Os06g0642900

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Annotated Information

Function

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Expression

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Evolution

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Structured Information

Gene Name

Os06g0642900

Description

Ubiquitin system component Cue domain containing protein

Version

NM_001064709.1 GI:115469149 GeneID:4341635

Length

3470 bp

Definition

Oryza sativa Japonica Group Os06g0642900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:27060545..27064014

Sequence Coding Region

27060972..27061058,27061156..27061329,27061472..27061698,27062428..27062584,27063632..27063814

Expression

GEO Profiles:Os06g0642900

Genome Context

<gbrowseImage1> name=NC_008399:27060545..27064014 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:27060545..27064014 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctgcggtagtctgtggcaagaggtcctccgccatcttcgccgacgacctcctcccgccgtcccctccctctcctcactcccaccaccatccggccaagaggtcctgccgctcccctcaccgccgccgggaggcccacctccaccacctctcctccttgttcccgggcatggatccccagttgctcgaaggagctcttgatgcttctggagatgatttggattcagcaataaagagtttaaacaatctgcgcttggagtctacagaggctatcttatcagctactggttgcaaatctgaaaatgggctccccacagcagtttatccgtctgttgaaggtattgttaataatggtggtgtgagtacagctaatgaacacccagctgctgcagatagttgccagacaggtaataatggttctgaatgggttgagctatttgtcagagagatgacaaatgcatctgacatgggcgatgcgcgtgctcgcgcctcaagagctttagaagttttggagaagtcaatcgtggagcgtacaggagctgatgcagcacaaaacttgcaaaaggaaaatatgatgcttaaggagcaattgaccgtcgtgctgcgagagaacgctgtcctcaagcgagcggtcgccattcaacatgagcgccaaaaggagttcgacgagaggagccaggaggttcagagtttgaagcaacttgttgtgcagtaccaggagcaactgaggaccctagagataaacaactatgcgctgacgatgcatctgaagcaggctcagcagaacaactccatccccgggcacttcaatcctgacgtcttctaa</cdnaseq>

Protein Sequence

<aaseq>MSAVVCGKRSSAIFADDLLPPSPPSPHSHHHPAKRSCRSPHRRR EAHLHHLSSLFPGMDPQLLEGALDASGDDLDSAIKSLNNLRLESTEAILSATGCKSEN GLPTAVYPSVEGIVNNGGVSTANEHPAAADSCQTGNNGSEWVELFVREMTNASDMGDA RARASRALEVLEKSIVERTGADAAQNLQKENMMLKEQLTVVLRENAVLKRAVAIQHER QKEFDERSQEVQSLKQLVVQYQEQLRTLEINNYALTMHLKQAQQNNSIPGHFNPDVF</aaseq>

Gene Sequence

<dnaseqindica>2957..3043#2686..2859#2317..2543#1431..1587#201..383#ctccgcgatccgcctccgcctcgagcccaaacccacccaccaacccaacccaatcccatcgagaggaggggacgcggcggcggcggcggatcggcggcgggggaaggaaggggatgggcggcggaggcggggagtaggacggcgtcggcggcgagcggcagcgcgaggaggacgaggaggaggaggaggcgaggggcaccatgtctgcggtagtctgtggcaagaggtcctccgccatcttcgccgacgacctcctcccgccgtcccctccctctcctcactcccaccaccatccggccaagaggtcctgccgctcccctcaccgccgccgggaggcccacctccaccacctctcctccttgttcccgggcatggatccccaggtccgtccttttcttttctcctcttgtcgaattttgaaggaggatgtggtagatggatactggtatcattttttgaggcggaaactgagcagtttgttattgggatcccgtgtttgggggaggtgaggtgaggtgggtgcgtgcatgttgaggtgtggcgacgatgattcatgggtaaattttcctggtctgcgtgtgatcaccggtgactaatttgggcgggctaagatgaggaaaaaaaatgcgtgttctttatggcttagatttgtgatcccatttggtcttcacgggttgttttgtgggggtcgaacttgttgttctggtgtatggattgctgcaagctggatccttttcatcagaaagtgggcattttcacttcctttgtggaggtgtaaggacgaagggcatgccaatcagaattagggctcttgtggcgttttggttggatgatcttgtgacgcttgtgctgccctgcggtctggggaggaaaaaggagcgaacttggaggctttgggagatgctttttgcattggtgttttctttgatagcattgaatctactgctttcctgtatgtgtttgtttaccaccctttacctatggatttagtgttcagatccttttagataaggaaaacataccagttccacctataggtatcatcaaatcaattgatggcacaatttatacatgcttatcatttccagtactggatgatgggcaccactatgccgatgactatgagtacaccttagagattacatctctacatgtaatgtttcttggagttttgcaaagctacactctctcattcgagaaagttgtggtttcctgcctgcagagactaggcaaggttgatgagcactgaacagctgtgtttatattcttctacactatatcaaatgattgttgcatgggcaaattcatgcgtgtatcctttgttagttctgcgtaatgtttatcctttgtagtaatgccaggtatttgtgcacagtattatctctatgccatataactaactgatcatggtttctgaaaattcattttagttgctcgaaggagctcttgatgcttctggagatgatttggattcagcaataaagagtttaaacaatctgcgcttggagtctacagaggctatcttatcagctactggttgcaaatctgaaaatgggctccccacagcagtttatccgtctgttgaaggttcagcttttaaccaaaagctttttatttctaggatctgtgcatataattctcatgcactagtacttcttgcttttgtcacacttaaattttagacaccgcagtaccaatctatcataatgatccatgtgggtcatgatatactctttcaaattgtctatcaatattattcagagatctctagccttgctggtttctttgatgtctgttcttatgtttatattctgcaacagtttctttgatgtctgtcttatgtttatattctgcaacgtaatgcgctgttcaattaaagacactgcacacgattcagtcaattatgttatatggagtgtgcatgattaactagacataaattctgatgactgcatccacatatcttctatcttccattcttttgtattcaccatatttagaatagttgtgtattccttctcagtgtgtccccaagctgtcaagttctcgcgttgcattttctggctatatactacccaagttctttgtattttttctaccaaaatactgccaggctttgtccagcaatgttaaactatattattaaaagaataaaatatttacagaacgattacaaggaaagagaaaggaaaacccaagccaattctaaactatcgtttcctctcacaacacatgaatcggttgcatctcactcccttgtgcaaatgtagcatactgtatatatgacaacagcaactattttgcatatcttggcaggtattgttaataatggtggtgtgagtacagctaatgaacacccagctgctgcagatagttgccagacaggtaataatggttctgaatgggttgagctatttgtcagagagatgacaaatgcatctgacatgggcgatgcgcgtgctcgcgcctcaagagctttagaagttttggagaagtcaatcgtggagcgtacaggagctgatgcagcacaaaacttgcaaaaggtacacgtgtgtctatcttctctagggtgtaaaaaacatcgtagtgtttggtcagcaattcggcatgtagaaaacatgcatcaatgcatgatttaggagtaacaataacattgaatactttcatatttttctttctgtacaggaaaatatgatgcttaaggagcaattgaccgtcgtgctgcgagagaacgctgtcctcaagcgagcggtcgccattcaacatgagcgccaaaaggagttcgacgagaggagccaggaggttcagagtttgaagcaacttgttgtgcagtaccaggagcaactgaggaccctagaggtggcaaccacaatcctatctccttttgcaagtttctttctttttctgcctaacatacatactgatgaagaatctactggggtaaaaaatgctgcagataaacaactatgcgctgacgatgcatctgaagcaggctcagcagaacaactccatccccgggcacttcaatcctgacgtcttctaacttttgccgcaagacggtctgtccagaataataatctctgaagatgtcatgtgttgttggtgggaaatgaataataatctctgaagatgtcatgtgttgtgttgttggtgggaaattgcctactgcctctgcgataggagatcaaaattgtcgtgttattacaccgttgaatttaccatcaaacttgtttagactaaatcaccaggggggagagcttccccacctgaattttgtcattgcatagaggatgaaaagttcattacaacatatttagagtttgtagtggggaggagaaaatttctttccaaacggagactacatgtcggtcttcaatcttaagattctctgcccagagagctgcctcgcggatgcaacgttgcaggcaggatccaatcgagggggtttatttcttgaaaatgacatcatg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0642900, RefSeq:Os06g0642900