtaaaaccaactctccttgttcgttagtctagcgagtgagtatgtatcagtattgccatctcgacttgttcgcacggaaatgaaatttgcatccgcgtctttggtgtgctgtgtggggggggatagatcatgggtgtatctgtgttgagatggtgtagtttgtttatttatttttcctcagggagcactagcgtgggtagattgtatcctgcactcatctctatggattgcctaggctatgcgagatttgtttgtttggctttggaatgttgtttcctttcaagagcttgccaaagtatgagttgagattgtggtgcgttttgtgaagtgcgtgttctagagttggtcaattgggacctcctcctaaggctggcacaatctgcctgcttctgtggagaaacgtcgtgaacatgtacgattttgttgctggtgttaaattagtagttttagatgggacgaattatctctttgttgctgcatgatggcatgcttcaaaaccaccaaccacttgtgctaggtgaaaacaaaagatgcgccttattttcacctgacattccgggaagcttgtcaaattggccttctctttaaattttcatggtgctatcacgcggctttcacttgtcttttttatggttttcttcgtccaatcggttaaagtcacaatttagtaccatttgcagtcagggattgattttgcgttcactacagggttatcacaagatgtatacagcaaggaggaagatccagaaggacaagggtctggagccaactgagtttgaggacactgttgctcaggttattttatttcctctgaattcattgattggcttatttagcatttgaaactctggatcttaactatctgtgggggacaggcattttttgaccttgagaatgggaatcaggagctgaagagtgacttgaaggacctttacatcaatggagcagtgtatgtgctttgccacaaatttatttgaaaaactgtgacttgtttgttctggttgccgtcaatggaccttttctctgaacttttttgttctggttgcagtcagatggatttacctggcaacaggaaggctgttattatttatgttccatacaggctgcggaaggcatataagaagatccatgtgaggcttgttagggaacttgagaagaaattcagtgggaaggtaaatttctaaatgcataatccatgatttgcagcacttattttgtagaattattttcacttctgacaaattatgcactgaccgtttctcttggatatgtaaagtctgaagtctgaacatttgccataacttattgatgcagtttcctggacaaatttcactaaaagtcaacaatagacaccttgctttaacctggtaaaaagagcatagtaaatacaaaaggaaaaagtctataccattctcgtggttgtctatacataggccctctttgtttaggcttaggcttattggcctagacttttaagtcagcttattggcttatatgatttataagccagtggatttaatgtcctacgtttagtggtggagtcatacatctatctcatataagccaaaaaagcttctccaacctagcttttggcttaatagtgttagagtggcttatggcttcaaaaaagccaaatgaaaaagctgcttgtttgttttggcttagactttttgacttataagttggcttataagcctaaacaaagagggcctaagtagtttgagaacttattctatccagtgtcggaattgagggatgataacctgaattccaacttttgtttgttatagggaaaccagcttaactgctcagtacaactttttattccagatgctaactgcaatttttttgtgctaataaagatgtccatcaagaatacccagctgtaattctgagtttctgccaattatattctgagctttagacttgttactatcttccttgaagttaatcattgtgcaatttactctagctttcttattatttctgctaacactcttgctggatgtcatgacaatattttttgattgctaatttgatataggatgtggttctggttgcaactagaagaatagtgaggcccccaaagaaaggctcagctgttgttcgccctcgtacccgcacacttactgctgttcatgatggcatcttggaggatgttgtgtatccagcagagattgttgggaagcgtgtcagataccacttggatggtagaaaaatcatgaaggtttgtgtttatatcatgaacatatagctatgagctgttggactctagtttttcttgagttggaatttgtgacagtttattgtttgcccctttttgtatgactgcatgttttctcttgaacatttctagtacctacgattttactgactctgtagaagagattcatcttcctttcaagtagtaggtataagaaacttcttttcctcaagaaatgcagagatgtgtttctcaaagcatgttccctttgcacctcaaattttagatgggagtgttttctatctattacggttaactgatttgcgctttttatgtttgaaatcgagatgttattattacaaatgccttactgatccaattgttcctatattgatgtggtcattttagtgtttgtttttgtgatttttaacactagccctcatgaaattctcaatatctgcacggtttattcatttattttaccttagctgtatttcaaacataatcacgggcgctaatgatttttatgctgtctcgctgaattcaaacaacgctgaccttgtatgaacttgtgctgcagatcttcctggacccaaaggagcgcaacaacaccgagtacaagctcgacactttcagctctgtctacaggaggctctgtgggaaggacgtcgtgttcgactaccccatgaccgagactgcgtaaaccatgtcatagttagtcgacggctatctttggccgcaaatgctgctactcttcctaaaatagactataactgtggtttcctatatgcgaaaagttttgacagtcctgtgatctgcatatctgattgctagaactggtttaaattgttcaggtgttttccaactgcagttgtagaacttgttgctttgttcaatggtagtattttcaacgtgcaaaat</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0346300, RefSeq:Os05g0346300