Os05g0362100

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Revision as of 10:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0362100| Description = Similar to Protein MFP-b| Version = NM_001061848.1 GI:115463426 GeneID:4338541| Length = 7103 bp| Definition = Oryz...")
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Gene Name

Os05g0362100

Description

Similar to Protein MFP-b

Version

NM_001061848.1 GI:115463426 GeneID:4338541

Length

7103 bp

Definition

Oryza sativa Japonica Group Os05g0362100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:17296051..17303153

Sequence Coding Region

17296177..17296270,17296746..17296817,17296897..17296953,17297036..17297089,17297173..17297240
,17297347..17297428,17298151..17298206,17298323..17298625,17298723..17298809
,17299183..17299357,17299435..17299556,17300093..17300256,17300347..17300410

Expression

GEO Profiles:Os05g0362100

Genome Context

<gbrowseImage1> name=NC_008398:17296051..17303153 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:17296051..17303153 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagaggctccacctccgtggaggtccgccgcgacggcgtcgccgtcatcaccgtctccaacccccccgtgaacgcgctctccctcgacgtgatagccagcttgcagagagattatggggaagctctgaggaggagtgatgtcaaggcaattgttctcactggcgccaaagggaggttttctggaggctttgatataaacgcattcgacaagaagccaaaaaatgagaagcctggatatctgtctattgattttttaacggacatagtagaagatgctccgaaaccatcagtggctgctatagatggcgttgctctaggtggcggcttagagcttgtaatggtttgtcacgctcgtgtttctacatcttcggctcaattaggattacctgaacttcaactgggcatcattcctgggttgggaggaacacaacgactgccccgccttgttggcctgccaaaagctcttgagatgttgttgatgtctaaacctctaaaaggagtggaggcacataaatttggtttagttgacgctgtagtttcagctgatgaattgatcagcacggcctgttcctgggctctggaaattgttgaagacaaacgcccatggttcaggagtctccatagaaccgatagacttccagctcttgaggaaacgaagaaaattctgaattttgcaagagttcaggcccaaaagcagtctgctagtctccaacatcccttagtttgcattgatgtcattgaggagggcataatttctggccctcgagctggcctaatgaaggaaacactttgtggaaaaatgcttgagatgtctcagataagcaaaagcttaaggcatgtcttttttgcacaacgtgcaacttcaaagattccaaatatcagcatattggggttgacaccacggagaatacacaaggtggctattgttgggggaggtctaatgggatctggaatagcaactgcattgatatcgaacaacctcctggtaatcctgaaagaagtcaatgagcagttcttagatgctggtattagcagagttaaagctaatctgcagagcttagtcaaaagggggcaaatgaccaaagaagattatgaaaataaactttctttactatctggtgttcttgactatgaacaatttagagaagctgatgtggtcattgaggcagttattgaggatttatcactaaagcagaaaatatttgctgaccttgaaaaatactgccactctaattgcatacttgccacgaatacttcaacaatagaccttcatttaattggccaaaagacatcttgccaggatcgaattgctggtgcacacttcttcagcccatgcaatgccactgttggaaataatccgtactcatcggacttcctcacaagttgtcattga</cdnaseq>

Protein Sequence

<aaseq>MARGSTSVEVRRDGVAVITVSNPPVNALSLDVIASLQRDYGEAL RRSDVKAIVLTGAKGRFSGGFDINAFDKKPKNEKPGYLSIDFLTDIVEDAPKPSVAAI DGVALGGGLELVMVCHARVSTSSAQLGLPELQLGIIPGLGGTQRLPRLVGLPKALEML LMSKPLKGVEAHKFGLVDAVVSADELISTACSWALEIVEDKRPWFRSLHRTDRLPALE ETKKILNFARVQAQKQSASLQHPLVCIDVIEEGIISGPRAGLMKETLCGKMLEMSQIS KSLRHVFFAQRATSKIPNISILGLTPRRIHKVAIVGGGLMGSGIATALISNNLLVILK EVNEQFLDAGISRVKANLQSLVKRGQMTKEDYENKLSLLSGVLDYEQFREADVVIEAV IEDLSLKQKIFADLEKYCHSNCILATNTSTIDLHLIGQKTSCQDRIAGAHFFSPCNAT VGNNPYSSDFLTSCH</aaseq>

Gene Sequence

<dnaseqindica>127..220#696..767#847..903#986..1039#1123..1190#1297..1378#2101..2156#2273..2575#2673..2759#3133..3307#3385..3506#4043..4206#4297..4360#gtattctcagagagagagagagagagagatctcgcggccgggcgagtgtgagccacgtcatcgtcgccggcggcgaggggggctccccgcattgccttctccggccggcgagcgagcgagcgagcgatggcgagaggctccacctccgtggaggtccgccgcgacggcgtcgccgtcatcaccgtctccaacccccccgtgaacgcgctctccctcgacggtatcatatccgtacaacccctcctctcctcctttccatgctcggattccgcccattgcggggctggttagcagccatgtttgcctgcgtggttctctgtgttgtcgcaatcttgccaaattttgctgaactttctttttgtgtgtgtgtgtgtgtgtgtgtgttttggaagaacaggttgtgaaatctgagatgatttgtgtgctttgggatattttgagggtctatgttagagttgatatgccagatttggttgttactccatgtctccatgttccatgctccgagccatgccttatatatacacgaattatttgttattgccaagttgtcaacatgtgttgtgttactatatgcagtcaatttttgttggccttgtttgatcagttctcgctgtcgccaagtaatttgtgctgtttaatcaagtaactatttttgttactaattataggacctatggtttctacttttgcagtgatagccagcttgcagagagattatggggaagctctgaggaggagtgatgtcaaggcaattgttctcactggtacttacttgcacatgagcttcttgtcaaggatcttatgctagcgatgtgtgtttctaatgcctcatatgatgtgaaggcgccaaagggaggttttctggaggctttgatataaacgcattcgacaagaagccaagtaaagattgtccagtgctctcagtatgttcctgcctttttcaccacccccacttccattgctaaatttttcttttcaccagaaaatgagaagcctggatatctgtctattgattttttaacggacatagtagaaggtaacataacctgagatttcttctttaaaccaagtttgtcaacaagctgaatatttatgtcgttaagttcatgttgctgccagatgctccgaaaccatcagtggctgctatagatggcgttgctctaggtggcggcttagagcttgtaatggtatgtgtagattgcaatggtcgaattgtatgcttcaaccttttgggattcttcttttacttccaatatgtggctatttttgcaacattggcattttcttgtgcaggtttgtcacgctcgtgtttctacatcttcggctcaattaggattacctgaacttcaactgggcatcattcctgggttgggaggtatgctcaagtcccaacctggtcttttgggtcatcccttttttttttaaaaaaaaaaagagactctgatcctatatgtttaactactgcgctttgttggtttggttggcttaactctaatcatgggacatctgtccttgcagccattactaataagatatgaaatcagaaaagactgttgaaaaagaggaagataaattatgaactttaagatgtacagagggcgaatacatcagaaaatgagcaagaaaaaatatctgtatttttcttttccaaactaactatttagtgaaaggcataatcattctaaaggaaacgaaagaacattttacatggtttccaaaaaaaaggggtctacaagggcctgtttggcatggctcccactcccagattcttgtagaagacagagtttgttgcttaaaataagtgattaatctaaaagtttgaacaagatgtctcacactaacaaccctaatctagccccaactccaactccaaaattttttggagctatatatattcaactccagaaacaattggggttggagcttgtaccaaacagtgcctaattctttattaaaaaaacaaggcatacacaaatttcctgttctatggtaacaaaattagatatgacgagagaaagcctcatggatgtttattcctctgccaaaagaatttttttatctttttccagttgattgaaggatctttactttctacaggaacacaacgactgccccgccttgttggcctgccaaaagctcttgagatgttgttggtatggctgtttatacattgcattgtagtgcatcgacaatttctttttccatcttttcttctatggtggtcatggtcatgcaagaaagttaactatggattgtcttctcttattagatgtctaaacctctaaaaggagtggaggcacataaatttggtttagttgacgctgtagtttcagctgatgaattgatcagcacggcctgttcctgggctctggaaattgttgaagacaaacgcccatggttcaggagtctccatagaaccgatagacttccagctcttgaggaaacgaagaaaattctgaattttgcaagagttcaggcccaaaagcagtctgctagtctccaacatcccttagtttgcattgatgtcattgaggagggcataatttctggccctcgagctggcctaatgaaggtacatcaccacttagtgctaacttttcgagcaattgttacatacctagtctaagttgttcttaattctgtttaatgttcatttttggtaatgacaggaaacactttgtggaaaaatgcttgagatgtctcagataagcaaaagcttaaggcatgtcttttttgcacaacgtgcaacttcaaaggttgttagagtcccatttgctgaagtttatgtggtgttcattcttaatacttctttcatcctgcctcataatcagaagttagcaatagattcttatgaacatctgtgaaatgataaaagagaatcatacctatatgccttttaatccaattcgtttaagatcaaaacagaacaaggtgcagtacaattatctatttaattgtatacgatgaattagcatctgaatgactaaatgcaaaaatgtcgtgttgcactgtgatttccatgattactctcaagtaaagatccttttgggtagaattttcaggtatagaattataaatagtacttatgtcaaatgcattcgtttatctgagcgtcttatgctctaacagattccaaatatcagcatattggggttgacaccacggagaatacacaaggtggctattgttgggggaggtctaatgggatctggaatagcaactgcattgatatcgaacaacctcctggtaatcctgaaagaagtcaatgagcagttcttagatgctggtattagcagagttaaaggtgatctttttttgtttctccaacttttattgtttgtcttttaagtttttcattaattcttctgttttcctgttcagctaatctgcagagcttagtcaaaagggggcaaatgaccaaagaagattatgaaaataaactttctttactatctggtgttcttgactatgaacaatttagagaagctgatgtggtcattgaggtagatccaatattttcaagtatttcttttcgctaactttattcagtagaaaatagctctacttgagtgcttattctgttattcatcatgcttgccagaacttttgtgctatttataacatagttatgaaatttaactggactagatcacttaagatgttggttacagcatcagaatgtccgcttaagattttttttttcctctgaaagaaaagaagaacaattttgcctacctgcaggacacaagcacaatgatttaatagcaaatttataagaaataaaaaataccagatcacttccacttaagaatatttttatgattttttccatagcttcaggataaggagaatgatttaataacaacttgataaaatgatgacatattattgacacgatgaatgttttcgttcttagtgattgtagaaatcaattcatcagtctttgagtcaagtagttaacttgaactttttaagtctattgtaactgaaggagaaagcactgatcttaatcgctgcttgatgataaaaactcttgcaggcagttattgaggatttatcactaaagcagaaaatatttgctgaccttgaaaaatactgccactctaattgcatacttgccacgaatacttcaacaatagaccttcatttaattggccaaaagacatcttgccaggatcgaattgctggtgcacacttcttcaggtaatgtgttatgcctcttttcttgtattcctgttttttttctgaactactgtttataacttgtcttttgatgtatattctccagtccagcccatgcaatgccactgttggaaataatccgtactcatcggacttcctcacaagttgtcattgacttgctaaacgtggcaaaacagatacgaaaaacaccaatagttgttgggaactgcacaggttttgctgtgaatcggatgttctttcctttcacacaggtggcttattttcttgttgattatggtctggatgtctaccacatagaccatgtgattacaaagtttggaatgccaatgggacctttccggtaaggatgccagttttactgaatgatcctattcctctacggacttcttttttttaacaagatattcctttatagacttgagcacttaggcgatggctattagtcttgttaagcacttcggatgcaaatttatttttatttccttttatagtaatttatgaattgtctgaattatgttccttgtaataaaagtatgaggtacagctttcctgcatcggaaagattctcagatgttatgagagcaaatgaaaattgtctatgactatataaagaaaggtgtttcagcattaaccttacttggtttgttgctactgtttccactcagtactctgtcatgtgcagccatttacttttatctgcaactgccaacaagtcaatttctccataaacctgttatgagccattttgtgcagtttagatagagtagataggatttggttgctgaacttttcatgccttaattaaaaacttggaccagtccattcctcctatcatacttaaccttcagttatgtctaattttttttggcttccgttccagtaaaactatggtacaatacgattttttgaatggcaacagattcatgtcttttcttcttcctcttttagctacctattacattttccatgtaaccactgtttctgatgttacctgtttctttccgtttctactatagtaatgttgttctgatgttatctatttctgatttagtacaacagatatagcatacccatgtttattactggtccttttggtagatatcttcacactttcttcatgtttgtttctgtactctagtagatatctatttcttcattgtttattgaaggggcctttgtggtgcatgttttctggaccatgagttctctgttgtcttgtccgtacagattagctgatcttgttggttttggagttgctattgcctccagaaagcaatatctccaaagttatcctgagcgatgttacaagtcaatgcttattcaaattatgcttgaggaaaacaggacaggtttttcatattaacaatacattcacctacaatttcttcatgctgttgaatatgattttgagctacatgtgaagctgaatctcatggctgatatactttctggagtgcttggcaggtgaatcttcacgcaaaggattttatctttatgatgataagcgaaaggcttctccagatcctgaaatgaacaagtacattgagaaatcaagaagcatggctagtattgtacaagatcctaaggtactctcgtacttcctctatcccaaaaaaagcgtaacctagtactagggtgtgacacttagtactaggttgggtttggaaccaaattattctccttttctttatgctggacacttagtactggcccgtactgccatgcatcacatctcacagctgtactttggtttgcatatttagatgtcgtacttctcagagtaaacttctccgggtgtcttttttttgttcttttgttacagtagtgagctttgtagcaaggtgctgaaaaccgtatgaaattaacctgatttcaaaaaaaaatgataaatttgaagtacaatactagttcagcacaggtactgtaactagcaagtgaattgcaaggtatctgcagtgctgtagatcatagtttgaaagaacatggttgtacacatgtatggttactgcatcttttggctgccgttcgatatgcaaaatatgcataccagcaaacctttaatttttcactgcttctacacaaagaaatctgacagtttctttcccgtcagctgccgaaattaacagatgatgaaatcgtggagatgatgctcttccccgtggtgaatgaggcctgtcgactgcttgacgagggggttgctatgaaagcatctgatcttgatgtagcatccattatggggaggggcttcccttcctacaggtccctttctttgtttctcttctgcatcatctctcacattaattctccttccctgccactaattacatgttcataactggtgaatcttccattcaacatgtattttgacaccaggggcggagtgatgttctgggccgattcgtttggcgcgaaatacatttacgacagactgaaggattggtccaagtatcacggagggatctttgaaccctatgaatatttatcaacaagagctcgtcagggtttgtctctggtaagaccttatatagcatattcaatctgctctgatacagcttttgcgtttaccaaacaccactttcctctctaaacctttgggtcgatggcttcgccttacaaatttgtcgatgaaactgctgcaggccgccatggctgatggtgcaatgtcacggctctaggggctcatctcatctgttcatactggtatcctgctgctattgctacgtgactcccatttgaggagatgcagtgatgttatctctcttttttttccttttatttacaactgatagttagcaaaatctgtaattgtgtacgacagtttgaataagtggtaaatctggactacagtttatgaatataggaagtatatatatgaatatattgtagagctcgttagt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0362100, RefSeq:Os05g0362100