Os05g0359500

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Revision as of 10:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0359500| Description = Similar to RING-H2 finger protein ATL5C precursor| Version = NM_001061840.1 GI:115463410 GeneID:4338533| Length = 67...")
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Gene Name

Os05g0359500

Description

Similar to RING-H2 finger protein ATL5C precursor

Version

NM_001061840.1 GI:115463410 GeneID:4338533

Length

672 bp

Definition

Oryza sativa Japonica Group Os05g0359500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:17106167..17106838

Sequence Coding Region

17106167..17106838

Expression

GEO Profiles:Os05g0359500

Genome Context

<gbrowseImage1> name=NC_008398:17106167..17106838 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:17106167..17106838 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacggtggcggcggcgcggggggtgacgtcagcggcggcgagcggtgggcgccgagcgggcggcagctcacggcgagcctcgtcgggctcaatgtcttcgtcgtcctgctcatctactactacctctggcgattcttctccggcaagagcgacggcggcgtcccgggcggtggcggcggcggcgacgacgaggacgcggagtcgttggcggcgccgtcgcgggctgtgtcgcccaagccgcgggaccgggaggcgatggagctcgccatcaccgcgttgcccgtcttcgtcgtgcacgttcccaccccctccgacaactccggcgacggcggcggcggcgcgggcgatgctgcagctgctgacgctaacggcggcggcggcggcggcggcaaggtgttggagtgcgcgatctgcatcgcggagttcgccgacggcgaggaggggcggctgctgccgcggtgcgggcaccggttccacgcgcggtgcgtcgacatgtggttccagctccactccacctgcccgctctgccgcgccggcgtcctgccgccggctccagcgccgccgtgtcccaccaccgcgccgcacgacgacgacggccagcagcaggtcgtcgcgccaccgccggatcacacagacgacacgaataggacagacaattgtcccgtgtga</cdnaseq>

Protein Sequence

<aaseq>MDGGGGAGGDVSGGERWAPSGRQLTASLVGLNVFVVLLIYYYLW RFFSGKSDGGVPGGGGGGDDEDAESLAAPSRAVSPKPRDREAMELAITALPVFVVHVP TPSDNSGDGGGGAGDAAAADANGGGGGGGKVLECAICIAEFADGEEGRLLPRCGHRFH ARCVDMWFQLHSTCPLCRAGVLPPAPAPPCPTTAPHDDDGQQQVVAPPPDHTDDTNRT DNCPV</aaseq>

Gene Sequence

<dnaseqindica>1..672#atggacggtggcggcggcgcggggggtgacgtcagcggcggcgagcggtgggcgccgagcgggcggcagctcacggcgagcctcgtcgggctcaatgtcttcgtcgtcctgctcatctactactacctctggcgattcttctccggcaagagcgacggcggcgtcccgggcggtggcggcggcggcgacgacgaggacgcggagtcgttggcggcgccgtcgcgggctgtgtcgcccaagccgcgggaccgggaggcgatggagctcgccatcaccgcgttgcccgtcttcgtcgtgcacgttcccaccccctccgacaactccggcgacggcggcggcggcgcgggcgatgctgcagctgctgacgctaacggcggcggcggcggcggcggcaaggtgttggagtgcgcgatctgcatcgcggagttcgccgacggcgaggaggggcggctgctgccgcggtgcgggcaccggttccacgcgcggtgcgtcgacatgtggttccagctccactccacctgcccgctctgccgcgccggcgtcctgccgccggctccagcgccgccgtgtcccaccaccgcgccgcacgacgacgacggccagcagcaggtcgtcgcgccaccgccggatcacacagacgacacgaataggacagacaattgtcccgtgtga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0359500, RefSeq:Os05g0359500