Os06g0647200

From RiceWiki
Revision as of 20:26, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0647200

Description

CheY-like domain containing protein

Version

NM_001064739.2 GI:297606270 GeneID:4341665

Length

6284 bp

Definition

Oryza sativa Japonica Group Os06g0647200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:27326681..27332964

Sequence Coding Region

27326681..27326707,27327746..27327887,27327989..27328141,27329584..27329934,27330030..27330106
,27330320..27331442,27332603..27332664,27332908..27332964

Expression

GEO Profiles:Os06g0647200

Genome Context

<gbrowseImage1> name=NC_008399:27326681..27332964 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:27326681..27332964 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggttttcaactatagcacacatggagggatccaagggacgaacatggcggcgacgcaggcgacggccgccagaaaattcccagagggtttgcgcgtgcttgccgtcgacgatagccccgtttgcctcatgctcctggaggcgttgcttcgccggtgcaagtaccaaccgacgatgacgagggacgcggcgacagcgctacggatgctccgggagaggccgggggatttcgacctggtgattagcgacgtgcacatgctggacatggacggcttcaagcttctcgagctcatcggccttgagatggatctccccgtcatcatgcaatccgcaaatggggagcttgaaactatgatgaagggcgtgacccatggggcatgtgactacttggtgaaaccagtgagcctcaaagacatccagaacatatggcaacatgtgtggaggaagagaaagcttgacataaggaaccacaatggcggttacaacgacggcggtgagctggttggcgcgacgcggaccaagaggaagtacacaaggaagatgagaaatgatggagataattatggtgagaacaaagagaacatggattcaactctgaagagacaaagggttgtctggacacctgagctgcaccgggactttgtcattgccgtccatgagcttggagttgatcgtgctgttccaaggaagatattgcggatgatgaaagtggactacatgaccagagagaatattgcaagtcatcttcagaagtatcggttatacctgaaaaggatcagcactcaaacaggcatggatcctgatcaatttcctgaaaaatggaagtatatgaatgaactggatgctctgaaaaattactgtgaaaatgggagataccgtctaaccccagccattgcctcctcaagctcgagcaatccatttgcaaggatgaattctgcatctgcattggcaacaaatggctttctgcccactcactcagttcagctcaagaacagccagagaaacatggccatggggacagttggccatggtggaagcccgggcaacaatcctgtgtttcagccactgcagaactcatcaaatgcaagaaagtgcttcccatctggcccatctgggagctcatttgcaaacatatcaaatggcttggtgttggatacagacgattctggtagctcatatgctggcatgttctgtaagagtatgtgggagacaagcaatggctctccatcttgccattctggcaactcgtctgcaaacaagtcaaataatggggtttcggcgcctgcaaatcagtttcaagtacagtcaaagtttgggttttcagctcttgcaaatcagtttccagtgcagtcaaattgtgggttttcggcgcctgcaaatcagtatcaagtgcagtcaaatggtgggttttcggtgcctgcaaaccagtttccagtgcagtcaaatggtgagtttttggcgccaacaaatcagtttccagtgcagtaccctgaagtgaataatcagcctttggttcagatgaatcaatcttctacaaaccacttcagcacaattggcaatgattaccaatttccggaccttgcaaactgtagcaaatactggcaacctacagcaccatcgatgtttcctgatcttggtcacaatgatgggacatctttccgcccgtcgcaggcgaacatcgccaatatcaaccagctctcaagctttgcagcctccagtggccaggaaccgatgtttggagatgaactacatggtcaaatgtcaccaatcatgagcaccatatcactgtcagatttcgatgatcagatggggtcattcaacataggaaacgacacaagcccagcagagatgatgcatgacaacttctcacttggaacaaatggtccagaagggacagacaccttggatgacattgttgctgagctgtttaatgatgatttcatggaaggttatgatgctgtcgtagatggagaccaggattttgttccttag</cdnaseq>

Protein Sequence

<aaseq>MVFNYSTHGGIQGTNMAATQATAARKFPEGLRVLAVDDSPVCLM LLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVHMLDMDGFKLLELIGLEM DLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQHVWRKRKLDIRNHNGG YNDGGELVGATRTKRKYTRKMRNDGDNYGENKENMDSTLKRQRVVWTPELHRDFVIAV HELGVDRAVPRKILRMMKVDYMTRENIASHLQKYRLYLKRISTQTGMDPDQFPEKWKY MNELDALKNYCENGRYRLTPAIASSSSSNPFARMNSASALATNGFLPTHSVQLKNSQR NMAMGTVGHGGSPGNNPVFQPLQNSSNARKCFPSGPSGSSFANISNGLVLDTDDSGSS YAGMFCKSMWETSNGSPSCHSGNSSANKSNNGVSAPANQFQVQSKFGFSALANQFPVQ SNCGFSAPANQYQVQSNGGFSVPANQFPVQSNGEFLAPTNQFPVQYPEVNNQPLVQMN QSSTNHFSTIGNDYQFPDLANCSKYWQPTAPSMFPDLGHNDGTSFRPSQANIANINQL SSFAASSGQEPMFGDELHGQMSPIMSTISLSDFDDQMGSFNIGNDTSPAEMMHDNFSL GTNGPEGTDTLDDIVAELFNDDFMEGYDAVVDGDQDFVP</aaseq>

Gene Sequence

<dnaseqindica>1..27#1066..1207#1309..1461#2904..3254#3350..3426#3640..4762#5923..5984#6228..6284#atggttttcaactatagcacacatggagtaagagcatttaactatttaccattatttggcaatcatatctaaataacgacaaactattgaaagtcaaagaaagtgacatgttattgggaccgacagaaagtaattttgcttaaacccaaaattcaccaaagagaaacataaaaccacactagtaaaatgtatataaaaaaattaaacccaagggaagagacgttctaaatacattgctttaagataaaaaaaaaatccctaaaagccggttagatgcaccctatcaccttagctacatgccacgaccacggaaaacacatagcgatggaccttttttttttgcgtgagccagtagtgattgagccctcgtcagcggcctcactcgttgggatcttaccatcgtgctatgaacaacatatataattcaacaaatacaataaatgatttttatattatacacctagcttcatcatttatgaaaaccagcaaaaccagatgtggttttcaactgtagcccatagaaaaagggcatttaaacatttaccaatattcggtgcacacacatttactcctcgcatcaaggctctcgcaaaagtgggaagaacagtccaatagaacatcaaccagtgaagtgttagtggcagcggaagaagaaacatgcatgcaacaatagtcaggaatttaaagctagggatttgcacgcacacaggccaaaataccttccaaatttctctgcgagggagcgcgtgaattccacccccatctactgtcctgatcctctcctctcctcgtcgatataaatgacgccctccccctcgctgttgcacccatccctctctgacctcgagttgcagcttcttgtgctgttttgagccagcattcgagggaacccatcggaaaagatctgaaaggtgggggttctaggagggtttcttggtgttcttgtattggttttggtgggttcttgctgggggtgcggagggggagggagattttggtggtcagtcgttcgtccagattggggttttcttgttgctgatcgtgtttgtttttttttttaccaaggggatccaagggacgaacatggcggcgacgcaggcgacggccgccagaaaattcccagagggtttgcgcgtgcttgccgtcgacgatagccccgtttgcctcatgctcctggaggcgttgcttcgccggtgcaagtaccaacgtgagttcttggcttgttagccgagttgtttagttagatcttttttttgtatatatttttttcttgttgtttgcttgatttctgcggtggccgggatgtagcgacgatgacgagggacgcggcgacagcgctacggatgctccgggagaggccgggggatttcgacctggtgattagcgacgtgcacatgctggacatggacggcttcaagcttctcgagctcatcggccttgagatggatctccccgtcatcagtaaaaccccttccttcacaccaactttccatttttcatgcatgtcatggcttccctttcttggtatttgtcccttttctcttggaagtagatgtctaaagaagtaggaagtgttgctttcaagtagatctgttgaatggttgtttgttatacattggataccacgtgagatcctgtatatttattgacttcacactcatacttgggctgatagatggtactaggttggagaaaagtggtcacatgtctattatgtgcttggtcttcacattcatcaataataatctgaacatgtaacggaatttcagtggggatattatgtcgttgttttatgatccgttatagttgttgttttgttggcgttactacttccaagtagataagtagataaatcaaatggtttgtcgtacattgaatagtacttgatattctgtaaaattattgacttcattcatacttgggttggtagatagtaggttagagaaaaatggccatttgtctattatgtgcttggtctttagattcatcaacaataatccaaacatatgtatagcggaatttcggtggatggaatattatgttgtcgttttatggtccattgtacttgttcttttgtaggcgttactatttgcaagtagatatattgaatggttcgttgtacattggatagcacgtgagatcatataaacttattaacttcacccatacttgggctgatagatggtaggttagagaaaaatggccacgtgtatattatgtgcttgggttttagattcatcaataataatccgaacatgtaacggaatttcggtggatggaatattctactgttgttttagggtctgtagtagttattcttttgttggtggtactactttcaagtagataaattgaatagtttgttgtacttagatagcacgtgagatcctataaatttattgacttaattcatacttgggatgatagatggtaggttagacaaaaatggtcacatgtctattatgtgcttgatctttagattaatctgaacatataacagaatttcagtgaatggaatattcccttgtcgttttatggtttgatatagttgttcttttgttggtgttattgtcgaatctgcattcgtgtaatcgtgttacatgtattgtcctattttttctatttaatgtgcaaaatagtaaaacctatatcatttgaaaccgtcgaacataaaagtgaccataactgtagcatgtcattgtctagcacgtgtgaaatatttgcttacaataaaagatgggaaaaacatgtgtaataccttaaatatattcaaaagaacagagtccatatataactagcatcatctacgccacattttttttcctgatccggatccacaggcaacagttcatgatgcccagtttattgaaacaaattctgattgctgactatacgctgtgcagtgcaatccgcaaatggggagcttgaaactatgatgaagggcgtgacccatggggcatgtgactacttggtgaaaccagtgagcctcaaagacatccagaacatatggcaacatgtgtggaggaagagaaagcttgacataaggaaccacaatggcggttacaacgacggcggtgagctggttggcgcgacgcggaccaagaggaagtacacaaggaagatgagaaatgatggagataattatggtgagaacaaagagaacatggattcaactctgaagagacaaagggttgtctggacacctgagctgcaccgggactttgtcattgccgtccatgagcttggagttgatcgtaagagctcatgcatcatgtctcagttatcaaacaatctttttctttttttcaatttgtcttaagcaataaatattttgattatgtgaatgtaggtgctgttccaaggaagatattgcggatgatgaaagtggactacatgaccagagagaatattgcaagtcatcttcaggtttatatctacacttatgtttaatttctatgtttctataattaaagatatttggattactcttttctgatcgaaagtgttccatacataaacctttcatatcttcttttaatgtgtgcacacaactagtaatcaatttttttgtgatttttttattgttttccaatgagtatggacacatctcaaccatgtgtttgcctttcttggtttcagaagtatcggttatacctgaaaaggatcagcactcaaacaggcatggatcctgatcaatttcctgaaaaatggaagtatatgaatgaactggatgctctgaaaaattactgtgaaaatgggagataccgtctaaccccagccattgcctcctcaagctcgagcaatccatttgcaaggatgaattctgcatctgcattggcaacaaatggctttctgcccactcactcagttcagctcaagaacagccagagaaacatggccatggggacagttggccatggtggaagcccgggcaacaatcctgtgtttcagccactgcagaactcatcaaatgcaagaaagtgcttcccatctggcccatctgggagctcatttgcaaacatatcaaatggcttggtgttggatacagacgattctggtagctcatatgctggcatgttctgtaagagtatgtgggagacaagcaatggctctccatcttgccattctggcaactcgtctgcaaacaagtcaaataatggggtttcggcgcctgcaaatcagtttcaagtacagtcaaagtttgggttttcagctcttgcaaatcagtttccagtgcagtcaaattgtgggttttcggcgcctgcaaatcagtatcaagtgcagtcaaatggtgggttttcggtgcctgcaaaccagtttccagtgcagtcaaatggtgagtttttggcgccaacaaatcagtttccagtgcagtaccctgaagtgaataatcagcctttggttcagatgaatcaatcttctacaaaccacttcagcacaattggcaatgattaccaatttccggaccttgcaaactgtagcaaatactggcaacctacagcaccatcgatgtttcctgatcttggtcacaatgatgggacatctttccgcccgtcgcaggcgaacatcgccaatatcaaccagctctcaagctttgcagcctccagtggccaggaaccgatgtttggagatgaactacatggtcaaatgtcaccaatcatgagcaccatatcactgtcagatttcgatgatcagatggggtcattcaacataggaaacgacacaagcccagcagagatgatgcatgacaacttctcacttggtagtgactcgaacatcagttcttcaacaccaactgattcaagcttcggttctacatttcctgactttcatctcgacagccctgagatgccggctcagatgctgaatggtggggatgaagatggcattcttctccctgtgctcgatgacacagttgatcagcaagatctttttgatcaactagatgaaaacaatggtagggaaaaacttggtagtggccgatgtgttaggaagggtccctttgaatgtttcttttagaagagcaattgtagggaaaaacttggaagattggcttgaaattgtttcaaaggtggtgagtgtcaatttgaatgataagcaagaccaattcttttgcaagagcaataaaaaagggttgttttatgttaactccatgtataaagcccttatgcttaatggtgtaatacataggaaatctttaatttggaagctaaggattcctttaaaaattaaaattttcctttggtatattgaaaagggggtgattctaacaaaagataatcttgttaaaagaagatggaagggtagcttgctttgtagcttttgtaactctaatgagtcaattcaacatctcttctttgattgcataatggctagatacatttggaatgcgatctatcttacttttggagtcaagcaaccccgtaatagttcacacttgtttggaaattggttaagaggttttgaacctaagcttaaaagacaaacttgggtaggcatagcggcgagttgttgggctttgtggctcagtagaaatgacttagtctttaatggctacaaccacgtatcttttttgtaggtaattttcaaagcaactcagttgtcaaggctttggtctttgcttcttaaagaagacgaaggcattgaagtaatcgcgaagtgcaagcttttagagaagcgtatgatggagctcttctctacttttgggtggaactttagaagaaggattgaagcttagcttttagttcctcttgcttgttatccatctttaaaacttatttatgctttacccatgtaacgggagagtcttatgtactcgtgtttgtgacttttaggctgtgtacaccctcacaaggtgtagaggccgggttttttataatccattatctaaaaaaaaagatgaaaacaatggtttcatcacaggaacaaatggtccagaagggacagacaccttggatgacattgttgctgagctgtttaatgatgtaagatactctcctttttcctgcagatcggcagctcgttttattcttcttttctctctggtttcgatttttcttcacatacctgtagccagtattcactacactgcttgattcataccgttggttcatgcttataatattgaaacattgggcatctttgaagtatatttcgtttcggcttgcactttacacttggaattcgctgagaagtgcatctgaatggaacttattttctcactgcaggatttcatggaaggttatgatgctgtcgtagatggagaccaggattttgttccttag</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0647200, RefSeq:Os06g0647200