Os06g0485100

From RiceWiki
Revision as of 20:23, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0485100

Description

Conserved hypothetical protein

Version

NM_001064197.1 GI:115468125 GeneID:4341065

Length

5239 bp

Definition

Oryza sativa Japonica Group Os06g0485100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:17415110..17420348

Sequence Coding Region

17415606..17415986,17416552..17416671,17417076..17417219,17417640..17417699

Expression

GEO Profiles:Os06g0485100

Genome Context

<gbrowseImage1> name=NC_008399:17415110..17420348 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:17415110..17420348 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgcaggtatgatgttgctgccttcctgtctcatcggttgttcgaatctggtgatccagaagtacgagttcgcttttctggatttggagccgaggaagatgaatggataaatgtccgtaaatgtgtgcggcaacgttctcttccgtgtgaatcaactgaatgtgttgctgttcttcctggagacctcatactttgctttcaggaaggcaaagagcaggctctgtatttcgatgcttgtgtccttgatgctcaaaggcgtagacatgatgtacgagggtgtcgctgtagatttcttgttcgctacgatcatgatcactctgaggaaattgttccactgaggaaggtatgtcgccgaccagaaactgactacaggcttcagattctgcatgctgctagagcagcaggtatggctaaagaggctgtggttgatttggtgtcgcacaatgataagagctcagcggagcagaaacccccaaagcagcacaaaatgatggatgtgaacactgatgaggtaaccatggtttctaaccaagaccaagaagagccaacaggcaagcctgctgctaccttgccagcagcaccggtcaaaaccctgaatgattcagcttcagcttcagcttcagatgtccaaatgggcgaggcacaggctgctccaaaagttgaatcttctgatgaagtagaagacaagatgaaagagggatag</cdnaseq>

Protein Sequence

<aaseq>MCRYDVAAFLSHRLFESGDPEVRVRFSGFGAEEDEWINVRKCVR QRSLPCESTECVAVLPGDLILCFQEGKEQALYFDACVLDAQRRRHDVRGCRCRFLVRY DHDHSEEIVPLRKVCRRPETDYRLQILHAARAAGMAKEAVVDLVSHNDKSSAEQKPPK QHKMMDVNTDEVTMVSNQDQEEPTGKPAATLPAAPVKTLNDSASASASDVQMGEAQAA PKVESSDEVEDKMKEG</aaseq>

Gene Sequence

<dnaseqindica>4363..4743#3678..3797#3130..3273#2650..2709#gcctgcctgcctgcctgcctgaacgaggaatcgctcatcgctgcatcactggtaacgtctatctctcctctcgctcgctcgcttcctctccgattcccccatggaatcatggatccatccaactaatcccctcccctcgcagccgcagacgccggcgtggtcgggatggggcggccgccgagcacggggggcccggcgttccggttcacccaggcggaggtggccgagatggaggcccgcctgcagcagctcaacaacgccatcccgcaccgctccgtcatccaggccctcgccgacaagttcacctcctcccccgcccgctccggcaaggtcgccgtccagcccaagcaggttaccattagggttttcctcccccctcctccttcctcttccccctccctggcggggaattcgccgcctcatctcgatccggccgcactcgcaggtgtggaactggttccagaaccggaggtactcgcaccgctccaggagctccaggggccccccgacgctgatgcagaccaagatgctgcccacggggtccgacgagcacaagtcgcctcccttcagggctatgccctctgcctctgcgcactccggctcgccctcaggtcatttgctcatgttactcttgctattaggagtaggtagtggtatatctccggtttcaacaattttataatggcaccgttccgactagacgaatagtaatggtatttttcaaaacaggcaaatttataatgtcatggatccaattaaccctataagtaatgagatacttcggccatatgtcagatccgtgtattggttctatgttagtaaccttccatctatgcatcatgatcattgtttatcattcctttttatcctctgattgttgatctttggtgttcaaaatcagggaagggttctttggagagcggccaggttgaatttgaagcaaagtcggctagagatggcgcatggtatccatgttacttctatgtcttttgtcttttgatttccatgtacgagtaggttcatggcgttttgcttgctgtttgacacatagttatcagacttggaccaaactagtggtctgactggaataaactgaacctaaagttctggcttgatcagcccgtctaattggattgtttcccatattggcctgcaaatcatagctgaactgaccagttttcctacagcctggtggggttaactatgacacagcccatttattcagtaaaattcaaaaatagcatggacaacagtaaacctccagatgcacctgtgttattggttaacattgtaagtgagaaatataagttctattaaccttgcctgcacagatcacaaattgatagctttcttattataaaatagagcatgtggtttgactgatggccgaatgatccatctgtgactgagtgattcacaggtcatatcttgcaatttagtatttcactgttttggatggttttctttgttctgtattctttataatatgctctatactgagtttaagtttaacgattgcttcttaatcaccattctaacttctaagcagcatacttgtttgttatataggtttgtatctcagttttgctgactttattatgaagagaattgcttgctatagaattgtcagatactgttaaattaggtttcagttttctttattgatctgtgttttttttttatgtttgtgttcatatctacaaagttgaatacaagaccccatttggatgccagaactgaggctagaaaaggggaattagaattggatctctcaattccgtcgttggttgctcttctgatttggagttgtaggccatttccgactgaatcggtggacaactaaattggtcctccaccaattcagagcactatgattggagctttcactggatctttcactggtgaccattcaccaatttcttgtgccactatcactgtttcacggtctattttctagacctacagctgccatcccttctttcaccactccagtggccatttccttcttccttaactctagcagtcatccttcatctttctcaactctggttgtcagcgtccctgacaaaatctgctgttaagctgtctacttccctagtagccgctgtggccattgattgctctggtcagcacaccagtgatgctccagccaccacttcggcaactacccaagaaggaacatcaggcctcctggtttgtttgtttgcttccaatgtgccaattcatttgcgtattgcatccaaccttaaactggatatttattgagaggtcatttctatttgagatgcctttggcaaccaatcacaatgaaaataattgagatgacaattcgaattcaatttggatttgaattgaagatccaactaaattcattcaacccaatgtagaggggaactggttacgcaagatctcttttaacatctgattaagtatatcagcattcttatggtctgtcattcatataagttcacttctatggtagtggtagccatcctaaacaaatgtatatttgtgctcaacgaatattgtgcctgatcattaactacaaatgcaaatgaatcaacgagttcagatactttctacactatgttcttgaaaaattgtaatctctgtgtttttacatttttttttgtgtataactaagcttttatgtgcaggtatgatgttgctgccttcctgtctcatcggttgttcgaatctggtgatccagtaaggatcatagtttttttattagatataatttatgttgctaaatgcatgtctggctttctttattgaaagcactttgctagctttgaacctgtagctgattcgatttatatcatttatcttaatgcggttgcatactcaatcctttttctttaattattttttaaaaacaagtttctactgcattattggtgttctagtatgactttcagaacattctgtattttttaaaaaaatctggcttatatctaaaattggcactacagttgaataatttttttccaacatatgccaatatgacatgcctgcgttgttgtgccggtatttttataaaactgtgtatacacaatgacatttattcctagttacaacatgtggtataaataatttgtctcacatgagcaattcttaatattttaggaagtacgagttcgcttttctggatttggagccgaggaagatgaatggataaatgtccgtaaatgtgtgcggcaacgttctcttccgtgtgaatcaactgaatgtgttgctgttcttcctggagacctcatactttgctttcaggtcttgccatcttagacatcttttcttgacctatgtactgtatctacatgtcacagattcagaattgatgtgtagttgaattcaaaattttaattttaagttagaagattgatttctgtttgttctgttctaaaaaaatgtatcacagattttccttaaaacatggccaaaaaaagtcatgcatatttgatacttgatgcacaaaacaccaaggggtgtaaaactgtaaaccagtaattgaacacacatttaggttcctgctttttaaataaagaaatctaaacataaatatatgttcttcgatgattatcttgatgaaatgctatttataattatgattaggtatcacatttactcaaattgttgtctaacatgaacaaatacatctgtcctaaattgaccaggaaggcaaagagcaggctctgtatttcgatgcttgtgtccttgatgctcaaaggcgtagacatgatgtacgagggtgtcgctgtagatttcttgttcgctacgatcatgatcactctgaggtattttactcactgcattcacccgttgaatgttgtgtgactattgtagtaatgcatgctctaagaatctaatttattctcttacattatggctttaatgatatacttcataagtaaagcgtcgttgtttaagttcctgaacttgcatacgcaattccatcaacgctttactgtgcaagtttaacgaccttatgcatatgatattagcttgtgcacgttatacccgtgagtaccatatgttgtagcatcatcctataggttcctgtagaagtttaagcaatttttatttatgctctagatgtggaattttaaggacaccatgcaaatttatattcatcatctctgaaaatttaagtatgcatgcatagattttccaagttcatatgatattagcccatgcatcctgctgtcttgcgcctttcttattttttattgccgaactacctaaaataatgtattttaccgggcttttgctagttatttcactttgttgaataaaactaaaaccttattgtgttttactctgattcgtttacaatcattaaaattccatttaaaatgacaggaaattgttccactgaggaaggtatgtcgccgaccagaaactgactacaggcttcagattctgcatgctgctagagcagcaggtatggctaaagaggctgtggttgatttggtgtcgcacaatgataagagctcagcggagcagaaacccccaaagcagcacaaaatgatggatgtgaacactgatgaggtaaccatggtttctaaccaagaccaagaagagccaacaggcaagcctgctgctaccttgccagcagcaccggtcaaaaccctgaatgattcagcttcagcttcagcttcagatgtccaaatgggcgaggcacaggctgctccaaaagttgaatcttctgatgaagtagaagacaagatgaaagagggatagttggttgcctttgctgagcattatgtttggctggcggctgcagtaaacagcatctggttaaatgcattggcatctgatcacctgttctcctgctaggctgctacacacatgttgtgacttccaacgcaggaatgtatgtcttcagtcttcacaacacatgttgtgacttgtgaagatttagtaattgcttaggaaccctctcaaaagggtaaatatgattgttaggaactttagctccaaacataaattgattgcataggaactttagctccgaagaaaatgtaatgtggttgcggtgggattgacttgattgctgtcacacaaattcggccgaggatccgtgttgaccacaaataggactggcctgccatgccacaactaggatctgtgtttaatatagcgtgccaaataggtgtgaatcggtgcctttgaaggttatcatcaattgttctgaaggtaaaatttctcaggagaaagtctaatatacattcttgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0485100, RefSeq:Os06g0485100