Os06g0560000

From RiceWiki
Revision as of 20:24, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0560000

Description

Ferroportin1 family protein

Version

NM_001064402.1 GI:115468535 GeneID:4341302

Length

2312 bp

Definition

Oryza sativa Japonica Group Os06g0560000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:22274009..22276320

Sequence Coding Region

22274235..22274701,22274770..22275613,22275817..22275944,22276055..22276070

Expression

GEO Profiles:Os06g0560000

Genome Context

<gbrowseImage1> name=NC_008399:22274009..22276320 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:22274009..22276320 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagtgatggccacctcgcggcgccgctcctcgacggcggcggcggggtggacgacgcggcgcttctccggcggctctacgtggggcacttcctggcgaggtggggcgcgaggatgtgggagttctcggtggggctctacatgatccgaatctggccgggctcgctgttgctcacggcggtgtacggcgtcgtggaggcctccgccgtggcggcgctgggccccatcgtcggcgccgtcgtcgacaggctcgcatacctgcaggtgctcaggctgtggctgctgctgcagggcgcgtctttcgtcgccgccggcgtctccgtcacggcgctgctcgtctacggcgcccggctcgccgccgcggggttcccggcgttcgtggcgctcgtcgtcgtcaccaacgtctccggcgcgctcgccgcgctctccaccctcgctggcaccatactgatcgagagagaatgggtggtggtgatcgccggcgggcaaccggcggcggtgctgacggggatcaactcggtgatccggcggatcgacctgagctgcaagctgctggcgccggtgctgtccgggttcttcatcagcttcgtgtccatggaggcctccgcggcggcgctggcggcgtggaacctcgccgccgtgtgggtccagtactggctcttcgtctccgtctacgccggcttcccggcgctcagcgagaccagccagatctcaagacggcgcgccgacgatgacgaggcagcggcggcggcgcagccgcagaaggtggagcggctgtggatgacgatgctgccgtgctgggagtcgtgggcggtgtacgcgcggcaggaggtggtgctccccggcgtggcgctcgcgttcctctacttcaccgtgctgagcttcgggacgctgatgacggcgacgctggactgggaggggatcccggcatacgtgatcagcctcgcccgcggcgtcagcgccgccgtcggcatcgccgcgacgtgggtgtacccggcggcgcacgcccgcgtgtccacgctccgcgcgggcctctggtccatctgggcgcagtggtgctgcctcctcgtctgcgtcgcctccgtctgggccggcggcgccgcgccattggcgtcggcgtggatgctgatgggcggcgtggcggcgtcgcggctggggctgtggatgttcgacctagccgtgatgcagctgatgcaggacggcgtcccggagagcgaccggtgcgtcgtcggcggcgtgcagaactcgctgcagtccatgttcgacctgctcacctacgtcatgggcatcatcgtctccgaccccagggatttcggcgagctgatcgtgctgtccttctttctcgtgacctgcgcggcggcaatgtacacgatgcatgtgtaccgggtgaggaagcatctgttccatctcgacaggatcctgcccaagatgaactggatcaaagcttcttga</cdnaseq>

Protein Sequence

<aaseq>MASDGHLAAPLLDGGGGVDDAALLRRLYVGHFLARWGARMWEFS VGLYMIRIWPGSLLLTAVYGVVEASAVAALGPIVGAVVDRLAYLQVLRLWLLLQGASF VAAGVSVTALLVYGARLAAAGFPAFVALVVVTNVSGALAALSTLAGTILIEREWVVVI AGGQPAAVLTGINSVIRRIDLSCKLLAPVLSGFFISFVSMEASAAALAAWNLAAVWVQ YWLFVSVYAGFPALSETSQISRRRADDDEAAAAAQPQKVERLWMTMLPCWESWAVYAR QEVVLPGVALAFLYFTVLSFGTLMTATLDWEGIPAYVISLARGVSAAVGIAATWVYPA AHARVSTLRAGLWSIWAQWCCLLVCVASVWAGGAAPLASAWMLMGGVAASRLGLWMFD LAVMQLMQDGVPESDRCVVGGVQNSLQSMFDLLTYVMGIIVSDPRDFGELIVLSFFLV TCAAAMYTMHVYRVRKHLFHLDRILPKMNWIKAS</aaseq>

Gene Sequence

<dnaseqindica>227..693#762..1605#1809..1936#2047..2062#gactgctcagatgcagacgtgttcttgtctcacccttcacctgcatgatcctctctttttcaatccctcgatccactcatctctcctggctaagaatcaatctcttcttcacatcaatatcggagtgatcgatcagtctcgtcgcggttcgatcgattggcctctgatccgtacatcttcttgtgtgatcgatcaagaatcattcaagattgcaaggtgagtaagtatggcgagtgatggccacctcgcggcgccgctcctcgacggcggcggcggggtggacgacgcggcgcttctccggcggctctacgtggggcacttcctggcgaggtggggcgcgaggatgtgggagttctcggtggggctctacatgatccgaatctggccgggctcgctgttgctcacggcggtgtacggcgtcgtggaggcctccgccgtggcggcgctgggccccatcgtcggcgccgtcgtcgacaggctcgcatacctgcaggtgctcaggctgtggctgctgctgcagggcgcgtctttcgtcgccgccggcgtctccgtcacggcgctgctcgtctacggcgcccggctcgccgccgcggggttcccggcgttcgtggcgctcgtcgtcgtcaccaacgtctccggcgcgctcgccgcgctctccaccctcgctggcaccatactgatcgagagagaatggtagtgttcggtgttcgcatctatcgattgatagatcgagaaaattgctgagaatttgctgcgtgcagggtggtggtgatcgccggcgggcaaccggcggcggtgctgacggggatcaactcggtgatccggcggatcgacctgagctgcaagctgctggcgccggtgctgtccgggttcttcatcagcttcgtgtccatggaggcctccgcggcggcgctggcggcgtggaacctcgccgccgtgtgggtccagtactggctcttcgtctccgtctacgccggcttcccggcgctcagcgagaccagccagatctcaagacggcgcgccgacgatgacgaggcagcggcggcggcgcagccgcagaaggtggagcggctgtggatgacgatgctgccgtgctgggagtcgtgggcggtgtacgcgcggcaggaggtggtgctccccggcgtggcgctcgcgttcctctacttcaccgtgctgagcttcgggacgctgatgacggcgacgctggactgggaggggatcccggcatacgtgatcagcctcgcccgcggcgtcagcgccgccgtcggcatcgccgcgacgtgggtgtacccggcggcgcacgcccgcgtgtccacgctccgcgcgggcctctggtccatctgggcgcagtggtgctgcctcctcgtctgcgtcgcctccgtctgggccggcggcgccgcgccattggcgtcggcgtggatgctgatgggcggcgtggcggcgtcgcggctggggctgtggatgttcgacctagccgtgatgcagctgatgcaggacggcgtcccggagagcgaccggtgcgtcgtcggcggcgtgcagaactcgctgcagtccatgttcgacctgctcacctacgtcatgggcatcatcgtctccgaccccagggtaccaacaccatatcccccatgctgcacatggaaattaattgccacaataaaaattttttacataaaaacccgacctctacatccaacgaggatatatacacggcttattgcgatattggaaagaacattgcattgaagtcgtcgttcacgtggttctaaggaatcgggtataatctttcccgtcgatttttttttcaacaggatttcggcgagctgatcgtgctgtccttctttctcgtgacctgcgcggcggcaatgtacacgatgcatgtgtaccgggtgaggaagcatctgttccatctcgacaggatcctgcccaagatgaactggtgagctatttagcagctgcagagtgattaattcgaacacgatcgatgatattaatgttagtgacgttatacactgatgtgttcttcgttcttttttggtgccgttgcaggatcaaagcttcttgatatggcatcccgtgatcgataatgatgattcatcagtgattttctccagcaaattagtactgatcaatgctggatactgtacaattatctgctttggtttacttcaattttagacctgttcactggaacttttgctcaaaagatttgtggcatctggagaaatgccacatgttccatccaactggggcttgaagaatctccatgtaattaaccttacaataatatataagtactcgcttgatcccatgat</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0560000, RefSeq:Os06g0560000