Os05g0361200

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Revision as of 10:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0361200| Description = Similar to Ferrochelatase| Version = NM_001061844.1 GI:115463418 GeneID:4338537| Length = 6606 bp| Definition = Ory...")
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Gene Name

Os05g0361200

Description

Similar to Ferrochelatase

Version

NM_001061844.1 GI:115463418 GeneID:4338537

Length

6606 bp

Definition

Oryza sativa Japonica Group Os05g0361200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:17216411..17223016

Sequence Coding Region

17216814..17216920,17217968..17218283,17218644..17218787,17219918..17220019,17220423..17220526
,17220608..17220734,17220874..17221026,17221326..17221426,17221603..17221804
,17222310..17222534

Expression

GEO Profiles:Os05g0361200

Genome Context

<gbrowseImage1> name=NC_008398:17216411..17223016 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:17216411..17223016 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtggtcgtcgagccaggcgagcacgaggggcgtgattgaggtggggagggtggaggcggggccttcccatttccccaagaggcccgcgccgcggaattcctccagggtcaatctgtcaaggacatatgcaattaaatcttgttcagtgagtagccgtacagggctttgccttggacaatgttatcataagaagtcttctgcttgcaaatgcaagttgggatggtcttctcaaccactgtctagcttgaggcatcacttaagagtacattcatcagcatcggaggcggttcttacttcccaatctgatttcacaaaacttcttgttgggaatgaaaaaattggtgttctcttgctgaatcttggaggtccagagacccttgatgatgtgcagcctttcttgtttaatctatttgctgatccggacattatccgtcttcctagattgtttcgctttcttcagaagccattagcacaatttatatctgttgtaagagcaccaaagagcaaggaaggctatgcatccatcggtggtggttctcctcttcgtcaaattactgatgcacaggctgaagcactgaggaaagcattatgtgataaagatattcctgccaaggtgtatgttggaatgcgttactggcatccattcactgaggaagctatagaacaaataaaacgggatggcatcacaaaacttgttgtacttcctctgtacccccagttctccatatcaactagtggttcaagtctccgtttactggagggcatattcagagaggatgagtatctggtgaatatgcagcatacagttataccttcctggtatcagagggagggatatatcaaggctatggcaactttgattgagaaggaactgcgaacattttcagaaccccaaaaggttatgatatttttcagtgcccatggagttcctctggcatatgtagaagaagctggtgatccatacaaagcagagatggaagagtgtgtggatcttatcatggaggaactcgaaaaaagaggaataacaaactcatgcacacttgcctatcagagccgagtggggccagttgaatggctgaggccctacactgatgagacaattatcgagttggggcagaaaggggtgaagagccttctagctgttcccatcagttttgtcagtgaacatattgaaactttggaagaaatcgatgtagaatacaaggagttggctttagaatccggcatcaagcactggggacgagttcctgcattaggttgtgaacccacgttcataacagatcttgccgatgctgttattgaaagcttgccttatgttggtgctatggcagtttcaaaccttgaagctcgacagccactggtgccacttgggagtgtggaagaactgctagcggcgtacgactcgaaacgcgacgagctgccccctccagtgactgtatgggagtggggctggacgaagagcgcggagacctggaatggacgggctgctatgctggccgtgctggctctcctagtgctggaggtgacaaccggagaagggttcttgcaccagtggggcatcctgcctttgttccactga</cdnaseq>

Protein Sequence

<aaseq>MWSSSQASTRGVIEVGRVEAGPSHFPKRPAPRNSSRVNLSRTYA IKSCSVSSRTGLCLGQCYHKKSSACKCKLGWSSQPLSSLRHHLRVHSSASEAVLTSQS DFTKLLVGNEKIGVLLLNLGGPETLDDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQF ISVVRAPKSKEGYASIGGGSPLRQITDAQAEALRKALCDKDIPAKVYVGMRYWHPFTE EAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLEGIFREDEYLVNMQHTVIPSWYQ REGYIKAMATLIEKELRTFSEPQKVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIM EELEKRGITNSCTLAYQSRVGPVEWLRPYTDETIIELGQKGVKSLLAVPISFVSEHIE TLEEIDVEYKELALESGIKHWGRVPALGCEPTFITDLADAVIESLPYVGAMAVSNLEA RQPLVPLGSVEELLAAYDSKRDELPPPVTVWEWGWTKSAETWNGRAAMLAVLALLVLE VTTGEGFLHQWGILPLFH</aaseq>

Gene Sequence

<dnaseqindica>404..510#1558..1873#2234..2377#3508..3609#4013..4116#4198..4324#4464..4616#4916..5016#5193..5394#5900..6124#gggaccaaccgttgcggatcatcctcccctgccgcgcgtgggtgttgtcttcttcccctccactccacaacccgcgcccctcgcctccgccgcctcgccggaatcgaagccgcctcctcccctctcccgctctcaccggacggcaccgatccgttccctgctcctgtctccaccgttctactcgcctcgaaaggtacttttgatatccaccacacccccctccctcccacgccgcgcgccctgtggtgttgagatgtatgtggtggagcggatgagatcgatcctggtttcttttttgttgcgagctgatccgtcgactgcagcggatgccgggttattctcgcggagacggaaatggttgctgagatgttggttttttttacggttgcagggaggggggaggatgtggtcgtcgagccaggcgagcacgaggggcgtgattgaggtggggagggtggaggcggggccttcccatttccccaagaggcccgcgccgcggaattcctccaggttatttttttgttcccccgtcgctggaggattaattttgggcttgtttatagtaccgctagctcagatttatttttagataatggatttttcattaatccagcctctatattcacgaaggatacacacagccaaaccactagctcagatgaggtccatctagctcttcttcctcttctactcagatgagggatggttgatgatttatgactaatgctttaaactaaatcgtatttcttcagctcacaaagctataggcttgtgagttgtacgatgttaaaccatgaaacgctactagactgccttgattttgatgttgaattggcacgcttgtaccgcggtgacacgacggcgcacgtgccacctgaaacgctactagattgccttgatttgtttcttcctacgacttcggccctccattcgtcttgtgcatgtaattgcttgttttccaattattgtgtataaggtgttggtacttatatagactaatggaattcatttgtgtccatgggtacatgggtgcgtgtttcacctcatgccgggttaagtgtttgtttcgttagtttcttaacacttacccctgaaacaaagttgctgtcttgctggtagcccttaatccagctatacaaacaaaaactctcacgtacttgtgggtctacagtaaccagttgcaacttaagctctgcattaatggtagtggaactgagggctagtgctggttatttttttatgttctacataagatggtcagttgttcatgtttgcactattacaagggctatgcatacctgcatctatttgcacgcggtgttactcactagtctcctgcgctattgatagaatggtgctagtctcctacagtattcatagatcgtatgggtcctacatgtcttaatttttttcttacaagaaagcatttattggatgatctacaactctgtatatacaatttctccttgatctgtcacctcgtgtgctactttttgttacttacgagtgccataattagtgtcattcttacacagttactttccctttttccctcagggtcaatctgtcaaggacatatgcaattaaatcttgttcagtgagtagccgtacagggctttgccttggacaatgttatcataagaagtcttctgcttgcaaatgcaagttgggatggtcttctcaaccactgtctagcttgaggcatcacttaagagtacattcatcagcatcggaggcggttcttacttcccaatctgatttcacaaaacttcttgttgggaatgaaaaaattggtgttctcttgctgaatcttggaggtccagagacccttgatgatgtgcagcctttcttgtttaatctatttgctgatccggtaattgccactctgaactgcaattgtagtgctctaaggtttttcaattgctctattttttattatttattttgcagatttacaaattatggtgccaaaacaattaatggtgagaaatttgttattcccttcttgaaatgtgcaatagggtactcttccgatctgctgattttatttgaatttgaaggtctcagttgtgaaagtaaaatcttcttaggagcttgcgtaggtttctaacagcatgctatagagaagtggaacgctttgatgttcagatgtattacttgattgtagattaagacaataatatggcaacctgtttttcttatttactggatatctcatgatgcatggtggcaggacattatccgtcttcctagattgtttcgctttcttcagaagccattagcacaatttatatctgttgtaagagcaccaaagagcaaggaaggctatgcatccatcggtggtggttctcctcttcgtcaaattactgatgcacaggtatgatgtgatattttattgtgtgaatggccatggctgctgtacattgaatatcttagtaatgtggatacttgcgatcataacattaactaaagactatcaagtgctcacgagaagacaaccttggttgacccaaacagtccatgtcttgttagatgattctaaagttctttgtgatttttttagataattggagtaaatatggtacaaatgttccccatattttatgatagggattgtttgcttcatctcaccctgttgtttcgtgggtatgcatcactattttatttatttggaaattgtgaattttccaatctagttgttgatgctttagaattttccacttctaattttggcatctatggttgccacttttcatcaaaatattcaagttttctgttcttgaagtactttactatctttatttttttctgaactgggtgagtaatgcccattttgaccaaaatttacatagggttttcctctgtttgatgtgctcactggctgattcaatccatgaagcatcacaagtatgaattcacaaacatgctcattagtcaactgacatctctccttatacacaacattaacatcatctgtagaaatggcagcaataggctattgcaatggccctttgtgctcctttcctttcctccactgcattacctgcaatcccactgcctattacgaactctaatggccagcaattggcatggttccctccaagagcactgttgacatctgcttcccctctgcaccggcacatgtgaacaacaagcacctggcatgtgcttgaatacttgatgcctctagggattgttgtcaatgttgcgatgagcctataaatttatgtaggcagttttggtggtagaatggacttgataggaagagaggaagaaggggtggtgaacggaacctttcacaggcgaaatttggaaaaataaatataaaagccagaatactcaaatagttgcagcaaaatccattgatttcagtgtgcagagtgacagattagtgaaaccagagtgaagtggaaatgtttccctttcccgttcattcttcttattatgttagaatcttatgcatattatgtgctttcacttcgtgtttttatggtaacttatttataggctgaagcactgaggaaagcattatgtgataaagatattcctgccaaggtgtatgttggaatgcgttactggcatccattcactgaggaagctatagaacaagtatgcttgccgtaccttgaacacatttgttttcttctgttattttctccttttagctgatttttggtgtttgactatttcagctactgcatgcatacctataacaaattcctgttcatgtaacataaagcagcaattccagttcccttatctgaagatcaaccagatcttttgcgaatagaactttatcctcttaggatttgaaatggaacatgaatctttgtgtgattttgaatcttctaagatacaaaaagaaagctatggcaattagcaaccgtcacatccatgaacctccatgcattatcaatgctattatagataaaatgaatgagctaccttctggcactgaatgttcaacttatttctatgcaaaacatatttatttaatctaattgtattctagataaaacgggatggcatcacaaaacttgttgtacttcctctgtacccccagttctccatatcaactagtggttcaagtctccgtttactggagggcatattcaggtacctagaataatttgaataataactatagctattgctgttacattgcataactaatgccatctttaatttctgctttagagaggatgagtatctggtgaatatgcagcatacagttataccttcctggtatcagagggagggatatatcaaggctatggcaactttgattgagaaggaactgcgaacattttcagaaccccaaaaggtaatatccctggtgcatgcgcatgatttgctgacttgatttgaagaaaagggtaataaaaggttgttaaactttgagtacatttttgtaaagctgacctaataatataaatatatctaatgagacatccaatttgcaggttatgatatttttcagtgcccatggagttcctctggcatatgtagaagaagctggtgatccatacaaagcagagatggaagagtgtgtggatcttatcatggaggaactcgaaaaaagaggaataacaaactcatgcacacttgcctatcaggttgatacaacacctgctgcctccctccctcccatctgacctacaacttcttgattacagaaactattcttggtcagaatctggtggttttatccaccacttatatttcaatatctatttcatttcaaccattctcatagaaggattcaaatttgaagtagaaaactgctttcttcaccaaaaaaatagaaaggggtggtatttaaatccgagatatgaatccctgattacaaatttatcatcacacctgtggttgcttttcttctaaagtagtcaaaattgttttaattgctcaacagagccgagtggggccagttgaatggctgaggccctacactgatgagacaattatcgagttggggcagaaaggggtgaagagccttctagctgttcccatcaggtattactttgataaacttgatttctgctgtcttgattaaaacaatattctgatgtgttaatgcctctaagtcctagtgacatccattttgttcagcatcttgctttgactgttctcttgtcaatatcattttagctggatagttctcatttgtttccatggtcttcttcctccagttttgtcagtgaacatattgaaactttggaagaaatcgatgtagaatacaaggagttggctttagaatccggcatcaagcactggggacgagttcctgcattaggttgtgaacccacgttcataacagatcttgccgatgctgttattgaaagcttgccttatgttggtgctatggcagtttcaaaccttgaagctcgacaggtaacaactactacagtagaagaaaaaataccttatacacatgatagatcgtcatataataacttttagatgcttcatgtgtatgtatttcataccttatatggtgatagcatttcgtacaacgaatgttagtttgggttaggatacctcaagaggttattgaaattcaattgaatttcctatcctgttctgtcactgaatgagtttgtgtacctgtgcaaattggagctcgtttctaaagatgtaaatagcttcatgtatcaacacaaggctacaaacttagatccctagtattataatctgatttgttaaacaaagttgaccacagtcatttaaggctttacttcttggtgcacgtagcactgatttatcaaacataaccggaacacttgttgtagcatccagatgattatagtgcagcatgcaaatgttcgatcaagaagcagaattaggcaacttgccgttaagaatttacactgatgtgtggcgcattgcctttttgcagccactggtgccacttgggagtgtggaagaactgctagcggcgtacgactcgaaacgcgacgagctgccccctccagtgactgtatgggagtggggctggacgaagagcgcggagacctggaatggacgggctgctatgctggccgtgctggctctcctagtgctggaggtgacaaccggagaagggttcttgcaccagtggggcatcctgcctttgttccactgagccgatggccctcttcaggtcagctctttttgaggtgatctaatcataattttgattcatatggataatttcccgatgctgtatacgaatggaaaaagaaagaatattaactgaatttgactacgcaccacattacccatgttgtacatatgaaatattctacggactcttagtacgaagattaacaaattgaacactggcaaaacgcctggtttcccaaggcagagacatgatatttgtgtttggccatctgggtttaagagatgggattttgctgttgattgcgtggtgggggctgcggcagggttaatcttatcatgaaggctttaatcttatcatgcaaaagaagacggaaaggaagacaacaacagaagcaccgcgaagttaggctgtgaaccactctgcatgcacgattacctgtatcgcaacaatttcacctcctgtgatagtaaagggatttctcggctgggcagtgggcactc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0361200, RefSeq:Os05g0361200