Os05g0358500

From RiceWiki
Revision as of 10:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0358500| Description = Protein phosphatase 2C-like domain containing protein| Version = NM_001061838.1 GI:115463406 GeneID:4338531| Length ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0358500

Description

Protein phosphatase 2C-like domain containing protein

Version

NM_001061838.1 GI:115463406 GeneID:4338531

Length

3900 bp

Definition

Oryza sativa Japonica Group Os05g0358500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:16995803..16999702

Sequence Coding Region

16995885..16996064,16996367..16996590,16996936..16997368,16999065..16999289

Expression

GEO Profiles:Os05g0358500

Genome Context

<gbrowseImage1> name=NC_008398:16995803..16999702 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:16995803..16999702 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggcacatctcgtcgctgctgcaggggctggcgcgctcgctgtcggtggggaaggagaggaagggcggcgacggcgacgacgggaaggcggcggcggcgacggcgacggcggtgctgaggacatcggggacgctgtggggcgagggctctgagacgttcgccgccgtctgctcccgccgcggcgagaagggcatcaaccaggactgctccatcgtctgcgagggattcgggtgcgaggaggggagcgtgttgtgcggcatcttcgacgggcacgggcagtggggccactacgtggcgaaggcggtgagggagtcgctgccgccggcgctgctccggcggtggcgggaggccgtgacgctggcggcgctcatcgacggcggcgagaagcggctctgcgagtgccggcccgacctgtggcgccagtcctacctggccgcctgcgccgccgtcgacgccgagctccgcgccagccgccgcctcgacgccgtccacagcggctgcaccgcgctgtccctcgtcaagcacggcgacctcctcgtcgtcgccaacgtcggcgactcgcgcgccgtcctggccaccgcctcccccgacgacggtggcggcgcccgcctcgccgccgtgcagctcaccgtcgacttcaagcccaacctgccccaggagagggagaggatcatggagtgcaacgggagggtgcagtgcctcgccgacgagcccggggtgcaccgggtgtggcggccggacagggagggcccaggcctcgccatgtcgcgcgccttcggcgactactgcgtcaaggattacggcgtcatctcggcgccggaggtgacgcaccgccggatcaccgcccaggaccacttcgtcatcctcgccaccgacggggtgtgggacgtggtgtcgaacgaggaggcggtgcagatcgtggcgtcggcgccggagagggagaaggcggcgaagcggctcgtcgagttcgccgtccgggcatggaggcgcaagcgccggggcatcgccgtcgacgactgctcggcgatctgcctcttcttccactcgccgccgtcctaa</cdnaseq>

Protein Sequence

<aaseq>MRHISSLLQGLARSLSVGKERKGGDGDDGKAAAATATAVLRTSG TLWGEGSETFAAVCSRRGEKGINQDCSIVCEGFGCEEGSVLCGIFDGHGQWGHYVAKA VRESLPPALLRRWREAVTLAALIDGGEKRLCECRPDLWRQSYLAACAAVDAELRASRR LDAVHSGCTALSLVKHGDLLVVANVGDSRAVLATASPDDGGGARLAAVQLTVDFKPNL PQERERIMECNGRVQCLADEPGVHRVWRPDREGPGLAMSRAFGDYCVKDYGVISAPEV THRRITAQDHFVILATDGVWDVVSNEEAVQIVASAPEREKAAKRLVEFAVRAWRRKRR GIAVDDCSAICLFFHSPPS</aaseq>

Gene Sequence

<dnaseqindica>3639..3818#3113..3336#2335..2767#414..638#acgctcgctccatcgattccttgttctagtgtttctattttttatttttggctcaagtttctagcgtttcttgatctgctgctctgcttggttgcgtttcttgatttggttgggattggttgttcttgggcttatcctgtgtagcccgtttcttggattcaaagctcagctcaggtgggaaggaagacaaagatcccacctggtgaaaacgtacggcgcagccgcagatcgattaattttcgcggaagcgtccccggccatggttgctgccctcaggccgcaggtgctgatctcttcttcaagataggaagcgaaacagagcagagcctgctcgtggaaggagaagctgagtttggctctgcagctgagactatccatctgcgacgaggaggaagaagaaggagctagcgaggatgcggcacatctcgtcgctgctgcaggggctggcgcgctcgctgtcggtggggaaggagaggaagggcggcgacggcgacgacgggaaggcggcggcggcgacggcgacggcggtgctgaggacatcggggacgctgtggggcgagggctctgagacgttcgccgccgtctgctcccgccgcggcgagaagggcatcaaccaggactgctccatcgtctgcgaggtcagtcagattctgctctcctctgcttcttgttcttgctactttgctctctctctgatctgcttgtgaaacaatgatatgatcacaattattggtggcatattagcacgtagtaactagtaacaacaatacaaatggcacatgagagaattccaacatgttaagaaaaagaaagaaattatttctttggttcatatttacagctgatttactactagtcgtctcaaatatggttcgattcaactgttgtttcttttcaccgaccatgtttttcttatggtgagattttgtccatggtgtcatgattcattgtcctcatctatgtgctctaaaaaaaaaatcttctttttctttttctcaaaaaataaaaaaaaagcggagaatactactgtggtaggactagctcttctcatttctgaccacacaagaaagcaaacaaacttcctgttcttatgtactttctattgacttctctctcgattgttcacctaatcttgtgttttagttcgctttgttctcttcatgacaattaacactatttttattattagtccattaactaactagaccagtgattgattaacgacagggtcaatttcagggtcagttaatacatagtttttgaggcatgttgttttaccaagttcttggatctggtgtttgtttttggcttctaggggttttctgatctgtgccaaaagggtcactgattacgtgtcatttatttgctgaagaaacaaggtgttttgggttctttggtatatctcacctttttcagtttgttggtgtctgggattctaaagctgcttttggttagttaaactctgtggctaaggtggatgcatggaaagtagatcacatcaacacattcttgagagttcttcctagatatgatttttggatataatagtttgttatcatcataaaaaggagagagaagagagagaaggaccttcaattagaggatatgtttttcttttcttaatatttacagcagtcattatgtaatgttcacaagcctttcttttttctttataatattgtaaaccagtaagaggtatcatagaataaacagcactggacaaatttggaaggacaggctgcaattagaaaaaatgatcgctcttttctattttatttatttatttattttgcaaccaaaggagtaaggacaaccatgacctaccagctctcaaaagctggcttggttcagttggttcaccatgatgtcacaatggaatctttaattttttgcattaacatgcatgattgtaccctagaacgttaaacaaatactcagagcagaaccacacacgtaatgtcaaaacaccgcaaaacaaaaacgaaaaaaaaaatcaacaagaacaatgtacaatttgatcatattggcttcgtactattccatccatttcttattacaagacgttttattttttttcctaaagctagcaacatttataatatcaaattagtcttattataacagcatttaatatattttgataatatgctagttttgtgtcaaaaatattttttaaaaaaattgattaaatttttaaaagtttaactagaaacaaatgaaaaggacttgtactataaaatagagggagtacaaaatttgacaaaaaaaacaagtaaatattagatttttgagctgaattctgaaccaaagcaaatttgtcttgtgtgtggtcagggattcgggtgcgaggaggggagcgtgttgtgcggcatcttcgacgggcacgggcagtggggccactacgtggcgaaggcggtgagggagtcgctgccgccggcgctgctccggcggtggcgggaggccgtgacgctggcggcgctcatcgacggcggcgagaagcggctctgcgagtgccggcccgacctgtggcgccagtcctacctggccgcctgcgccgccgtcgacgccgagctccgcgccagccgccgcctcgacgccgtccacagcggctgcaccgcgctgtccctcgtcaagcacggcgacctcctcgtcgtcgccaacgtcggcgactcgcgcgccgtcctggccaccgcctcccccgacgacggtggcggcgcccgcctcgccgccgtgcagctcaccgtcgacttcaagcccaacctgccccgtaagttcgccgtcaaacactcacggagacatcttccagtcgtttacatgttataaaaaaattaaaataataaattaatatataatagattactccctgcaaaaaaaaatgtttttctacaacttgtataagttatttattttaaagacaacttgtataagttaaacttgaatggagtcatttatcacatattaagctacgttattgttttctaaaacctttttataaccatttacatgacataaccaacgagaggatgtctctctggagtttagaataatttctctgcttaatataagagtatgtcctaccgctattgctgatgtttgcattgcgtggatgcagaggagagggagaggatcatggagtgcaacgggagggtgcagtgcctcgccgacgagcccggggtgcaccgggtgtggcggccggacagggagggcccaggcctcgccatgtcgcgcgccttcggcgactactgcgtcaaggattacggcgtcatctcggcgccggaggtgacgcaccgccggatcaccgcccaggaccacttcgtcatcctcgccaccgacggggtaaacaaacaaacaaaatacatatacttatcatctctattttttttaatatatgacatccttaattcttattaaaaaaatttaagtaaatatcttgttttttttacttgatttatcgaattttaagcaatattaatatttttaagatttgcatatattcttttaaataagacgaataatcaaatgttacaaaagaaaatcatcaatgttatatattaagaaatggagagagtacaaaataaaattcattccatttttttaggacaaacatctcaacttgttcgtcttcgtctgcgcggcaggtgtgggacgtggtgtcgaacgaggaggcggtgcagatcgtggcgtcggcgccggagagggagaaggcggcgaagcggctcgtcgagttcgccgtccgggcatggaggcgcaagcgccggggcatcgccgtcgacgactgctcggcgatctgcctcttcttccactcgccgccgtcctaaacaacacacacgctgacacgcacgcagccaacaaaaaccgcacacgccgacgacaatgtcgccgtcgtcgttgagaggcgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0358500, RefSeq:Os05g0358500