Os05g0361900

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Revision as of 10:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0361900| Description = Mitochondrial substrate carrier family protein| Version = NM_001061847.1 GI:115463424 GeneID:4338540| Length = 3861 ...")
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Gene Name

Os05g0361900

Description

Mitochondrial substrate carrier family protein

Version

NM_001061847.1 GI:115463424 GeneID:4338540

Length

3861 bp

Definition

Oryza sativa Japonica Group Os05g0361900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:17283568..17287428

Sequence Coding Region

17283875..17284000,17284082..17284162,17284267..17284328,17284449..17284500,17284859..17284948
,17285140..17285235,17285323..17285376,17285640..17285730,17286061..17286137
,17286835..17286917,17287122..17287176

Expression

GEO Profiles:Os05g0361900

Genome Context

<gbrowseImage1> name=NC_008398:17283568..17287428 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:17283568..17287428 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggtggggggtgaagaagagaagcccttcaacttcctccagattctgtgtgagggcgtcatagctggtggcaccgcgggtgtggtggtggaaacagctctgtacccgattgatacgataaaaaccaggcttcaggctgctcggggaggaagtcaaattcaatggaaaggattgtattctggattagctggaaatattgctggtgttctcccggcttctgctgtatttgtgggaatatacgaaccgacaaaaagaaaactactggagacttttcctgaaaatttgagtgctgttgcccattttactgccggggctattggaggaattgcggcttctctcattcgcgtccccacagaggttgtcaaacaaagaatgcaaacaggtcaattcaggtctgcacctgatgctgttcgtctcattgttggtaaagaaggattcagaggtctttacgctggatatggatcatttttacttcgagatctgccttttgatgccattcaattctgtatatatgagcaacttcgaattggttacaaagttgtggccaagagggagctgaatgatccagagaatgcacttattggtgcttttgctggtgccattactggggctataacaacaccactcgatgtgatgaagacgcggttgatggttcagggatcagcgaaccagtactccggaattgtaagctgcgcccagacaatcctgagggaggaaggacctggggcattcttgaaggggatcgagccgcgggtgctgtggattggcatcggcgggtccatcttcttcggcgtgctggagaagaccaagtcgatgctcgccgagaggaggagccgcgagccaccagccgggaaggatgagtga</cdnaseq>

Protein Sequence

<aaseq>MAVGGEEEKPFNFLQILCEGVIAGGTAGVVVETALYPIDTIKTR LQAARGGSQIQWKGLYSGLAGNIAGVLPASAVFVGIYEPTKRKLLETFPENLSAVAHF TAGAIGGIAASLIRVPTEVVKQRMQTGQFRSAPDAVRLIVGKEGFRGLYAGYGSFLLR DLPFDAIQFCIYEQLRIGYKVVAKRELNDPENALIGAFAGAITGAITTPLDVMKTRLM VQGSANQYSGIVSCAQTILREEGPGAFLKGIEPRVLWIGIGGSIFFGVLEKTKSMLAE RRSREPPAGKDE</aaseq>

Gene Sequence

<dnaseqindica>3429..3554#3267..3347#3101..3162#2929..2980#2481..2570#2194..2289#2053..2106#1699..1789#1292..1368#512..594#253..307#attatctacttcctctacctcccctaatccactccactccaccgcagcttctcccgcggcgaggcggctcatcccatctccacagccgcaggtgggaacttgccaacggggattctctccgaccgattcaccgggatttctcccgcggtcgccgctccacccatgttttttttttttttgggttcttgcttgtccgtccctgacgaatgttgcaatggtgtttcttggctgcagttgttgcagcaaggaggcatggcggtggggggtgaagaagagaagcccttcaacttcctccagattctgtgtggtgcgtcaactcctcccctcgtttgcttcatcctcctcctcctctgcccatggatggtacagagcacagagttattagatagatagccacatttttcttcttgttcttgttctctctgtctctctgaattttgtgtgaaattactccgtttcattggtcccgcgatgcaatgcgaattcgattatttccccgtgtcttctgcagagggcgtcatagctggtggcaccgcgggtgtggtggtggaaacagctctgtacccgattgatacgataaaaaccaggcttcaggtgatccaattttcgcatcatgctgtattgcaagtatccacttttgatcatcatatataaagcatttactcgtgacgatgctatttatagactgtggaaaaatttgttagttaatttacattgaaataggccccagagttcattcccaagaagggatcttatttatactgaaattacctggagtaaccagataatttaagcaaatgtctagcaatgacaaccttttcttatctttctcttcaattggtccaacaaggacttagattcaagcgagtagtaattacatgaatcatgtgaggcatgtcatgttttggcatgattgtaagaaccctatagtcctctaggctctaacctatgccaggtaactagagaaaatttaaggaagtatttgcagtattttggtattaaaaaagatgcttatacagagaggattgattcagaacttgtgctcaaatggaaaaatgtgaggagggtggatcaactaagagcattcgctgtgtttatgcataaatgtcgggtttcatgtggatgtggtcctgaagcaaccccaaattctaatatatttctagcaaatgcatgtctcaattataatttatattatcttgtgcttccagtttcttgtgtgaatatggtatgcttgctattaaatttgaatagcaacctgtacatgttgtctgaagtttgtgatcttccataggctgctcggggaggaagtcaaattcaatggaaaggattgtattctggattagctggaaatattgctggtgttctcccgtaagtacaaaatacaaagcattcagtttcttttcttttcctcctggcatcgtgatataacatgttattatcagtaaatatgttcatcattttgcatcatttatgttacaacctaacatagacaagatactgaatatgattctggggtctgatgctatgattgcttttactttccttccaaattgatattgttaaattaagtactgttgtttatctttggctagaccctttctcaggtaataatccttagcttcactttttcaggctccataacatgggaatcattgcattctctttccatcatattgtttcttctctatttgcttgtagggcttctgctgtatttgtgggaatatacgaaccgacaaaaagaaaactactggagacttttcctgaaaatttgagtgctgttgcccattttgtaagttaacatgcatttaacatgtttttgcactagttgattgcacgtagaatgttgatcaggctgtacatcgtgctgtttattttgtataatctgtttttttttgcggggaatattttgtataatctgttaagtctctagaacttctaattcgtcagttacagcattgaagtatcaaccatgctgtttgatgtcgttttaatgcttaatcttcagagcatgttgctttctatcactgccttttctaaatgagaatgctacagactgccggggctattggaggaattgcggcttctctcattcgcgtccccacagaggtcagtttttctattctgaactctttcacatttttcttgatgaatttaatgttgttttacactgaaaattgattgcattcctttcaggttgtcaaacaaagaatgcaaacaggtcaattcaggtctgcacctgatgctgttcgtctcattgttggtaaagaaggattcagaggtctttacgctgtatgtatcttctgacctcatatatggtggaacctgtatttagccgattcaactctaatttttgttatccctgtatatttcaggaaaaataattatttgaatctgtttaatatgcctttttaattgaattgttgttacaatggaaaaaaactcattgccttccttgtcatactgtttctttttgtttgtagggatatggatcatttttacttcgagatctgccttttgatgccattcaattctgtatatatgagcaacttcgaattggttacaaagttgtggtacccatcttagcctctgtcttgatgagaaccatattttacttctggttagcaatccttactaggcctcagacgacctcaatataaatgtaggattgaggattcacaccttcatacatgttgtctatggacgagtcttgtatcttgttaagtactaattgtgggcatcagcatcacgctgctttgccaatcatttttgtgctatttgcatcaaatactataacttgattagctgcccaaagtgagatactactattaattgataatccttgtgacattttctgactccaccatgaactgtaactgtaatttcaagaaatttatggatttactaccaccttttcacttgtctgttcaggccaagagggagctgaatgatccagagaatgcacttattggtgcttttgctggtaggactaaattctgtttcttcctcactttctaatccttgttggacaatttttctgttcttatgttgccgtccttcttttgtttacctgcttctataacccatcatttctttctgctaggtgccattactggggctataacaacaccactcgatgtgatgaagacgcggttgatggttcaggtggatccttttgtatcaaaatccatccacagaataacacatcattcctttcaacccctgttggtatcgctgaccccatatatttctttggaccgcaatcgcagggatcagcgaaccagtactccggaattgtaagctgcgcccagacaatcctgagggaggaaggacctggggcattcttgaaggtagcaaaatttttcctttcgcctgctgatggtggtgggtgcactggggttgtgattgaacttggtggctggtgatggcaggggatcgagccgcgggtgctgtggattggcatcggcgggtccatcttcttcggcgtgctggagaagaccaagtcgatgctcgccgagaggaggagccgcgagccaccagccgggaaggatgagtgacagattttaccctcggccatggatggatgcttcaagttttgtgtttgttttgatcgatttcacatgagaagtagtgcatctctcgaggaggaagacaatgccactttgcgtcccaatgattaaattcccattcgtttaatgaattaatattatgttcaagttttttttaaaatctgattatactacattatagcttctctctctccctgcagtttacccatgctgtatgacttgtagatgtaacagtcggtcgttgccgatcaaattgtacctttgtcaatccagatagtattgcagcagtatttac</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0361900, RefSeq:Os05g0361900