Os05g0353500

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Revision as of 10:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0353500| Description = Protein kinase-like domain containing protein| Version = NM_001061818.2 GI:297604352 GeneID:4338509| Length = 2692 b...")
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Gene Name

Os05g0353500

Description

Protein kinase-like domain containing protein

Version

NM_001061818.2 GI:297604352 GeneID:4338509

Length

2692 bp

Definition

Oryza sativa Japonica Group Os05g0353500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:16680093..16682784

Sequence Coding Region

16680093..16680670,16680769..16680901,16681278..16681976,16682026..16682147,16682679..16682784

Expression

GEO Profiles:Os05g0353500

Genome Context

<gbrowseImage1> name=NC_008398:16680093..16682784 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:16680093..16682784 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaggatgagcagggtggcggtggctgtgctgctgctgctctgcttgcagcttcagcttgggatcagcggcggcggcggcggcggccatggtgctcggcgagatggacagctgaacaaccaaccattcgaccccatccgggctgcacgcatgttcttgtccaattgctcgtcaactttagcctcatctctgctcaatcattcgcaggttgatccatgccaagaagccggcagcaaggccggatggccgtcgacgtcgtcgacgccgtcgaacccgttcggactcccgatgctgctgccgccgccgccgccgctcaaggactggccgccatggctcgacatgccgccggtccagggcccgtcgagctcgccctcgccttcgccttcccctgcgccttcgccagcgtcgtcggccgcggtcgccgagcacgcggccccgccgcggcgcggcgaggaacacgcgcgcccccgcagcatcgcgttgccgccggcgtctagctccggcgacgccggcgaaaccagccggccggaggtgacggacgggagcgcaacgaggcgcggcggcggcggcggcaagacgaactacgttcttgtggcggcggcgggggcgtcggtgcttcttgcggcgtcggcggcggcgttcgcggcgtgctaccggtcgagcaaggtggtgaggagcgtgcggccgtgggcgacggggctgagcgggcagctgcagagggcgttcgtgacgggggtgccggcgttgaggagggcggagctggaggcggcgtgcgaggacttcagcaacgtcatcggctcgctgccggagtacaccatgtacaaggggacgctctccagcggcgtcgagatcgccgtcgtctccaccaccaagacgtcgcccaaggactggtccaagaagtgcgaggcacacttcagaaagaagataacgagcctgtcgagggtgaaccacaagaactttgtgaaccttcttggctactgcgaggaggagcagccgttcacgaggatgatggtgttcgagtacgccccaaacggcacactattcgagcatctccacgcgagggacgaggggcacctggactggccgacgcggctgcgcgtggcggtcggcgtcgcctactgcctggagcacatgcaccagctcgccccgccggagatcgtccggacgctggacgcctccaccgtctacctcaccgacgacttcgccgccaagatctccgacgtgggcttctgcgaggaggagatggcggcggcggcggcggcgccggcgatggcggacagggagagcgtggtgcacgggtacgggatgctgctgctggagatgatggcggggcggctcgcggcgtcggagggcgggctggtgcaggggtgggcggcggcgctcctccgcggggagcggcggctgcgggacgtcatggacccggcgctgcggggcgccttccacgccgagaccgtcgaccgcctggacgccgtcgtccggtcctgcgccgaccgcgacccgaggcggcgcccctccatggccgacgtcgcggcccggctcagggagatcaccgccatgccgcccgacgccgccacccccaaggtgtcgccgctctggtgggccgagctcgagatcatctccaccgaggcagcctga</cdnaseq>

Protein Sequence

<aaseq>MERMSRVAVAVLLLLCLQLQLGISGGGGGGHGARRDGQLNNQPF DPIRAARMFLSNCSSTLASSLLNHSQVDPCQEAGSKAGWPSTSSTPSNPFGLPMLLPP PPPLKDWPPWLDMPPVQGPSSSPSPSPSPAPSPASSAAVAEHAAPPRRGEEHARPRSI ALPPASSSGDAGETSRPEVTDGSATRRGGGGGKTNYVLVAAAGASVLLAASAAAFAAC YRSSKVVRSVRPWATGLSGQLQRAFVTGVPALRRAELEAACEDFSNVIGSLPEYTMYK GTLSSGVEIAVVSTTKTSPKDWSKKCEAHFRKKITSLSRVNHKNFVNLLGYCEEEQPF TRMMVFEYAPNGTLFEHLHARDEGHLDWPTRLRVAVGVAYCLEHMHQLAPPEIVRTLD ASTVYLTDDFAAKISDVGFCEEEMAAAAAAPAMADRESVVHGYGMLLLEMMAGRLAAS EGGLVQGWAAALLRGERRLRDVMDPALRGAFHAETVDRLDAVVRSCADRDPRRRPSMA DVAARLREITAMPPDAATPKVSPLWWAELEIISTEAA</aaseq>

Gene Sequence

<dnaseqindica>2115..2692#1884..2016#809..1507#638..759#1..106#atggagaggatgagcagggtggcggtggctgtgctgctgctgctctgcttgcagcttcagcttgggatcagcggcggcggcggcggcggccatggtgctcggcgaggtgtgtgttgtatgtttgtttttgtttgttcagatgatcagcttgtccaagaatgttctggtttctgtttagctgatttgtgtatgttttgaaatcattgttatgatgtggtgttgatggaacggcgaattggaatgaaggcgtgcgccctgcagctcggtgagaacgattgatgttttcttggctcactttcatgttcgtacatgccctgaatttcagtctaaattttgacaaaattcagagactcttaattataggcagtagtaataaagtttattttcaaaaaaccgcaataatagagtttcctttaaggaaataataattcacagtgttataattaggttgcagcttgggcataatttcttcttctcttccatcacaagtttcccctgcatttgaacaagcataggccaaatttgcctgaattatccgtgaatgttcatcacaaagacatttttccatagaaatcaaagtagatatagaatggtaggaaaaaaatttgtgctaggaatgttgtcgtggctgtcagagatggacagctgaacaaccaaccattcgaccccatccgggctgcacgcatgttcttgtccaattgctcgtcaactttagcctcatctctgctcaatcattcgcaggttgatccatgccaagaagtcatcatcatcttcgcagcagcagcagcagcagcagcggagcaggcaggccggcagcaaggccggatggccgtcgacgtcgtcgacgccgtcgaacccgttcggactcccgatgctgctgccgccgccgccgccgctcaaggactggccgccatggctcgacatgccgccggtccagggcccgtcgagctcgccctcgccttcgccttcccctgcgccttcgccagcgtcgtcggccgcggtcgccgagcacgcggccccgccgcggcgcggcgaggaacacgcgcgcccccgcagcatcgcgttgccgccggcgtctagctccggcgacgccggcgaaaccagccggccggaggtgacggacgggagcgcaacgaggcgcggcggcggcggcggcaagacgaactacgttcttgtggcggcggcgggggcgtcggtgcttcttgcggcgtcggcggcggcgttcgcggcgtgctaccggtcgagcaaggtggtgaggagcgtgcggccgtgggcgacggggctgagcgggcagctgcagagggcgttcgtgacgggggtgccggcgttgaggagggcggagctggaggcggcgtgcgaggacttcagcaacgtcatcggctcgctgccggagtacaccatgtacaaggggacgctctccagcggcgtcgagatcgccgtcgtctccaccaccaagacgtcgcccaaggactggtccaagaagtgcgaggcacacttcagaaagaaggtattactactgcctccctttgtaaatattactattattattgtttattttattgtgaattggtttatcattaaatgtaatttaaatatttgcaaagaaaagctaaataaggacaatggtcaatgacgttatgtattaaaaaccagagtaaataattgtcaattagagtacatgcacaaatcatatctagaatctttagtgtgtgtaagatacgttcccttgatattattttaattttgactaccaataatgcaatacttgattatttttttccctaggtccctatgaaattgaactgattcactgattcctgtgaaaaagtttacgagataacggtgcctaacattgtgtcatttgtgttggggggttgttccagataacgagcctgtcgagggtgaaccacaagaactttgtgaaccttcttggctactgcgaggaggagcagccgttcacgaggatgatggtgttcgagtacgccccaaacggcacactattcgagcatctccacggtaattttctttggaactttggatttctacctacttcgacaccccgacctgtagcaagcacgaaaaatggcagctgacattgacggtgggaaatgcagcgagggacgaggggcacctggactggccgacgcggctgcgcgtggcggtcggcgtcgcctactgcctggagcacatgcaccagctcgccccgccggagatcgtccggacgctggacgcctccaccgtctacctcaccgacgacttcgccgccaagatctccgacgtgggcttctgcgaggaggagatggcggcggcggcggcggcgccggcgatggcggacagggagagcgtggtgcacgggtacgggatgctgctgctggagatgatggcggggcggctcgcggcgtcggagggcgggctggtgcaggggtgggcggcggcgctcctccgcggggagcggcggctgcgggacgtcatggacccggcgctgcggggcgccttccacgccgagaccgtcgaccgcctggacgccgtcgtccggtcctgcgccgaccgcgacccgaggcggcgcccctccatggccgacgtcgcggcccggctcagggagatcaccgccatgccgcccgacgccgccacccccaaggtgtcgccgctctggtgggccgagctcgagatcatctccaccgaggcagcctga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0353500, RefSeq:Os05g0353500