Os05g0348100

From RiceWiki
Revision as of 10:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0348100| Description = Conserved hypothetical protein| Version = NM_001187445.1 GI:297724020 GeneID:9269617| Length = 1685 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0348100

Description

Conserved hypothetical protein

Version

NM_001187445.1 GI:297724020 GeneID:9269617

Length

1685 bp

Definition

Oryza sativa Japonica Group Os05g0348100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:16399308..16400992

Sequence Coding Region

16400366..16400542,16400646..16400741,16400830..16400988

Expression

GEO Profiles:Os05g0348100

Genome Context

<gbrowseImage1> name=NC_008398:16399308..16400992 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:16399308..16400992 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacaccaccgcgtcatggcgcctcctccccccggccgcctcctcgccgccgcccaggaggcaggcggctcttctccggcgccacccggcggccaccaccacctcctcctcctccggcaagcggacgacgaggctcctctgcctcctccatgacacgcctcctcctgcaccgccgcccgccgctgacgagatcagctcgccgccgctgcggaagctggccgcggcgctgcagtgcggtgccatctgggcagcggttgaggccccggcggcgctggcggtgacgggcgaggaggacctcgacatcctggggatcctgccgacggtggccgccatcgccttcgtttacctgttcgtcttcccggtgagatccgggccgccattcttggtttcttgcgaggctaattcagagatcgggtgtacaggtttgtga</cdnaseq>

Protein Sequence

<aaseq>MDTTASWRLLPPAASSPPPRRQAALLRRHPAATTTSSSSGKRTT RLLCLLHDTPPPAPPPAADEISSPPLRKLAAALQCGAIWAAVEAPAALAVTGEEDLDI LGILPTVAAIAFVYLFVFPVRSGPPFLVSCEANSEIGCTGL</aaseq>

Gene Sequence

<dnaseqindica>451..627#252..347#5..163#ctccatggacaccaccgcgtcatggcgcctcctccccccggccgcctcctcgccgccgcccaggaggcaggcggctcttctccggcgccacccggcggccaccaccacctcctcctcctccggcaagcggacgacgaggctcctctgcctcctccatgacacggtaacatccatctctctcgaatctccccgatcgatcgatcagcgccattaatcacttgccgtgtttgttcttgccatccgttcggcagcctcctcctgcaccgccgcccgccgctgacgagatcagctcgccgccgctgcggaagctggccgcggcgctgcagtgcggtgccatctgggcagcggtaagttcgatcaagcagctaattctttgcatttcggatggatggatggatgaatgaccggcgctgcagcggattcgccgcgtgcgtccgccattgatcgcaggttgaggccccggcggcgctggcggtgacgggcgaggaggacctcgacatcctggggatcctgccgacggtggccgccatcgccttcgtttacctgttcgtcttcccggtgagatccgggccgccattcttggtttcttgcgaggctaattcagagatcgggtgtacaggtttgtgatggttttttttcctttgtttctgcagccgattatcatgaactggatgaggctgaggtggttcaagcgcaagttcgtcgagacgtacctgcagttcatgttcacctacctcttcttccccgggtgagttgcctcttgctaccacgtatgcttacaaagaacaaattaaagaacaaaatgcggcatcttcgaatcgtgaatatatagtattgtaattacctttcaatctgattttctgttgagcattaatgcagcaaagataatcatctagtgatctgctctatccctctggacaaaaatttaaatatatatacatattttgctgtcttaaggagatacccagagttactaaattttactgcggtgtagaattaatttttctgttataaaatttggcatctctccgtacattctaaggaccataaattttctaaaaaggactgcagtattgctttgccgaagatcatcatatcaatggaatcgatgcgcatgccgttgccaaattttgtttgtgtgaaccaaataaccgtgaaactcaaaattcccatcttcaacaacatatatctcttgctgtgaatggcctagtcatagtatcaattgaacccaattccttgtctgtgtgcatctctaccattttgcaggatgatgttgtgggcaccattcgtcaacttcaggaagttcccaagggatccaaccatgaagtacccttggtccaagccaaaggaaggcacaccgttgttcaaggacagatacccacctatagaaacctacaagtgatcagaagtactagaccgtattcttttcgaaaaaaaatagcatttctttgcatggatttgtaaaacatgcatggtgccacaatcttcttggatgtatcgagagcaaagtgagatctcacataaaagaaagggaaatgataatgatgcaatattacactagcccaggcaccgaagcatatgttgtgcttgggaaaaggttgctagataagttgcaggtgttggcaaaatctagtactggagtagcagcctgtctttctgtttcacagttaaggcaccgttttctc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0348100, RefSeq:Os05g0348100