Os06g0484800
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os06g0484800 |
|---|---|
| Description |
RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein |
| Version |
NM_001064196.2 GI:297605831 GeneID:4341064 |
| Length |
3459 bp |
| Definition |
Oryza sativa Japonica Group Os06g0484800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 6:17392218..17395676 |
| Sequence Coding Region |
17392218..17392631,17392698..17392754,17393109..17393314,17393546..17395676 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008399:17392218..17395676 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008399:17392218..17395676 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgggctacaatggtcctgcttatacctggaccaacaagagaaagggcaatgaggtcatctttgaaagacttgataggtgtttggccaatgtggaatggtgtcaccacttccctaataccaatgtttatcatatccctctcatttatggtgatcatgctcctattcttgttttacttaaccctaatttcaggaaaccaaagagaagcttcaaatttgaaaattggtggctccttgaggaagacttcaacactgttgcaaaaaatagctggaacgattgtaatggttcttttgtcagcaaaaccaagttcttaagcaaaaatctctccacctggagcaaaaagaagaaacctattcaggatcaaatcgtaagcactgaagaagatattaaacaaattcaagcttcccaagataggcacaatctagtggataaagaaaaggagttaattgccaaatatgaccttctcttggagaaactctctgaatttcacagacaaagggccaagaaagactggattaaagatggggacagaaatacttccttctttcagcaagctgccatcaaaagaagaaggaaaaatagaattgcttccattgttagcaatgatgtttatattactaatcctgatgatattgctcaaatttttattaattatttctctgatttgttttgctctgatagaactgatagacctaatacttatcttcctaatactacttctcctcaagaaatggattggcagattccagatgaggaagaaatttggagtatcatcaagggcatgaggaaaaatgcttcccctgggccagatggtcttaatgctgctttttacagatctgcatggagttggataaaggatgatctaatgactctggttcaggacttctatcaaacaggtaacattcctcccgagctaaacaaaaccaatattgttctcattcctaaaaagaacagatctatttcccctaaagacttcaggcctatcagtctttgcaatgttccctacaagattctagccaaatctattgccaacagaattaagggtaagcttcctgatttcatttgtgattctcagcatgctttcattccaggtaggagaatagctaacaatattatcatagctcaagaaattgttcattcctttggtcttaattcttatcctcatcatgcttttcttatcaaaattgatctctctaaagcttttgatagacttgaatgggatttcattgccaatgctcttcaaaggaaaggctttcatcatcactttatcaatcttgtgctttcttgcattaattcttcttctttttctgttaatatcaatggtcagacttatggtgctttcaatgctaatcgtggtatcaggcaaggttgtcctctctctccttatcttttttgttttgccttaaatgagttatctgatcaattgaatgaagcccttcaaaatcataatatcaatggtatcaagcttagtgtctctggtgctgttattcactctttactctatgcagacgacctaatcattacaggtacagcaactgttgaggaggccaatcaaataaaaagcatcattgacaaattttgcaggaaatcaggacaaactcctaattgggataaatctgggatccttttcagtaagcatattccctctcatataaagaactatatcagtcaaatatttcctgttcctatcctggattctaatgtcagacatctaggtcaccctctttttgtcactaatagaaacaagtccatcatctataaattcatcattgataaattcagggccaagttgactactcttaaagcgaacaaactttcccatgctggcaggctaactcttatcaaatctgtgttttcttctctccctgtctactacatggctaccatcctcctttcaaaaaatctcctcaataaaatcactgctattatcaggaagttttggtggacaggtgttagagaaggacaggataaaaaccctttgtgcctgaaatcttggaaggagatctgtaggcctttggatgaaggtggtcttgaaattagagacattcaagctgtcaacaaaagtctaattcttaattctgcttggaggctcatcaccaatcctcatgaacaaatggctcaaattcttaaagatctctggactgagactaaagaatgggatagcaacaaacttaattccttatttgaagaagaagcggtgcacaaaatcatgcaggtaccaataatgcagaacgatgcagaggataagcttttctggaagcacacaagaaatggacaatgcaatactaagagtgcttacaaggaattttacaaaagagagaaccaaacaattcaacagctttggaaagccagaaatgatcttaaatttcagggtataatgaaagaaccttcccagggaaacactgaagaggaaggcactagcaaaagaagaatggaaagcatcccaaatggaaacagatgttatacagatgcagcctgggaaaatggagtaactggcatagggatattttttcattttccccaggatcataatgctatgtttatcaaagcaatctctgataaagctcagagtccattacaagctgaacttctggccctccaacttgctttagaaatctccaaatttctgaatcttgcagatgttatatacttgatggataacgctaccattgtggacgcagtaaagaggaacaacttcctgcaggaacccggacactggagccctaggccgttttggctgcagataacttcttccaccccagctgatctcatgcaagttagatggatcccaaattcccaagggagatga</cdnaseq> |
| Protein Sequence |
<aaseq>MGYNGPAYTWTNKRKGNEVIFERLDRCLANVEWCHHFPNTNVYH IPLIYGDHAPILVLLNPNFRKPKRSFKFENWWLLEEDFNTVAKNSWNDCNGSFVSKTK FLSKNLSTWSKKKKPIQDQIVSTEEDIKQIQASQDRHNLVDKEKELIAKYDLLLEKLS EFHRQRAKKDWIKDGDRNTSFFQQAAIKRRRKNRIASIVSNDVYITNPDDIAQIFINY FSDLFCSDRTDRPNTYLPNTTSPQEMDWQIPDEEEIWSIIKGMRKNASPGPDGLNAAF YRSAWSWIKDDLMTLVQDFYQTGNIPPELNKTNIVLIPKKNRSISPKDFRPISLCNVP YKILAKSIANRIKGKLPDFICDSQHAFIPGRRIANNIIIAQEIVHSFGLNSYPHHAFL IKIDLSKAFDRLEWDFIANALQRKGFHHHFINLVLSCINSSSFSVNINGQTYGAFNAN RGIRQGCPLSPYLFCFALNELSDQLNEALQNHNINGIKLSVSGAVIHSLLYADDLIIT GTATVEEANQIKSIIDKFCRKSGQTPNWDKSGILFSKHIPSHIKNYISQIFPVPILDS NVRHLGHPLFVTNRNKSIIYKFIIDKFRAKLTTLKANKLSHAGRLTLIKSVFSSLPVY YMATILLSKNLLNKITAIIRKFWWTGVREGQDKNPLCLKSWKEICRPLDEGGLEIRDI QAVNKSLILNSAWRLITNPHEQMAQILKDLWTETKEWDSNKLNSLFEEEAVHKIMQVP IMQNDAEDKLFWKHTRNGQCNTKSAYKEFYKRENQTIQQLWKARNDLKFQGIMKEPSQ GNTEEEGTSKRRMESIPNGNRCYTDAAWENGVTGIGIFFHFPQDHNAMFIKAISDKAQ SPLQAELLALQLALEISKFLNLADVIYLMDNATIVDAVKRNNFLQEPGHWSPRPFWLQ ITSSTPADLMQVRWIPNSQGR</aaseq> |
| Gene Sequence |
<dnaseqindica>3046..3459#2923..2979#2363..2568#1..2131#atgggctacaatggtcctgcttatacctggaccaacaagagaaagggcaatgaggtcatctttgaaagacttgataggtgtttggccaatgtggaatggtgtcaccacttccctaataccaatgtttatcatatccctctcatttatggtgatcatgctcctattcttgttttacttaaccctaatttcaggaaaccaaagagaagcttcaaatttgaaaattggtggctccttgaggaagacttcaacactgttgcaaaaaatagctggaacgattgtaatggttcttttgtcagcaaaaccaagttcttaagcaaaaatctctccacctggagcaaaaagaagaaacctattcaggatcaaatcgtaagcactgaagaagatattaaacaaattcaagcttcccaagataggcacaatctagtggataaagaaaaggagttaattgccaaatatgaccttctcttggagaaactctctgaatttcacagacaaagggccaagaaagactggattaaagatggggacagaaatacttccttctttcagcaagctgccatcaaaagaagaaggaaaaatagaattgcttccattgttagcaatgatgtttatattactaatcctgatgatattgctcaaatttttattaattatttctctgatttgttttgctctgatagaactgatagacctaatacttatcttcctaatactacttctcctcaagaaatggattggcagattccagatgaggaagaaatttggagtatcatcaagggcatgaggaaaaatgcttcccctgggccagatggtcttaatgctgctttttacagatctgcatggagttggataaaggatgatctaatgactctggttcaggacttctatcaaacaggtaacattcctcccgagctaaacaaaaccaatattgttctcattcctaaaaagaacagatctatttcccctaaagacttcaggcctatcagtctttgcaatgttccctacaagattctagccaaatctattgccaacagaattaagggtaagcttcctgatttcatttgtgattctcagcatgctttcattccaggtaggagaatagctaacaatattatcatagctcaagaaattgttcattcctttggtcttaattcttatcctcatcatgcttttcttatcaaaattgatctctctaaagcttttgatagacttgaatgggatttcattgccaatgctcttcaaaggaaaggctttcatcatcactttatcaatcttgtgctttcttgcattaattcttcttctttttctgttaatatcaatggtcagacttatggtgctttcaatgctaatcgtggtatcaggcaaggttgtcctctctctccttatcttttttgttttgccttaaatgagttatctgatcaattgaatgaagcccttcaaaatcataatatcaatggtatcaagcttagtgtctctggtgctgttattcactctttactctatgcagacgacctaatcattacaggtacagcaactgttgaggaggccaatcaaataaaaagcatcattgacaaattttgcaggaaatcaggacaaactcctaattgggataaatctgggatccttttcagtaagcatattccctctcatataaagaactatatcagtcaaatatttcctgttcctatcctggattctaatgtcagacatctaggtcaccctctttttgtcactaatagaaacaagtccatcatctataaattcatcattgataaattcagggccaagttgactactcttaaagcgaacaaactttcccatgctggcaggctaactcttatcaaatctgtgttttcttctctccctgtctactacatggctaccatcctcctttcaaaaaatctcctcaataaaatcactgctattatcaggaagttttggtggacaggtgttagagaaggacaggataaaaaccctttgtgcctgaaatcttggaaggagatctgtaggcctttggatgaaggtggtcttgaaattagagacattcaagctgtcaacaaaagtctaattcttaattctgcttggaggctcatcaccaatcctcatgaacaaatggctcaaattcttaaaggtaagtattttccaaattcttctttttgggaagcttcaaagaacatttctaaatcggtctactggagttctgtactcaaaataaggaaggtgctgaaacactctgtctcctggcagttaggagaaggcaacatttctatttagaatcaaccttggtgtgatcttaacaatgacatttatcattttattaaatctaatcctttgcccagtcagttgcctgttaaagttgcagatctctggactgagactaaagaatgggatagcaacaaacttaattccttatttgaagaagaagcggtgcacaaaatcatgcaggtaccaataatgcagaacgatgcagaggataagcttttctggaagcacacaagaaatggacaatgcaatactaagagtgcttacaaggaattttacaaaagagagaaccaaacaattcaacaggtagattctcaatccattgcactaatcaaatctgtttggaaaactagaaatatgcctccaaaagttaaggtttttgcttggagattggttaggggtgctcttccttcggctctcagacttcaccaaagagtaaatgacatctctgttgcctgttgtagatgtggtatgcctgaaagtgattttcatcttttcttctcttgtcctttcagtagaataacatggatgatttcgtgttgcagatttaatattgataacttctctgataattctctcttatctctgatcatatcctgcatcacttctaatgctgctaacaattctgatcttaacaaatttttcaatgttatgtggcagctttggaaagccagaaatgatcttaaatttcagggtataatgaaagaaccttcccaggtctgttacctggctgatgcaatgattagttcctattcttgtgttctttctcaatctgtgctgcagggaaacactgaagaggaaggcactagcaaaagaagaatggaaagcatcccaaatggaaacagatgttatacagatgcagcctgggaaaatggagtaactggcatagggatattttttcattttccccaggatcataatgctatgtttatcaaagcaatctctgataaagctcagagtccattacaagctgaacttctggccctccaacttgctttagaaatctccaaatttctgaatcttgcagatgttatatacttgatggataacgctaccattgtggacgcagtaaagaggaacaacttcctgcaggaacccggacactggagccctaggccgttttggctgcagataacttcttccaccccagctgatctcatgcaagttagatggatcccaaattcccaagggagatga</dnaseqindica> |
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