Os05g0363200

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Revision as of 10:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0363200| Description = UDP-glucuronic acid decarboxylase| Version = NM_001061853.1 GI:115463436 GeneID:4338546| Length = 3976 bp| Definiti...")
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Gene Name

Os05g0363200

Description

UDP-glucuronic acid decarboxylase

Version

NM_001061853.1 GI:115463436 GeneID:4338546

Length

3976 bp

Definition

Oryza sativa Japonica Group Os05g0363200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:17350459..17354434

Sequence Coding Region

17350692..17351012,17351194..17351268,17351366..17351449,17351548..17351627,17352419..17352565
,17353644..17354280

Expression

GEO Profiles:Os05g0363200

Genome Context

<gbrowseImage1> name=NC_008398:17350459..17354434 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:17350459..17354434 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcggagctgacctaccgcggcggcggcggcgcgacgctggccggcgaggcggaggcggcggtagcggcgggggggtactccccgaagccgtccaagccgctcgcgtggctcccccgcgccgcccggtacgccgccggcgagcaccgcccgctcttcgccctcgccgggatgctcgtcgccgctgccatcttctccctcgccaccccgtactcctcctccacccccgccgccgcggccgccggttcaaccgcggcgaacccgctggcgcggttctcggtggagccggcggtgagccggcggcagcagcagctgccggcgaggcagttcgtgggcgggaaggtgccgctggggctgaagcggaaggggctccgggtgctggtgaccggcggcgccgggttcgtggggagccacctggtggaccggctggtggagcgcggcgacagcgtgatcgtggtggacaacctgttcacggggcggaaggagaacgtggtgcaccacttcggcaacccaaacttcgagatgatccgccacgacgtcgtcgagcccatcctcctcgaggtcgaccagatctaccacctcgcctgccccgcttcccccgttcactacaagtacaaccccgtcaagacaatcaagaccaatgtggttgggactctcaacatgctcggattggcgaagaggatcaatgccaggttcctcctcaccagcaccagtgaggtctacggtgatcccctgcagcatcctcaagtggagacttactggggcaatgtcaaccccattggtgtgaggagttgttacgatgagggcaagcgcacagctgaaactttgaccatggactatcaccgtggtgccaaccttgaggttaggatcgctcgtatcttcaacacatatggccctcgcatgtgcatcgatgatggccgtgttgtcagcaactttgttgctcaggctttgaggaaggagcctttgacggtttacggtgatggcaagcagaccaggagtttccaatatgtctctgatctggttgagggattgatgaggctcatggaaggtgagcacgtagggccattcaacctgggtaaccctggtgagttcaccatgctggagctggccaaggttgtccaggacaccatcgaccctaacgcaaagatcgagttccgtcccaacacccaggacgacccgcacaagcgcaagcctgacatcggccgtgccaaggagctccttgggtgggagccaaagatccctctccacaagggtcttcccctcatggtcaccgacttccgcaagcgcattttcggtgaccaagacagcaccgccacaaccaccggaggccaacaagggtag</cdnaseq>

Protein Sequence

<aaseq>MASELTYRGGGGATLAGEAEAAVAAGGYSPKPSKPLAWLPRAAR YAAGEHRPLFALAGMLVAAAIFSLATPYSSSTPAAAAAGSTAANPLARFSVEPAVSRR QQQLPARQFVGGKVPLGLKRKGLRVLVTGGAGFVGSHLVDRLVERGDSVIVVDNLFTG RKENVVHHFGNPNFEMIRHDVVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVVG TLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAET LTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRS FQYVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNAKIEFRPNTQD DPHKRKPDIGRAKELLGWEPKIPLHKGLPLMVTDFRKRIFGDQDSTATTTGGQQG</aaseq>

Gene Sequence

<dnaseqindica>3423..3743#3167..3241#2986..3069#2808..2887#1870..2016#155..791#ccccgcgcccccttctccctccccacctgcccgcattttgcatccaggtccccggggaaatttttatttgcggggagggccttggggggtttgtggaaattttacatccaggtccctcgccgtcgtcgtgagggaaaaagaaaaagaaaaaaagatggcgtcggagctgacctaccgcggcggcggcggcgcgacgctggccggcgaggcggaggcggcggtagcggcgggggggtactccccgaagccgtccaagccgctcgcgtggctcccccgcgccgcccggtacgccgccggcgagcaccgcccgctcttcgccctcgccgggatgctcgtcgccgctgccatcttctccctcgccaccccgtactcctcctccacccccgccgccgcggccgccggttcaaccgcggcgaacccgctggcgcggttctcggtggagccggcggtgagccggcggcagcagcagctgccggcgaggcagttcgtgggcgggaaggtgccgctggggctgaagcggaaggggctccgggtgctggtgaccggcggcgccgggttcgtggggagccacctggtggaccggctggtggagcgcggcgacagcgtgatcgtggtggacaacctgttcacggggcggaaggagaacgtggtgcaccacttcggcaacccaaacttcgagatgatccgccacgacgtcgtcgagcccatcctcctcgaggtcgaccagatctaccacctcgcctgccccgcttcccccgttcactacaagtacaaccccgtcaagacaatcatatccttttttcttcttcgatcatatgcgtctctgaatttgtttcgtgcttggatcttgatttttttgggtgctcgattttatttttttttttcatgcgttttgttttgttttttttgggggtgggaaatgatttgtgttaggattggatttgatttgttgttttgtgcatgtagtagttggctttgtcagatatcctgcatctgggtgaaaacattgaatctgtcccccccggattcagggttcgtccggggattgggaatctgggggcggggaaggggaatttggatgcatggagctcgggatttgcgccacgttgcgccgtgaatttttggaggtttctgccgtggcctcatcctgaacacagagattcacatgtgtcccgcattccgctgtttaaagcagagtttggctgcttcgggtgcggcatcttgatcaaattcgatcaatctttttttgcgtcgtttcaaatggaagatctcgagtctttgcaccgtcttactcttttagaatttaaaaaaaaacatacatttttttataatgttaagttcaatttagagtccttttgatagaagagcataaaagcggtagtactattgcgattaagaatttttcagaatgagtccttttgatagaagagcatattgtgatcaagcattgaccaatcgagttacgtacagtttactttgcttgatgatctcctaacgggggaagcaagccaaaggaaacgcgcgttctgcttggatctagctgagctgtcgagtgagtgttgcttaaatctgacataaagttgtgggtttgattagccgaaaaagcaaggtccaagtcgcctctgctgtccccttttctttctaaccaactttgcttactgttcacttcacatgatctctttttttgttgcctgcttttgcaactactagtgtagtggagatttagcctaacaaccaaatggaaacatgggagacacatgaaaacggagcctgacctttgttctttcattatcatcgttagtacctgtattgtctttggaaaatggtctatgttgaactgtgtaaagccttaacctttgagatggcacaagaccaatgtggttgggactctcaacatgctcggattggcgaagaggatcaatgccaggttcctcctcaccagcaccagtgaggtctacggtgatcccctgcagcatcctcaagtggagacttactggggcaatgtcaaccccattggtaataaactactctcatactccatcagatcaatttgttatgtttcttgggtctagcatgtttcggtagcttattgttagttgagatcaaagaactatccaagttggaccacgggtattattggagctgtccgatcgtcgcttatagcaaactgttgcctaccatactagtgctgtttctcaccatacatatcctacattcatcaatgccatgttttgcacatcattgagagtacattgattgaacatacactcttagatttggccattagaggttacccaaatttattattcggcaccggtagtataaagtggtagaagaaggaattgcccatctaaaatggacatattcttgaattgaagcatactgttgtatgaaagaggcatggtttaggtaagtggaggaaaccgatattgggatcttgcccgctggagatgctggccacggaatcttagatgggtgggctcttgcatgctttgattctctttggtggaaagggacaaagctggttggtggaatttgctccgagagggccacttggtggttctctttttaataaaggaacaggggaacaacactacgcttgaccaattatgcttaaccaaacacccaccaactgagacatctaaaataatcaaaagaacagagcagaaaaggagggaagtttgttgagccagatagttacagctaacactttgtcccatgtttttttttccctctactactgtttaatttattcttaacatggtaaggtttggttttactgatgcatgtgtttctcggaataacaggtgtgaggagttgttacgatgagggcaagcgcacagctgaaactttgaccatggactatcaccgtggtgccaaccttgaggtataatgcagtctctctctttgcaaaatgactttacgttctgttcgttcatctgaaagtaaatgttaatttctgctgttggttttttctgtgttcaggttaggatcgctcgtatcttcaacacatatggccctcgcatgtgcatcgatgatggccgtgttgtcagcaactttgttgctcaggtataattcactctttaactgtcctaatttttttcagaaggatgcaaatcattgttcagtttaaactgaattggtctatctgcaattatggttacaggctttgaggaaggagcctttgacggtttacggtgatggcaagcagaccaggagtttccaatatgtctctgatctggtgagtttttctctctactgcactaagcatatctgaaatctaataagcacttgggaagacagtaatactaatgacaatgtcaacagaaatagttatgatctgaggtttatcctcctacttgtctagttgtggaatgtcgcacagcactgcatttcttgtactgattttggtctcctcccaggttgagggattgatgaggctcatggaaggtgagcacgtagggccattcaacctgggtaaccctggtgagttcaccatgctggagctggccaaggttgtccaggacaccatcgaccctaacgcaaagatcgagttccgtcccaacacccaggacgacccgcacaagcgcaagcctgacatcggccgtgccaaggagctccttgggtgggagccaaagatccctctccacaagggtcttcccctcatggtcaccgacttccgcaagcgcattttcggtgaccaagacagcaccgccacaaccaccggaggccaacaagggtagaaggaggaggaggcataagactctggaaattttgatggcctgctttctagctgcttggttaagctccttactgacaaaaggcatggcctcatagttagttcctctggagctgtttgttactaaaaataccttggttgatgatgctgctgctgctgcctgtgatgtcattcttttttcttgtaattttttcttcctcctctcagtctctctcatctatacgaaacttcagttgg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0363200, RefSeq:Os05g0363200