Os06g0343100
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os06g0343100 |
|---|---|
| Description |
Similar to ATP-dependent helicase DHX8 (RNA helicase HRH1) (DEAH-box protein 8) |
| Version |
NM_001064109.1 GI:115467949 GeneID:4340964 |
| Length |
3515 bp |
| Definition |
Oryza sativa Japonica Group Os06g0343100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 6:13791596..13795110 |
| Sequence Coding Region |
13791825..13795079 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008399:13791596..13795110 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008399:13791596..13795110 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggtggcggccaaggtgtcgacccctgccggcggcgcggtgcgcgacgggctccggcggctcacgcagctctcgctcgtctccaaggtctgctcggagctggaggcgcacctcggcgtcggcgaccgcgtcctcgcggagttcatcgtcgacctgggccgcgcatccccttccgtcgcagacttcgacgccaagctcaaggcccacggcgctgacctgccggactacctcgcgcgcaccctccacaccgtcatccacgccatccctacccacgccgacgacgcccccgcccccgccccccaaaaccctgcctcccgtggcaccggtgcaagggtttgcgggaaggacaaggcggaggagcgggtgagagatggggatccggggctgtaccaggtgtgccgcgggaaggtcaccggcctggcggacgccgggtgcttcgtccgcctcgacgacgcgcgcggccgcgaggggctcgtccatgtctccgagatgcccggccgccgaatcgccgtgaagcgtgggcaggaggtgttcgtcaagatcgtgtccgtgcaggggcgcaatctggggctgtcgatgcgggacgtcgaccaggacacggggaaggacctcctaccgttgcagcgtgctaggggggaggatgatgtgccgaggccgatggcgaatccgtggaccgatcgagccgccgccactaggagaaggacgggggtgtcaggaattgtgatccccgaggacaaccagactggcacggcatcgtcgcggcggccgattaggcggatgagctcgccggagaggtgggaaatgaagcagctgattgcttcaggggttctgaatgcgaaggattacccggcgttcgatgatgaggatagcgaggggatgaattaccaggaggaaggtgtggaggaggagcttgagattgagcttaatgaagatgagccagcattcttgcggggacagggtcggtccacaattgatgtgtccccagtgaggatttccacgaaccctgatgggtcgctgagtcgagcggcggttctgcagagtgcgcttatcaaggagtggcgtgatatcaggaacgaggatcaaagagcattggttgactccatcccaaaggatctgaatcggccatgggaggatcctgtgcctgaggtcggtgggcggtatctcgcacaagagctacgcggtgttggattatctgctgaaagcatgccagagtggaagaaagaggcttatgggaagactgtaacatttggtcagacttcaaggctttcaatcctggaacagaggcagagtcttccaatattcaggctgaagaatgagcttatcgaagctgttcgtgacaatcaagttctggttgttattggtgagaccggttcagggaaaacaacccaggttacacagtaccttgctgaggcaggctatattacgagggggaaaattgcatgtactcagcctcgcagggtcgctgcagagtcagttgccaagcgagtatcggaagagtttggttgccgattgggagaggaagttggttactcaatacgttttgatgatcacactggaccagatactgtcattaagtacatgacggatggcatgctccttcgtgaaattttgttggacactgacctctctagttactccgtggtcatgcttgatgaggcacatgagaggactatatatacagacattctctttgccttactcaagaagctaattaggcgtagaactgatctcaagttaatagtcacttccgccactcttgatgcagagaagttctctggatatttcttcgattgtaatatttttacaattcccggaagaacatatcctgtggagatactctattcaaaacagccagagagtgattacatgcatgctgcgctgctcacagtatcacagatccatctgactgaacctgaaggtgatatcctcttgttcttaactggccaggaagagattgatcatgcctgtcagtgtctctatgagaggatgaagtctctaggtaggaatgtaccagaattgctgatatatgcagtgtacagtgctcagccagctgaaatgcagtcaaagatctttgaacctactcctcctgggaagaggaaagtggtcgtggccactaacatagcggaagcatctattacaatagatgggatatattatgtaattgacccaggatttgcaaaactcaatgtgtataacccaaaacaagggctggattcactgatcatcacaccgatatctcaagcatcagctaaacagagggcagggcgtgctggacgtacaggcccaggaaagtgttatcgtctatacactgaaagtgcctatcgcaacgaaatgccccccacaactactccagaaattcagaggatcaacttgggggagacggtcctcaatatgaaggcaatgggaataaacgatctactgtcatttgacttcatggaccccccagctcctcaatcactcataactgcaatggaacaactgtacaaccttggtgccttagatgaggagggtctccttacaagagtagggagaaggatggcggagtttccacaagaaccaccactttcaaagatgctccttgctagtgtggacctcggatgcagtgatgaaatactgaccatcattgcgatgattcaaactgggaacatattctaccggccaagggaaaaacaagctcaagccgatcggaaaaggggcaactttttccaaccagaaggggatcacctcaccctgctcaccgtgtatcaggcgtggaaggcaaagcagttttcaggtccatggtgctatgagaattttgtccagctaacatccctgaggagagcacaggatgtcagaaaacagctccttgagattatggacaagtataagcttaacgttgtctctgcagggaatgatctcaccaaggtgaggaaagccatcactgctggcttcttcttccacgctgccaggaaggatccccagggaggatacaggaccattgctgatcatcagcaggtgtatatccaccctgccagcgctctcttccagcagcaaccagagtgggttatctatcatgaagtcgtcatgaccacaaaagagtacatgagggaggtgacagccattgacccaagatggcttgttgaactggcaccgaggttctacagatctgcagacccaacgaagatcagtaagcggaagcgccaagaaaggattgagcctctgtatgacagatacaacgagccaaactcatggcgcctcagcaagcgccgagggtaa</cdnaseq> |
| Protein Sequence |
<aaseq>MVAAKVSTPAGGAVRDGLRRLTQLSLVSKVCSELEAHLGVGDRV LAEFIVDLGRASPSVADFDAKLKAHGADLPDYLARTLHTVIHAIPTHADDAPAPAPQN PASRGTGARVCGKDKAEERVRDGDPGLYQVCRGKVTGLADAGCFVRLDDARGREGLVH VSEMPGRRIAVKRGQEVFVKIVSVQGRNLGLSMRDVDQDTGKDLLPLQRARGEDDVPR PMANPWTDRAAATRRRTGVSGIVIPEDNQTGTASSRRPIRRMSSPERWEMKQLIASGV LNAKDYPAFDDEDSEGMNYQEEGVEEELEIELNEDEPAFLRGQGRSTIDVSPVRISTN PDGSLSRAAVLQSALIKEWRDIRNEDQRALVDSIPKDLNRPWEDPVPEVGGRYLAQEL RGVGLSAESMPEWKKEAYGKTVTFGQTSRLSILEQRQSLPIFRLKNELIEAVRDNQVL VVIGETGSGKTTQVTQYLAEAGYITRGKIACTQPRRVAAESVAKRVSEEFGCRLGEEV GYSIRFDDHTGPDTVIKYMTDGMLLREILLDTDLSSYSVVMLDEAHERTIYTDILFAL LKKLIRRRTDLKLIVTSATLDAEKFSGYFFDCNIFTIPGRTYPVEILYSKQPESDYMH AALLTVSQIHLTEPEGDILLFLTGQEEIDHACQCLYERMKSLGRNVPELLIYAVYSAQ PAEMQSKIFEPTPPGKRKVVVATNIAEASITIDGIYYVIDPGFAKLNVYNPKQGLDSL IITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTTTPEIQRINLGETVLNM KAMGINDLLSFDFMDPPAPQSLITAMEQLYNLGALDEEGLLTRVGRRMAEFPQEPPLS KMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADRKRGNFFQPEGDHLTLLTV YQAWKAKQFSGPWCYENFVQLTSLRRAQDVRKQLLEIMDKYKLNVVSAGNDLTKVRKA ITAGFFFHAARKDPQGGYRTIADHQQVYIHPASALFQQQPEWVIYHEVVMTTKEYMRE VTAIDPRWLVELAPRFYRSADPTKISKRKRQERIEPLYDRYNEPNSWRLSKRRG</aaseq> |
| Gene Sequence |
<dnaseqindica>32..3286#attggccgttcgacacgcgaaaaccaacccaatggtggcggccaaggtgtcgacccctgccggcggcgcggtgcgcgacgggctccggcggctcacgcagctctcgctcgtctccaaggtctgctcggagctggaggcgcacctcggcgtcggcgaccgcgtcctcgcggagttcatcgtcgacctgggccgcgcatccccttccgtcgcagacttcgacgccaagctcaaggcccacggcgctgacctgccggactacctcgcgcgcaccctccacaccgtcatccacgccatccctacccacgccgacgacgcccccgcccccgccccccaaaaccctgcctcccgtggcaccggtgcaagggtttgcgggaaggacaaggcggaggagcgggtgagagatggggatccggggctgtaccaggtgtgccgcgggaaggtcaccggcctggcggacgccgggtgcttcgtccgcctcgacgacgcgcgcggccgcgaggggctcgtccatgtctccgagatgcccggccgccgaatcgccgtgaagcgtgggcaggaggtgttcgtcaagatcgtgtccgtgcaggggcgcaatctggggctgtcgatgcgggacgtcgaccaggacacggggaaggacctcctaccgttgcagcgtgctaggggggaggatgatgtgccgaggccgatggcgaatccgtggaccgatcgagccgccgccactaggagaaggacgggggtgtcaggaattgtgatccccgaggacaaccagactggcacggcatcgtcgcggcggccgattaggcggatgagctcgccggagaggtgggaaatgaagcagctgattgcttcaggggttctgaatgcgaaggattacccggcgttcgatgatgaggatagcgaggggatgaattaccaggaggaaggtgtggaggaggagcttgagattgagcttaatgaagatgagccagcattcttgcggggacagggtcggtccacaattgatgtgtccccagtgaggatttccacgaaccctgatgggtcgctgagtcgagcggcggttctgcagagtgcgcttatcaaggagtggcgtgatatcaggaacgaggatcaaagagcattggttgactccatcccaaaggatctgaatcggccatgggaggatcctgtgcctgaggtcggtgggcggtatctcgcacaagagctacgcggtgttggattatctgctgaaagcatgccagagtggaagaaagaggcttatgggaagactgtaacatttggtcagacttcaaggctttcaatcctggaacagaggcagagtcttccaatattcaggctgaagaatgagcttatcgaagctgttcgtgacaatcaagttctggttgttattggtgagaccggttcagggaaaacaacccaggttacacagtaccttgctgaggcaggctatattacgagggggaaaattgcatgtactcagcctcgcagggtcgctgcagagtcagttgccaagcgagtatcggaagagtttggttgccgattgggagaggaagttggttactcaatacgttttgatgatcacactggaccagatactgtcattaagtacatgacggatggcatgctccttcgtgaaattttgttggacactgacctctctagttactccgtggtcatgcttgatgaggcacatgagaggactatatatacagacattctctttgccttactcaagaagctaattaggcgtagaactgatctcaagttaatagtcacttccgccactcttgatgcagagaagttctctggatatttcttcgattgtaatatttttacaattcccggaagaacatatcctgtggagatactctattcaaaacagccagagagtgattacatgcatgctgcgctgctcacagtatcacagatccatctgactgaacctgaaggtgatatcctcttgttcttaactggccaggaagagattgatcatgcctgtcagtgtctctatgagaggatgaagtctctaggtaggaatgtaccagaattgctgatatatgcagtgtacagtgctcagccagctgaaatgcagtcaaagatctttgaacctactcctcctgggaagaggaaagtggtcgtggccactaacatagcggaagcatctattacaatagatgggatatattatgtaattgacccaggatttgcaaaactcaatgtgtataacccaaaacaagggctggattcactgatcatcacaccgatatctcaagcatcagctaaacagagggcagggcgtgctggacgtacaggcccaggaaagtgttatcgtctatacactgaaagtgcctatcgcaacgaaatgccccccacaactactccagaaattcagaggatcaacttgggggagacggtcctcaatatgaaggcaatgggaataaacgatctactgtcatttgacttcatggaccccccagctcctcaatcactcataactgcaatggaacaactgtacaaccttggtgccttagatgaggagggtctccttacaagagtagggagaaggatggcggagtttccacaagaaccaccactttcaaagatgctccttgctagtgtggacctcggatgcagtgatgaaatactgaccatcattgcgatgattcaaactgggaacatattctaccggccaagggaaaaacaagctcaagccgatcggaaaaggggcaactttttccaaccagaaggggatcacctcaccctgctcaccgtgtatcaggcgtggaaggcaaagcagttttcaggtccatggtgctatgagaattttgtccagctaacatccctgaggagagcacaggatgtcagaaaacagctccttgagattatggacaagtataagcttaacgttgtctctgcagggaatgatctcaccaaggtgaggaaagccatcactgctggcttcttcttccacgctgccaggaaggatccccagggaggatacaggaccattgctgatcatcagcaggtgtatatccaccctgccagcgctctcttccagcagcaaccagagtgggttatctatcatgaagtcgtcatgaccacaaaagagtacatgagggaggtgacagccattgacccaagatggcttgttgaactggcaccgaggttctacagatctgcagacccaacgaagatcagtaagcggaagcgccaagaaaggattgagcctctgtatgacagatacaacgagccaaactcatggcgcctcagcaagcgccgagggtaatttgtctgtatatagtttttacttccactatagctgctctttatgcaatgtaagctgagtacttgtatgtaagtgtaaatatactctgctgataagttccaatacatattgggatattaagcttgaccatcttgtttctcttttcatttaggaagcagatgctgaatgaggttgacaattttgactgtttctatattagttgatcctgaaacattactatctttcgctt</dnaseqindica> |
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