Os05g0358400

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Revision as of 10:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0358400| Description = Conserved hypothetical protein| Version = NM_001061837.1 GI:115463404 GeneID:4338530| Length = 3123 bp| Definition ...")
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Gene Name

Os05g0358400

Description

Conserved hypothetical protein

Version

NM_001061837.1 GI:115463404 GeneID:4338530

Length

3123 bp

Definition

Oryza sativa Japonica Group Os05g0358400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:16992457..16995579

Sequence Coding Region

16992477..16992789,16992864..16992994,16993456..16993533,16993643..16993687,16993860..16993904
,16994005..16994056,16994538..16994634,16995050..16995215

Expression

GEO Profiles:Os05g0358400

Genome Context

<gbrowseImage1> name=NC_008398:16992457..16995579 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:16992457..16995579 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgtggcgtcgccgcatccgcctgcacgctccgccctgggccacccggagccgtccgatcaaaatccaacggcccggatcgcctcagccacctccccacgcggcccctctcggctccccgcctccacctccggcgatcgccggagcccacccaccgccgcctccccctcatggcttcctccccctccgcggccgccacaggtagcggaggctccttccctgagatgaactcggtcgacgacttcgccgcggtcaccgcccctcgcggcggcggccgcgtatccgtcgtcggcttcggctccctcctctccgagcggagcgcgaggagcacgttcccggagctggaggggttccgggtggcggcgctgcgcgggttccgccgcgtcttcgcccactccgccccgatcttcttcgagcgcggcatcgccatcgaggccaccaaggagttctcaagcttaagtgtggagccatgtgagggtgaactgatcgttgtcactgtgtttgaaataaaggaggatgaggtcccagcattcatcgagagggagcatgagtttaggtttcttgcggttgttccagaaggactggatggggtgccttatgcaaatccagcagttgtctgtgcacgctatagcgatgaagaatatttccaagtgagatgcaaaggaagcaaggaaatatattatcagcgctatggccgatacaacattgatagaatatggagagacgatattttaccctgtcgtgcttatcttagacattgtgtcctcgctgcgaaaaatcttggagaaccagcatacagcaacttcctagaccacacctatctgggtgaccggacaaccacaataagggaatacctggccactaccggagccggcatcatggaagaggagcctccagaatcgctaaaaagccgctatggcgggtag</cdnaseq>

Protein Sequence

<aaseq>MRGVAASACTLRPGPPGAVRSKSNGPDRLSHLPTRPLSAPRLHL RRSPEPTHRRLPLMASSPSAAATGSGGSFPEMNSVDDFAAVTAPRGGGRVSVVGFGSL LSERSARSTFPELEGFRVAALRGFRRVFAHSAPIFFERGIAIEATKEFSSLSVEPCEG ELIVVTVFEIKEDEVPAFIEREHEFRFLAVVPEGLDGVPYANPAVVCARYSDEEYFQV RCKGSKEIYYQRYGRYNIDRIWRDDILPCRAYLRHCVLAAKNLGEPAYSNFLDHTYLG DRTTTIREYLATTGAGIMEEEPPESLKSRYGG</aaseq>

Gene Sequence

<dnaseqindica>21..333#408..538#1000..1077#1187..1231#1404..1448#1549..1600#2082..2178#2594..2759#atagtcatcaaaacagaataatgcgtggcgtcgccgcatccgcctgcacgctccgccctgggccacccggagccgtccgatcaaaatccaacggcccggatcgcctcagccacctccccacgcggcccctctcggctccccgcctccacctccggcgatcgccggagcccacccaccgccgcctccccctcatggcttcctccccctccgcggccgccacaggtagcggaggctccttccctgagatgaactcggtcgacgacttcgccgcggtcaccgcccctcgcggcggcggccgcgtatccgtcgtcggcttcggctccctcctctccggtgagcacctcacttccgccaccgccgccgccgcccaacgctggattcccctgaacccccttcctgagtcgcagagcggagcgcgaggagcacgttcccggagctggaggggttccgggtggcggcgctgcgcgggttccgccgcgtcttcgcccactccgccccgatcttcttcgagcgcggcatcgccatcgaggccaccaaggtcagggactcagttgctactgttagagtgtgcgctgcagactgtagatgctaaaaagaagcaaaagaaatggagctacaagttgattaccatatgaaatgaaactatcgaatcacatgtttctcaatttggaatggaattatagtttggcgtgacatcaaaagtgggggaaactactacctaggctataaggttgcattttacaagcatgataaaatttagtttctgcttgagtgagcttttctgcaatatgcatttggggattgtttgcttttgctcattatggccagtgaacgaatggaagcagagtgcttttttaagctatgaaaaaaaaattctgtgattgatttgtttgattgaagttgtgtagtctagtaagtgcttttgttaggaatctgcatttgcttcttggatttatgataaatctctcattttcactggagcaccggactgacttgtaggagttctcaagcttaagtgtggagccatgtgagggtgaactgatcgttgtcactgtgtttgaaataaaggaggatgaggtattgtggtttataccctgtgataatgcttcacatctgttaaggcaaaggaatggagcttttttgaacctatttttgctgaggaaggattgaaaagtgatattttcaggtcccagcattcatcgagagggagcatgagtttaggtttcttgcggtaggtgccaaataattcattggatgctaacctatttagttagattttcagtttcttcattggaaacctcaagctgtttggagcttagattttttaagtcctggtctgtaatttaggctgtcttttatgattatttgcagttaatttttctttatctctaatatgctgtcaggttgttccagaaggactggatggggtgccttatgcaaatccagcagtaagggcttatattctgttactgcaattctagctgtagtgtcttgttttgttcagctgctgccccctgcaatggaattattttttctgctttgattcaggttgtctgtgcacgctatagcgatgaagaatatttccaagtgagatgcaaaggttgaatctatatcacaaccagattttctcatcagttgtacatttcattttaatatcttgccattgactatactggtatggatatctgtgttatgacaattctggacagttagtgttactcttgtttcgtatgttgatgaggtttcataatttggttacagtgttaggtctattacaggatataaattgttcgtgttttgagtaaagactaatctgttcttgacttcatctgacatcctatcagattctataagattgttgttatgtgtgcttttttttaactgtgaatactgggacatttagttgatttcctttgtcagatattagatttattgtgttagtttggatgcttcccttacacgtccatgtcaaattaatgcattcttaggcaggtgtaaggtatttactttcagggattgcagtagacagctcagaattataattttgtgtctaattccatactacatgattctttctgtaggaagcaaggaaatatattatcagcgctatggccgatacaacattgatagaatatggagagacgatattttaccctgtcgtgcttatcttagacattggtgagtgctttctgttctaacatcttatgtgcagtctgcagagttgtttttttagtaacttaaattggcctatgattaacatcataaaatgtatcttgttctatttgaaaccactgaacacctatcaactgattaactccactggttaggcattttatttttttattccagtgggtacagcccatcgatggcatgtcaaagcaagatgcatttctaaccaaaatgctattgctttgggtcatctcaaagtgagatgcatttctgaagcaaagggaaatcattgttttgaactatccattagcagcacattttctattgaaatgtcattatcagccattactttgttaggcatgttgaatcttggccattctgctattagagtcgcctttcacgatactgattgcttaatttgcagtgtcctcgctgcgaaaaatcttggagaaccagcatacagcaacttcctagaccacacctatctgggtgaccggacaaccacaataagggaatacctggccactaccggagccggcatcatggaagaggagcctccagaatcgctaaaaagccgctatggcgggtagctagcgagctagctagctccacgaagacgactccgtcgactcccacagccaccatggatcgaacttccatccgcttcgctgtcgctcaaatctgacggttggtggtgttcctcacaattctgctaaataatccctgatgcttcagtgcataatactaccaaaattccaatttttcgggccacatagtgttcagactttcagaggaagattgtgattcatgaccctcttcatgggagagttgaatgattgatgtaccacaacaataacagtgactattttgtcaccaccaccaccaccacagaaattctggagccatatgatacatgcagaaaaaaaaaaatgaggacaaaatgcatcttttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0358400, RefSeq:Os05g0358400