Os05g0363500

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Revision as of 10:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0363500| Description = Armadillo-like helical domain containing protein| Version = NM_001061855.2 GI:297604380 GeneID:4338548| Length = 568...")
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Gene Name

Os05g0363500

Description

Armadillo-like helical domain containing protein

Version

NM_001061855.2 GI:297604380 GeneID:4338548

Length

5686 bp

Definition

Oryza sativa Japonica Group Os05g0363500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:17368325..17374010

Sequence Coding Region

17371976..17373199

Expression

GEO Profiles:Os05g0363500

Genome Context

<gbrowseImage1> name=NC_008398:17368325..17374010 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:17368325..17374010 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cttttttttttcttcggtatatttgttagatcaattcagaataagaatctgacatggtgcacttctcctgaaaatgcaatgatttacactcctgaatctccactctaccaagttgatgactgtgatatgaaacaaaacgacctacaatcgagcagatcgcagtgctcagcgaatagtctatcgaattcagtcctaaatataaataaagcagactcatactcaacatccaactatttcaacaaggatggcatgtttccacaatgcacgccaaagcatgatctcagatgcttcagcaacttctcaaccaaatttatgaagagaagtgctctatctgacatagtctcccgaggaagcatgagcaggaaattcaaggctttctcacagagtgatgagtggagcgatgtcagctcacgctgggggaaggaaagccaggtagactttcttgagaggtttgagaaggcggtgtcgaaattactggtttcagatgggctagagagctacctggatgcaggttcggaagttacaaccatatggcacttgctgaatagttcttctgaggtgagatacaaatcatcagcacggcaagacatcctcgaccaacttcttgacagcatttcgacatctaaaaaggataaagtgatcagggcatcagtttatgttctcctgcttatgctatctgaagataggaatgcaatgagaggcatcaagagaaaggagttccatttatccaatctagccagtgcattgaagagagatgtgcatgaggcagccattttgatatacttgttggatccttcacctttacagatcaaaaacttagagttgttaccttcacttctacatgttgcttgtaattcagacaccaaaaagtggcctgcggtgcttccattgaccccgacatcagcatcaatagcactcattgagatcttggtgacagcattcgactatgtaacaaacaacgtccacttgggtgccatcagctctcctcatattctatctaagcttgttgatgttgcaaagaataacaacttggaagaaggtgtggccctggcagctattctcgtcaggtgtgtacggcttaatggaaactgcaagaagttcttgtcacaggctactccagtggaaccgttccttcaccttgtaagacgaaaagaacaccgtgccaagtgtgccgctcttgaatacttccatgagattcttcaaattcctcggtacattccataa</cdnaseq>

Protein Sequence

<aaseq>LFFFFGIFVRSIQNKNLTWCTSPENAMIYTPESPLYQVDDCDMK QNDLQSSRSQCSANSLSNSVLNINKADSYSTSNYFNKDGMFPQCTPKHDLRCFSNFST KFMKRSALSDIVSRGSMSRKFKAFSQSDEWSDVSSRWGKESQVDFLERFEKAVSKLLV SDGLESYLDAGSEVTTIWHLLNSSSEVRYKSSARQDILDQLLDSISTSKKDKVIRASV YVLLLMLSEDRNAMRGIKRKEFHLSNLASALKRDVHEAAILIYLLDPSPLQIKNLELL PSLLHVACNSDTKKWPAVLPLTPTSASIALIEILVTAFDYVTNNVHLGAISSPHILSK LVDVAKNNNLEEGVALAAILVRCVRLNGNCKKFLSQATPVEPFLHLVRRKEHRAKCAA LEYFHEILQIPRYIP</aaseq>

Gene Sequence

<dnaseqindica>812..2035#gtgagctctgtcattccgaaatggccggagttttcagaggtaagttgttatgctttctgtacaagtgtttatatgatgcaatctactattacagaggaattcagacctgcatttgggagctcaagtgaatttgtcatttgcacaggatgggacaatccactcaattgatcaagaagaaaagtgcagagccttcgactccaactgtggcgatcatgatagcttcgctgagctgaaggattttctcaactgtgaggatccagaccttcaagaagataccaaggggagctctgacagcaggtgcctacatgaaatgcttgaggaataccagtcagattcacctgtttccttctactcacaccttgattctagtgaagaaagtgacaacgaggtaatacatgttcaaattctaaaactgttgaaaattttgcaaattgtcataacacaatttggaagtccaaaagttttagttgatccaggactatgtaggaaaatgataatcatacctcttcttttattttcagcaaatttaactgaaaccctcacctaaagtttgtaaatagagactactcagactatgcagtttgcaacaataatgcatgggggataaagcatacctttaatatcaaaattaatgtacgctggaagagcctttgagtttttgacatttaattcatctaacgtaggaggtttcacatgacaaagggaggtcagcaaaggttatgcctattgatacagttttcttgtcaactaaactccatggaaggtactatatccgacaccatctgatctactgtttcccatattgtcctaacttttttttttcttcggtatatttgttagatcaattcagaataagaatctgacatggtgcacttctcctgaaaatgcaatgatttacactcctgaatctccactctaccaagttgatgactgtgatatgaaacaaaacgacctacaatcgagcagatcgcagtgctcagcgaatagtctatcgaattcagtcctaaatataaataaagcagactcatactcaacatccaactatttcaacaaggatggcatgtttccacaatgcacgccaaagcatgatctcagatgcttcagcaacttctcaaccaaatttatgaagagaagtgctctatctgacatagtctcccgaggaagcatgagcaggaaattcaaggctttctcacagagtgatgagtggagcgatgtcagctcacgctgggggaaggaaagccaggtagactttcttgagaggtttgagaaggcggtgtcgaaattactggtttcagatgggctagagagctacctggatgcaggttcggaagttacaaccatatggcacttgctgaatagttcttctgaggtgagatacaaatcatcagcacggcaagacatcctcgaccaacttcttgacagcatttcgacatctaaaaaggataaagtgatcagggcatcagtttatgttctcctgcttatgctatctgaagataggaatgcaatgagaggcatcaagagaaaggagttccatttatccaatctagccagtgcattgaagagagatgtgcatgaggcagccattttgatatacttgttggatccttcacctttacagatcaaaaacttagagttgttaccttcacttctacatgttgcttgtaattcagacaccaaaaagtggcctgcggtgcttccattgaccccgacatcagcatcaatagcactcattgagatcttggtgacagcattcgactatgtaacaaacaacgtccacttgggtgccatcagctctcctcatattctatctaagcttgttgatgttgcaaagaataacaacttggaagaaggtgtggccctggcagctattctcgtcaggtgtgtacggcttaatggaaactgcaagaagttcttgtcacaggctactccagtggaaccgttccttcaccttgtaagacgaaaagaacaccgtgccaagtgtgccgctcttgaatacttccatgagattcttcaaattcctcggtacattccataacttgaaaaggtccattttgttaattccgaatagcttgttgaattgtgtgaaccttcaggtctgcagcgaactccctgctgcaagaaataaagaagctaggaggcattgccattatgcatacattgatggcctgcctccatcaaactgaacctgaacacagggttttagcagctaatcttcttctccaattggatatgctggtatgtctactgtccctggtactcctctgaagaattttcatttagagccctgcaaatacaaccagattgtctgcagctcattaggacaactttaaatatcacctcgaataaaatgaaagcactgattattaaccattcctatgaatacatactagcaacagttcaacaaacacagcattgcagtgatctcacattatcattttagataaaggaatgatctcacattatctaaaaaatgatctgctcctgtaggacaaaccagatggtaaaagtgtattcagggatgaagcaatggaagtcctgttggattccctatcatcccaagaaaactgcaccgttcaggcattagcagcatctttcctttgtaatctaggaggaacttattcctggtcaggggaatcatatactgctgcatggctcgcaaagaaagcaggactcacatcaacatctcacagaaatatgatcagaaatatcgactgggttgatccttgcctgcaggtgaagtatgaaaacactatctaatttggacaagataattatcttaaccgtagttaacactccagagtaaaatatgatgcaggacacagaaataggtccatggagcagtaaatctgcacggacaattatcagaacaggagtaccagttctccgtgctttggccaaaggaatacaaagcaaggcgaagggaacctcgcatgattgccttgtatgtgctgcatggcttggaagcgagctggctgctctcggtgaaaataacatgagatattctgcttgcgagatcttgttacatgacatagccagacacttgcacccagggtttgagcttgatgaaagacttctagcatgcatgtctctctacacttacacctctggaaaaggtaaagagattccattactgccaagttatagccatcgagttcagtggtttggtcgagaactgaccaactaaaaccatgaatattttagaatgtcaagaccaattttacaaacgtgtcacaaaaggataatcaaagaaatatataattctttttacaaaaatgttttttggtacctgcagggaagcagaagttgatgggcttgtcagagggttcacgagaatctctaaggaggctgtcatcattcacatggatggctgaagagttgcttcaagttacagattattatcttcccagcaagccagtgagtattgttcaaatctaactcctttccacttttcttttctcttcctttctgaaccacaaataatgtgaaatcttggccattcatgttctcccttaaacacaatgaacatcttctaaacttagttaagtaatagaaaaaagaaatacaaaagtataccagttcatttaagattataattatcacttgcacagggtccttacttttggaacatcattttacacgaaatctaattatctgaagttgtcagtgcagcgtgtatcatgtgttcatacacagatattggaaatcggtcaacctggcaatggagcagcaaccgctataatattcttcggagggcagctctttgttggttattctagtggcaccatcagggtaatgatacatggcatgtgtatgtgcattagagtttctaatcagtaatcactcgtaaatccacaacataagcacacatattttaacatagcaatagttggttgggcagcaaaatgcaaaaaaaaggggtatttcttcagttcatgaaagatgtacttgcataattacaattcctgattctcaagtgatcctctacaggcatgggatataaaaggccaaagagcagtagtcataagagaggttaaagagcacaagagagcagttacatgttttgcactatcagacactggagaaaatctcttgagcgggtcagctgacaagtcaattagagtaagaaacgggcggaccagttttcaaccacaaagaagtaactgtaataagttaatagctaatgataggctctttgcaggtatggaaaatggcgcaacgcaagctcgaatgtgtagaggtaattcaaataagagaagctgtggagcaatttgaaatttacaatgacaaaatcattgtgcttacaccgaacaacgttcttaaggtatgcaatttgctttaaatgttcttggtgattgccaacatttgaaatgtataaaataacatttataatagaattcatgttacctcggcagttctcttactcatcaagaagcacccagacattttacaagagcaagcatgtcaaatctctagctgtggctcatggcaaagcttatcttggttgcacagacttgagtatacaggttagtactgttggtatgatagcagtagtagcaccatatctaggaacatgctactgtatctgaaacaaaaaaaaatccacaggaattagacgtagcagtggggtcaaaaatcgagataagagcacctacaagaagctggcgaattaggaaacaacccattagttccattgtagtatataaagattggatgtactgtgctggtactcaagtggaaggatccaccataaaggtaaggatcaaacttgaacctgtgaaaaaaatcagattacaaggatttgagaaaaaaaagttataaatatcggtaaaacaggactggaagaagcgatgcaaacctacaatgacgatggcgatatcaaagggaacaaatgtagaggcaatggcagtggtggaggacttcatctacctgaactgcgacaaaagccctagtatcattcaggtcatctaaatttattttgaaattttggttgtccctattaaaggcaccacctttgccttgaggttacatagttggaaaattacagaagccagccaacctgacaatgcttctgcttctgtatttttgacagatatggttgagagagaatcagcagaaagtagggaggctatctgcagggaacaagatcacgagcatgttcaccgcaaatgacattattttctgcgggactgaaaccggattaatcaaggtcagaaccacgccatcaatcttggccacagccatttatttgtatccaccaccattagcaccataattaaaatctccttgttgcaaatatgtacaggcatggatccctttctgaagggacatacaggagcaaagaccaaaaaaaggctcaattatgtaaatggttaaatgcaacaacatgagagtatgtatgtacagaagagaaaaaaatagcaggtaaaaagaaaaagaaaggcataccattgtacaaggtgatcgatccctctggaggacaaaccagcgtgcataaactccgtgatcaccgatttctacagagcaatgagtagcattagtagcagcagcagaggcttcacaatgtaaatatagatatagattttgtgtgtgtttttttcctttttctacttggattttggaaaagatagcgattgtgtatgctaatactacctgatactgcctccttcatagcaactgcccatctgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0363500, RefSeq:Os05g0363500