Os05g0357200

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Revision as of 10:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0357200| Description = Mitochondrial substrate carrier family protein| Version = NM_001061831.1 GI:115463392 GeneID:4338524| Length = 3957 ...")
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Gene Name

Os05g0357200

Description

Mitochondrial substrate carrier family protein

Version

NM_001061831.1 GI:115463392 GeneID:4338524

Length

3957 bp

Definition

Oryza sativa Japonica Group Os05g0357200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:16905972..16909928

Sequence Coding Region

16906339..16906459,16906567..16906662,16907684..16907790,16908004..16908052,16908136..16908245
,16908607..16908701,16908802..16908890,16909053..16909147,16909254..16909502

Expression

GEO Profiles:Os05g0357200

Genome Context

<gbrowseImage1> name=NC_008398:16905972..16909928 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:16905972..16909928 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgggggacgtggcgacctcgccggcgccggcgccgccgtccgcgtcttcgcagcagagccaccacgccacctccgcccgcggcctgctctgccacgccgccgccggcgcctccgctggtgtggttgcggcgaccttcgtgtgcccgctcgatgtgatcaagacgaggtttcaggtgcacggctggcccaagctcgccaccggcacaattggaggtagtgtaataattggaagcttacaacagattgctcagagggaaggttttcggggaatgtatcgtggtttatctccaactattctggcactcttgcctaactgggcggtctattttactgtgtatgagcagcttaaaagcttgctttcttccaatgatagaagtcatcacctgtccttaggggcaaatgttattgctgcatcatgtgctggaggtgcaactactattgcaacaaatccactttgggttgtgaagacaagatttcagacccaagggatacgagctggggtgatcccgtacaaaggtacacttgctgctttgaagagaatagcacatgaagaaggcattcgtggactgtacagtggacttgtccctgccttggctggtatcagtcatgttgctattcagtttcctgcatatgagaagatcaaagcttatctggctgagcgagataatactacagtggaggcattaagttttggtgatgttgctgttgcttcatccctggcaaaagttgctgcgtcaaccttgacatatcctcatgaggttgttcgctcaaggttacaggagcagggagcacactccaaggcgagatatacaggtgtaatggactgcatcagaaaggtctatcatatagagggtttgaccggtttctaccgtggatgtgcaactaatctgttgcggacaactcctgccgcagtaataacatttaccagctttgagatgattcacaggttccttcttgatgtattccctcctttacctgaacagcaaccccaaccgctgaagcattga</cdnaseq>

Protein Sequence

<aaseq>MPGDVATSPAPAPPSASSQQSHHATSARGLLCHAAAGASAGVVA ATFVCPLDVIKTRFQVHGWPKLATGTIGGSVIIGSLQQIAQREGFRGMYRGLSPTILA LLPNWAVYFTVYEQLKSLLSSNDRSHHLSLGANVIAASCAGGATTIATNPLWVVKTRF QTQGIRAGVIPYKGTLAALKRIAHEEGIRGLYSGLVPALAGISHVAIQFPAYEKIKAY LAERDNTTVEALSFGDVAVASSLAKVAASTLTYPHEVVRSRLQEQGAHSKARYTGVMD CIRKVYHIEGLTGFYRGCATNLLRTTPAAVITFTSFEMIHRFLLDVFPPLPEQQPQPL KH</aaseq>

Gene Sequence

<dnaseqindica>368..488#596..691#1713..1819#2033..2081#2165..2274#2636..2730#2831..2919#3082..3176#3283..3531#gaggtgaggcgaggcgaggatgtcgtgacgacggaaaaacggagcagccgaggcgaggaagccgccaccgccaccgccgcgaccccaatgcgcgcgcctcccgccgcctcagatccccacccctaaccctagcctccgcctccgcccccgcctcgccgcctcctgctgccgcgacgagcgcgccacggacgtcgcgggcgaccccccggaggcggatgcgatcgggcgccctcgcgtagcgcccccgggcttcaccttctcctaggggtaggggagggtagcggtggctgtagccctagacgcggcggcgcgcggttccgtgccctgagggaggggaggagcagatcggtgtgtgtgtgggggagtgatgccgggggacgtggcgacctcgccggcgccggcgccgccgtccgcgtcttcgcagcagagccaccacgccacctccgcccgcggcctgctctgccacgccgccgccggcgcctccgctggtaacacatgaccgctcgagctatcttatccatttttttgggtcaatttgtgtgtttcggggatgcccatgtggagcaagcgttgaatttttggggcttgtccgcaggtgtggttgcggcgaccttcgtgtgcccgctcgatgtgatcaagacgaggtttcaggtgcacggctggcccaagctcgccaccggcacaattggaggtgcgtgtctcttcagaggaattcttgcgaatctttgcttgctacagtttgctgctgcagagctagagctgcacataaatctattatagactgcaatttctatcctatgcttgatgaagcatggtgagcacataggagtttgagcacttaaagtcagtgcatatagtggtcagaatatacagtggatgcatcatgcatgcaggggaatgatggtaaaccggtgcagattttgtgcctttctctttgtgtagctttactcggacacttccaggattcagggagttgagaaaatacttgtcggcaacgaaagatctgctctctgcttttagatgtcgtaacggtttcggattgcttgtttggacggttctgttatctgaggcttttgattggtctctcgttgttgttttgcgcaccttgaatctatcagtacctccaatcaaagtggggctgggagcttcacatgtgttgagcggaattgttgggaacttatgagatcgtgcacattgagaatggaaggaaagcatgcagcgtgctatttgctgttgcatgaattcgttgatgtatgataaaagcattagcatacatgaacatgtgaaaaaagccaacagactttgtgatgtccatgggtgtagtatagtgtgggtaatacttccaagcctggatttctgatgttattggtacacatttgctgaacctaaattgcctggaacatcagctgacgtacatgctttgaattcaaaaaatgttttagctgcattcatggatgctggcatatgtgtggcccgttatgctctgaagaatgccagcaggtcatcctatgtacgtggccaacagcattggtgcattgataatgcacttacttcgtactttttactgttgaatttgcatctttgtcaatagaagtttgatgagtagcatattttctgaaatgcttatgtctggactaaattgttttctactataccaagattcttcagaagctaaggtttattacatcagttctttgttctatcattactaggtagtgtaataattggaagcttacaacagattgctcagagggaaggttttcggggaatgtatcgtggtttatctccaactattctggcactcttgcctaactgggcggttagtctttacccttacattatagctccacttactccattgatgagatgtttttaaattctatgtaaaaagcaacgatgctaatgataatgctataagttgatctgcatgcaaacccatgtatggcaccgagtagagtagtacactacactatagatgaatcaagtgtctatgatctattgtggagctaatagtatccttgtggatttccaggtctattttactgtgtatgagcagcttaaaagcttgctttcttccaatggttagtgttttaccctgcatatgacttacttgacagcatatcatttgtcagttcttatgtggtatcgtacattcattttgcagatagaagtcatcacctgtccttaggggcaaatgttattgctgcatcatgtgctggaggtgcaactactattgcaacaaatccactttgggttgtgaagacaagatttcaggtatccttggaccacaacttgtctggaccagtagtcgatccaagacgcctgatagcataattgcaatttcaaaatgctgcataccaaatattttgtctggcctatattaggcaagtgtttaaaacctgtaagcaattcccatttctttcctaatgttgactgatggtctttacacaggctgaatgcccatttggaatggagctatcattaattataatcacttataaatatgctgaatttcttttagatcttttacctgtccatactaagcagtcaacatctacatgctatactcagacaaattgattcaaagattttattttgagtcatatcatcatctgtatccttttcccttttgtagacccaagggatacgagctggggtgatcccgtacaaaggtacacttgctgctttgaagagaatagcacatgaagaaggcattcgtggactgtacaggtagctttccatggaagtccacagatgcaagattttacaccgtttgatgataatatgttttgtgcgctggctgatatttttctttttcttttttataaagtggacttgtccctgccttggctggtatcagtcatgttgctattcagtttcctgcatatgagaagatcaaagcttatctggctgagcgaggtactctctcaacttctgtccttggctggtatcagtcatgttgctattcagtttcctgcacatgagaagatcaaagcttatctggcttgcacatgtttactacatttgtacactccagattgtgttttgttccacacatataacagcgtcatgctttaacagataatactacagtggaggcattaagttttggtgatgttgctgttgcttcatccctggcaaaagttgctgcgtcaaccttgacatatcctcatgaggtagagtcttttctttgaaattacgatgcatgccagtcttgtaataagtgtactgaactttgttctggccaactggtggctatatatctgaaatgattcgttacaggttgttcgctcaaggttacaggagcagggagcacactccaaggcgagatatacaggtgtaatggactgcatcagaaaggtctatcatatagagggtttgaccggtttctaccgtggatgtgcaactaatctgttgcggacaactcctgccgcagtaataacatttaccagctttgagatgattcacaggttccttcttgatgtattccctcctttacctgaacagcaaccccaaccgctgaagcattgattgtacaatccttgtgcccctatccatgttgtcactgttgagtagaaacccagtaaaaccatccatggacaccgtttacctttgttagaaggctctcctaaaagagattttgataatgcaacaggtagctaccactgaaagcacaaatcatagtgtaggacagtaattagcatttctgtgtgtattattacttttgatagcatgcaatgaggaggtatatgggtttagggctgtggggacatggtgattttggtggggtatgttgtccgatgatgatgatgatgaaaaaaaaaaagatactattatgtggatacaataattgctccattcattttattcctcttttatgattcgttttgtgatactgaactcaaatatgccttggagcagactggcagttttgttatataggagtactatatattt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0357200, RefSeq:Os05g0357200