Os09g0540400

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Revision as of 07:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0540400| Description = Similar to Family II lipase EXL3| Version = NM_001070343.1 GI:115480428 GeneID:4347725| Length = 1897 bp| Definitio...")
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Gene Name

Os09g0540400

Description

Similar to Family II lipase EXL3

Version

NM_001070343.1 GI:115480428 GeneID:4347725

Length

1897 bp

Definition

Oryza sativa Japonica Group Os09g0540400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:22102310..22104206

Sequence Coding Region

22102485..22102678,22102802..22103069,22103182..22103415,22103694..22103824,22103909..22104182

Expression

GEO Profiles:Os09g0540400

Genome Context

<gbrowseImage1> name=NC_008402:22102310..22104206 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:22102310..22104206 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcatgggagtgtcaagctgctgctgctggtggtgttctgtgtctcgccatggcaggtcgccgcgacgacgacggcgaatggtacgggcggcggcgggaggccgcgggtgccggccgtcctggtgttcggcgactccatcgtcgacaccggcaacaacaacgccgtgctgacgctcacccggtccaacttcaggccctacggcaaggacctcaacggcggcgaacccaccggccgcttctccaacggccgcatcccgccggacttcctagcgtcacggcttggcttgaaagacctggttccggcctacctcggcaccgacctcaccgacggcgacctcctcaccggcgtcagcttcgcctccgccggcagcggctacgacccgctcacctccactctcgtggcggttctgccgatgcaggagcagctgaacatgttcgccgagtacaaggagaagctcgctgggatcgccggcgaggccgccgccgcgaggatcgtgtcggagagcctgttcctcgtctgcgccggctccgacgacatcgccaacaactactacctcgcccccgtcaggccactccagttcgacatctcatcctacgtcgatttcctcgccaatctagcctctgatttcgtcaagcaacttcaccggcaaggggcgaggaggatcgccgtcctggggatgccgccgatcgggtgcgtgccgtcgcagcggcggagcgtcgccgtcgacgccgcgggcggcggaagggagtgcgacgcggcccaaaaccgcgcggcgcggctgttcaacgccaagctggagcaggagatcggctgccttcgcgagacgctgcagctgcagagcatcggctacgtcgacatctacggcgtcctggacgacatgatcgccgaccccggcaaatacggatttgatgtgtcgacgagaggatgctgcggcaccggagagttcgaggtgacgcttctctgcaaccagctgacggcgacgacgtgcgccgatgaccggaagtttgtcttctgggacagcttccatcctactgagagagcttacagcataatggtggattatctgtaccaaagatacgtggataagctactctaa</cdnaseq>

Protein Sequence

<aaseq>MEHGSVKLLLLVVFCVSPWQVAATTTANGTGGGGRPRVPAVLVF GDSIVDTGNNNAVLTLTRSNFRPYGKDLNGGEPTGRFSNGRIPPDFLASRLGLKDLVP AYLGTDLTDGDLLTGVSFASAGSGYDPLTSTLVAVLPMQEQLNMFAEYKEKLAGIAGE AAAARIVSESLFLVCAGSDDIANNYYLAPVRPLQFDISSYVDFLANLASDFVKQLHRQ GARRIAVLGMPPIGCVPSQRRSVAVDAAGGGRECDAAQNRAARLFNAKLEQEIGCLRE TLQLQSIGYVDIYGVLDDMIADPGKYGFDVSTRGCCGTGEFEVTLLCNQLTATTCADD RKFVFWDSFHPTERAYSIMVDYLYQRYVDKLL</aaseq>

Gene Sequence

<dnaseqindica>1529..1722#1138..1405#792..1025#383..513#25..298#actggctagctgccggtggtgaccatggagcatgggagtgtcaagctgctgctgctggtggtgttctgtgtctcgccatggcaggtcgccgcgacgacgacggcgaatggtacgggcggcggcgggaggccgcgggtgccggccgtcctggtgttcggcgactccatcgtcgacaccggcaacaacaacgccgtgctgacgctcacccggtccaacttcaggccctacggcaaggacctcaacggcggcgaacccaccggccgcttctccaacggccgcatcccgccggacttcctaggtcagcctatccgtctccatggtcgccggagtttcatctcgtcatttgagtcgtcgtccatggctgcatattgatcttgcgcagcgtcacggcttggcttgaaagacctggttccggcctacctcggcaccgacctcaccgacggcgacctcctcaccggcgtcagcttcgcctccgccggcagcggctacgacccgctcacctccactctcgtggtaatgtaacgtctcaaacacatctctccattgatcgccattggatttttttctcgaacgcgcaaaaaaattgtatgtcaatacaatatattagaagaaaagaataattgttacacaacacattaagtcagaccgactcatgccaagagaggaggggaacagaaaaccaaaggaaaaaaaaaagactcggatactacgactccaaacagcgggaatggggcgatcgccattggaatgcaagatgctgtgtagtttaatgctcgatggtttcgtttcaggcggttctgccgatgcaggagcagctgaacatgttcgccgagtacaaggagaagctcgctgggatcgccggcgaggccgccgccgcgaggatcgtgtcggagagcctgttcctcgtctgcgccggctccgacgacatcgccaacaactactacctcgcccccgtcaggccactccagttcgacatctcatcctacgtcgatttcctcgccaatctagcctctgatttcgtcaaggtgatggatcttgcaaccaaaaattctcacccaatctgaagcctcatctccaattcagaacctgttcatgttcagtttgttcgttcttgctgatgttggtagtggtacacagcaacttcaccggcaaggggcgaggaggatcgccgtcctggggatgccgccgatcgggtgcgtgccgtcgcagcggcggagcgtcgccgtcgacgccgcgggcggcggaagggagtgcgacgcggcccaaaaccgcgcggcgcggctgttcaacgccaagctggagcaggagatcggctgccttcgcgagacgctgcagctgcagagcatcggctacgtcgacatctacggcgtcctggacgacatgatcgccgaccccggcaaatacggtgacccagattcgatcgattcgttgttttgcttcaagaacacattgtcgaattcatcgattcgttagctctcgatcgatcgatcgcctgagaagatgctcgttgttgctgctgcctgtgcaggatttgatgtgtcgacgagaggatgctgcggcaccggagagttcgaggtgacgcttctctgcaaccagctgacggcgacgacgtgcgccgatgaccggaagtttgtcttctgggacagcttccatcctactgagagagcttacagcataatggtggattatctgtaccaaagatacgtggataagctactctaaggttttgctacttacactatttattactacttggttatcaaccgagaacacaatctcgtgctgtaaaaattaggagggtaattatgcaaccttagcacagttccagcacaatgtcacatggaaaactaccaagagatgtgagacccttttgttctgataatggaattatgaaagt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0540400, RefSeq:Os09g0540400