Os05g0357600

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Revision as of 10:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0357600| Description = Similar to Developmentally regulated GTP binding protein| Version = NM_001061832.1 GI:115463394 GeneID:4338525| Leng...")
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Gene Name

Os05g0357600

Description

Similar to Developmentally regulated GTP binding protein

Version

NM_001061832.1 GI:115463394 GeneID:4338525

Length

5969 bp

Definition

Oryza sativa Japonica Group Os05g0357600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:16943930..16949898

Sequence Coding Region

16944463..16944532,16945295..16945362,16945596..16945672,16946188..16946368,16946470..16946526
,16947460..16947534,16948098..16948217,16948296..16948459,16948891..16949011
,16949096..16949266,16949368..16949463

Expression

GEO Profiles:Os05g0357600

Genome Context

<gbrowseImage1> name=NC_008398:16943930..16949898 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:16943930..16949898 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtatccttgagaggatcaaggagattgaagccgagatggctcggacacagaaaaataaagcaacagaataccatcttggacaactgaaagcaaaaatagcaaagttgaggacacaattattagagccccctaagggttccactggtggaggagatggttttgaagtcacaaagtttgggcatggtcgtgttgcacttattggatttcccagtgttggaaagtcaactcttttgactatgttgactgggacccattctgaagctgcatcatatgagttcacaaccctcacttgcattcctggtattatccagtacaatgataccaaaatccaacttcttgatcttcctggtatcattgaaggtgcatcagaaggcaaggggcgtggtagacaggtcattgctgtcgcaaagtcatcagatcttgtgctcatggttctggatgcctcaaaaagtgaaggacaccgccaaatattaactagagaactggaagctgttggacttcgtctgaacaaaaggcctcctcagatatatttcaaaaagaagaagactggtggaatttctttcaacagcatgattcccttgacccatgttgatgagaagctctgctatcagatactgcatgagtacaaaattcacaacgcagaggtgttattccgcgaggatgctaccgtggatgacttcatcgatgttattgaaggaaatcggaagtacataaaatgtgtttatgtatataacaagattgatgttgttggtattgatgatgtggataagcttgctcggcaaccaaattcgcttgtgatcagctgcaatttgcagctaaacttggacaggctactagcaagaatgtgggaggaaatggggctagtgagagtgtatacaaagccacaaggacagcaacctgatttcacagatccagttgttctttctactgatagaggtggctgcacagttgaagacttctgcaaccatatccataggagtttggtcaaggatgtgaagtatgtacttgtatggggaacaagtgcgaggcattacccgcaacattgtgggcttggccatgttcttcaagacgaggatgtcgtccagatagtaaagaagaaggagaaggaggacggcggtcgaggccgcttcaagtcgcacacaaacgcgcccgctcgcatatccgacagggagaagaaagctcctctgaagacctga</cdnaseq>

Protein Sequence

<aaseq>MGILERIKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQLLEP PKGSTGGGDGFEVTKFGHGRVALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPG IIQYNDTKIQLLDLPGIIEGASEGKGRGRQVIAVAKSSDLVLMVLDASKSEGHRQILT RELEAVGLRLNKRPPQIYFKKKKTGGISFNSMIPLTHVDEKLCYQILHEYKIHNAEVL FREDATVDDFIDVIEGNRKYIKCVYVYNKIDVVGIDDVDKLARQPNSLVISCNLQLNL DRLLARMWEEMGLVRVYTKPQGQQPDFTDPVVLSTDRGGCTVEDFCNHIHRSLVKDVK YVLVWGTSARHYPQHCGLGHVLQDEDVVQIVKKKEKEDGGRGRFKSHTNAPARISDRE KKAPLKT</aaseq>

Gene Sequence

<dnaseqindica>534..603#1366..1433#1667..1743#2259..2439#2541..2597#3531..3605#4169..4288#4367..4530#4962..5082#5167..5337#5439..5534#ctccgctccttgcgccgccgccaagacgagtcgcggctgaacagaacaggggaggggcggcgatctccatctggcgagcgagcagagcagggcaggggaggggatcctggtgagcatccacatcctctttctctttctgattcatctctctcccacctcaccgggactacttttgtctggaatttgcttgcgcgcgtgcgttcgtaaaccctagcttctcttgtagatctggaagaaagctcttcttcctctttaatctgagagccttaaacctctattcttaatacaactagtaacagtttgtttgttcacccaaaaagtttggggatccgcccctgttagtgttaaggggttttccgtcttgcccttgccaaagtctagccttcaatactgggggtctagggatggagctgtcgggcagcctcagatgcttgcacaaatcactgcattgtaattcttttgtttcttttattctgcgacaggtcgtatattcacctaccttggagtaattcgcatacgtcacaagttaaaagatgggtatccttgagaggatcaaggagattgaagccgagatggctcggacacagaaaaataaagcaacaggttgttttttattttaatacaaccctgtaattcatcttcattccttcatattatttttttttcgtttctttcatcatgaaactatactagcatgtttcactgggtcagtgattgatataaaaattaacttggtggattggatggatgtcaaatgagcatcgcaagtatatgtttattttcaggattttttacttcattatttgctgcttaattagttatactggccactgacgattctcaaccttccagtttattttgttgctaaaatttctcttcatgttggtattcagtgttatggacatttggatcaatgatggccagtgggccatttatttgtgcatccactagtcaatgttcagatccgaaattgttgatttgttgccacatgttctttgcttggcacaaattcatccatgttatgacgagtggactcagggaattcgtcttttattgcctgatttatgtttactgcataccctgctttatccattttctgattgacacacactatactcgtccagtatcaacagtcagatgccaaatttgttgctagaagaacaggcataactgagtaattgagtatctctgtttgcatatatgcaatttatgtatctgaacgtgaacttgctattaacaatgttgtatttagctaatgaacgattatctctgatctcttacattcccacccatactcaatactgtgtgagaaatgtcttgcatattgttatctgggaataatttttatttctggttgtcatacagaataccatcttggacaactgaaagcaaaaatagcaaagttgaggacacaattattagagccccctaaggtatttatgacgtttgagcatttatttgaaatattttgttgcaagtagggtatggaattacaagttcttttgttatttgaaatatttgaaatatcatgttgatatttccttttgttattatttttcatcttgatcatatccttacaagttcttttggtaatataaaaagttgacatagtcatgggaattccatggatttctgttgtcacatctgcatcattttggtcacatagggttccactggtggaggagatggttttgaagtcacaaagtttgggcatggtcgtgttgcacttattggatttcccaggtctctcctccgcctacatccctataaattgagtaccctaaaatcctgtgtttcaagcctttcagtttgtagcgatagatttagaattcatggagtctgttatgatcagtataactgtataagaacctggtgtaatataatcttctcgatatattgtttcctcccttgtattcttgtgcatgccattccagctcttacgaactattggctgccttgtattcttgtgcatgcctgtcttctaactcttccatctaatgacttgaaaaagaacgatgggaatttgatatctaaatatcttaattggtagaacgatggattacccatgataaattggtattccatgttgtattccatatactttctagcatgcatgtgagcacgttgtttgttaagttcaatttaagatgaaaacatctatgtcccaactctctactaaaaactgttgagtcccaatctttttcttttctcaggtttattaaatcactgtgatttccgtgttgaaatttatgttgcagtgttggaaagtcaactcttttgactatgttgactgggacccattctgaagctgcatcatatgagttcacaaccctcacttgcattcctggtattatccagtacaatgataccaaaatccaacttcttgatcttcctggtatcattgaaggtgcatcagaaggcaaggggcgtggtagacaggtaaattttgtgaatgtttttattatcacaatgtgtacggtgcatctgtgtctttttacccaaaaataacttgtatttaatttttattttaatcattttaggtcattgctgtcgcaaagtcatcagatcttgtgctcatggttctggatgcctcaaaagtaagtagtgtagctgtatcggctttgcttcattgcttttctagtcctttactttgttgaagagctaatgttcttaaagattggaaagggtccgatgtacttttttctcttttgtagtgtgattgtccatccatcatgatagactagaaaatcagtctcagtcatcgtagttttgatataattctgaactcaggactagctaaacaacaccttttactagcagaatattttaaagtatccacattttcaattaagccttctgttgttagaatgctcaactgtcttactctgcaagcacctgcatatattttataatgataaaattatcttacttgaggtaactttgagctttaggaaactaaaagtttgaaaacctaaaagttaggagacaagaaacaaggggttgtgacctgtaaacaatagataaataggggaaattatgaatttaaagttgacaatatagggcaaacaatcatgtgataagctcaacacttggctacttattcaccaaggccatttttcttttttaacattgcatatctccttcactagatgttttttttctcttttcttaataaaaactcctgtaatattactagtaaaataggtgaacttcaagttcagttgagtgctcatgtttgctattttgtaaatatgtcctataaagacaggaaattttatacactgtctttaaatgaatctatcaattttatagttgcttgaaagttcttagaagattttagtggagagtttgttaaggttagattgatgcaaatcaagaggcggggtttgatggagttccttttcttttcttaatgaaaaaaatgttacaattacatccaatctttccccttctatatgtgattgaacatgatccaagctttacctgagctctgtttgcttattggattcttgttctgaatttcatttcagagtgaaggacaccgccaaatattaactagagaactggaagctgttggacttcgtctgaacaaaaggcctcctcaggtagtgcttagggcgaaattagaattcaacattgaaaacgcaagatggacaatttggggctcaaacaacattcgtttcatctgattccatttccaacaaatgaaccaatttgcatgacatcttgagcatcatgtgcttgattaggattaattccaggtgtatcattatcatcttggtaaaatatacatttgcctacataagaaaacagtacgtgaaccgtggagtggcaagccagggttgactgcagattccccttgccatgtcagataatttgtcaaactactgatagtaaatataacagtgctaagtcattctgcacatagatctgcaagtatatcataaatcactcttcagcaagcttctgtggactatttgaaccatgtaactctgctgactagttccttgaatcaagtcttacatatggtgtacctgagtcatgtttatacagttggtgttgctctttctaaatcatattctttgttgctaatgaatcatttcgtatgtgtatctgtactgtttattttccctggtctattattaatcacttctgcttgtatgaacagatatatttcaaaaagaagaagactggtggaatttctttcaacagcatgattcccttgacccatgttgatgagaagctctgctatcagatactgcatgagtacaaaattcacaacgcagaggtcacacacgcactcttatgattgtgtatgtgtgtgtttgtgcacgcatgattaacacagttatttggttttctttaggtgttattccgcgaggatgctaccgtggatgacttcatcgatgttattgaaggaaatcggaagtacataaaatgtgtttatgtatataacaagattgatgttgttggtattgatgatgtggataagcttgctcggcaaccaaattcgcttgtgatcagctgcaatttgcaggcatgttatatatcttctgtttactctctcagttaaattttggctgccatcgtttggcatattttcagaatatgccaaatggcatatttgcaaacgagtagcagtttgtgaataaaacttttatatatgtgttcttatcgatccaaaagcaaaggctgaaaaataaacttcgatgaaaaaaccccaaaatcagctccaaatttaacattgaaaattcaaattttggctgataagcataagcatatgccaaacgatggggacctttatatccttctcaagttatttctggtacttcccttgggccttgtgtgatgtgagcatcttgaaaaccgcagtgcacgcagaagtattgagttttctgtccccaattggttctcttttccattttgtggttctttatcttgaatttaacataaactatttctttgcagctaaacttggacaggctactagcaagaatgtgggaggaaatggggctagtgagagtgtatacaaagccacaaggacagcaacctgatttcacagatccagttgttctttctactgtaagctttatttgttgtcatgccttgcactacttgttctaaaggactgcaatatgtttgatgacttgggttttgtgtcaacaggatagaggtggctgcacagttgaagacttctgcaaccatatccataggagtttggtcaaggatgtgaagtatgtacttgtatggggaacaagtgcgaggcattacccgcaacattgtgggcttggccatgttcttcaagacgaggatgtcgtccagatagtaaagaagaaggtttactttcatcacacttaaaaacatcaaaattaactcttaaggtggtgtttctatcaataattgaaatggtgctaaatctatgacctaaaaacttccaggagaaggaggacggcggtcgaggccgcttcaagtcgcacacaaacgcgcccgctcgcatatccgacagggagaagaaagctcctctgaagacctgaatgtggacatgaaaccgcagttttgtcggctgtgccaacatcaaaatagagctacttttttgcctggagctggttgagctgtgcgctacttttttcaatgtggagccctgttttgtgccttcagaagggccatacttgagtactcgcctggttccgttcctcctgtatctctctgcagaacacacctttgcagtgcaactatgaacatcattgtgtatctgtgcaccattgcaaatacgggcggcaaatggatgtgctgcgcttgtgttagaatgtggtgataatgtccaatatccaatgtggacgaagatgctcactgcagtgcaaccatgaactaataaatgcatatatgaggagcatggcacaagctcaaatctggaccgttaattcaaaacggatgatgcgtcttataaagtgagtataaggcttgtactg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0357600, RefSeq:Os05g0357600