Os06g0498800

From RiceWiki
Revision as of 20:23, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0498800

Description

Similar to MOTHER of FT and TF1 protein

Version

NM_001064236.1 GI:115468203 GeneID:4341107

Length

2519 bp

Definition

Oryza sativa Japonica Group Os06g0498800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:18416965..18419483

Sequence Coding Region

18417129..18417361,18418697..18418737,18418978..18419039,18419198..18419392

Expression

GEO Profiles:Os06g0498800

Genome Context

<gbrowseImage1> name=NC_008399:18416965..18419483 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:18416965..18419483 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcatcgcatgtggacccgctggtggtggggagggtgatcggcgacgtggtggacctgttcgtgccgacgacggccatgtcggtgcggttcgggaccaaggacctcaccaacggctgcgagatcaagccgtccgtcgccgccgcgccgcccgccgtgcagatcgccggcagggtcaacgagctcttcgctctggtcatgactgatccagatgctcctagccccagcgagccgactatgagagagtggcttcactggctggtggttaacataccaggtggaacagatccttctcaaggggatgtggtggtgccgtacatggggccacggccgccggtggggatccaccgctacgtgatggtgctgttccagcagaaggcgcgcgtggcggcgccgccgcccgacgaggacgccgcgcgcgccaggttcagcacgcgcgccttcgccgaccgccacgacctcggcctccccgtcgccgccctctacttcaacgcccagaaggagcccgccaaccgccgccgccgctactag</cdnaseq>

Protein Sequence

<aaseq>MASHVDPLVVGRVIGDVVDLFVPTTAMSVRFGTKDLTNGCEIKP SVAAAPPAVQIAGRVNELFALVMTDPDAPSPSEPTMREWLHWLVVNIPGGTDPSQGDV VVPYMGPRPPVGIHRYVMVLFQQKARVAAPPPDEDAARARFSTRAFADRHDLGLPVAA LYFNAQKEPANRRRRY</aaseq>

Gene Sequence

<dnaseqindica>2123..2355#747..787#445..506#92..286#atccaagctagctatagctagtatatatctgacaaattcagagaaattcagagagtcaccgcgagagcttaagctagctagctagccggccatggcatcgcatgtggacccgctggtggtggggagggtgatcggcgacgtggtggacctgttcgtgccgacgacggccatgtcggtgcggttcgggaccaaggacctcaccaacggctgcgagatcaagccgtccgtcgccgccgcgccgcccgccgtgcagatcgccggcagggtcaacgagctcttcgctctggtcagcacacacacacacgcacatgtgcagcagaattatacttgtgttaattactagtcccttttgacataagcatgcttaattactgccttgatctgactatttgatcgacacatgtcgtgttttgttgcgacctgtgtgtgttcgtgcgtggttaggtcatgactgatccagatgctcctagccccagcgagccgactatgagagagtggcttcactggtaattaattattattactgttactgtttttcttttagtcttttaataataaatatggtatatacctatatatatatatctccggcgtgtggcaacatgcacacggctaatttactgttactgttatgcatgaactcgccatgaatttaaatggtgattatttcgcattgtgtctttttccttttgaagttaccgttgcggttttcttttttttttaactgttctattgttttggaccaggctggtggttaacataccaggtggaacagatccttctcaaggtaaataatcatgcaagcatgctagtaccttataatttcctaaacaagcttaagtgatatatatagtacagtattacttcctaattgacactctttcttccatgcatcttcacttttactatatatagtcaaatatatcatgtattagagtgtgtttagttcacgctaaaactgaaagtttggttgaaattggaacgatgtgatggaaaagttgtaagtttatgtgtataggaaagttttgatgtgatggaaaagttgaaagtttgaagaaaaagtttggaactggccgtgtttagttcacccccaactaccccaaacttccaatttttcatcacatcacattacatccaaaactttcctacacacataaacttttaactttttttccgaactttcaactttctccaaacttccaatattttttaggaactaaacacagcctaaacaaggccttaattccccacaatgcaattaaccgagttgcatgcactgattttgccctgtgcaaggaaggtcgctagcaagcgctagtagtagcagtaagcaagtagcaaccgaccggctagattcggcgtagctatgcagagcctgtgtccatttcagccagctatagctgcaggctgcgcacagtaggtgccagccggcgagcggccacctgtcggccgccacgagcaacatgtggcggggctgcgggccccgccggtggtacacgtgtaagcccacctccgcactccgcgccgccacgtgtcgcacgccggacgacgacgtcggccgccaccgtcgtcatcgtcatccggccggtcgtctcacatcgctagctggatttaattagtttaattcgttggattaattaaacagggaggaggctaatctagtctagctacacggttgttttggctctcatcgaccctgatccaacgacaaaaaagacgtcgcctagctttttttgagttcgtcctggtagggtgggtggtgtgacctgctggcgtgatctttttcatctggcgactcttggaagcttttggccaaggacacgtagtcgcttatccatgatgattaattcacactgtacatttggtatcttcgtagtcaagagtaagattgctagctagctaattcaacccaagatcacccgtcaagagttatagtggagttggttcgcacgcgcacggttgatcttgtaacagcgaccgtcgtcttatcgttgattaaagctgcatcataatttgatttgataattaacacatgaattatattactccgtaggcaagcagcagccagaagctgtttaattactgattttgatgtgttcgtttaatttgtggatcgatgcaggggatgtggtggtgccgtacatggggccacggccgccggtggggatccaccgctacgtgatggtgctgttccagcagaaggcgcgcgtggcggcgccgccgcccgacgaggacgccgcgcgcgccaggttcagcacgcgcgccttcgccgaccgccacgacctcggcctccccgtcgccgccctctacttcaacgcccagaaggagcccgccaaccgccgccgccgctactagcctccctcccctcgctcggcgtcgcccatccatccatccatggacggcgacggcgacctagctagctaataagccatcggtcggccatgctcgccgtccaaactatcatgcaccatatcatgtcgtcgtttatgtggttaattaattatttccggcgttttatt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0498800, RefSeq:Os06g0498800