Os05g0365700

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Revision as of 10:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0365700| Description = Glycoside hydrolase, family 1 protein| Version = NM_001187459.1 GI:297724048 GeneID:9270758| Length = 5075 bp| Defi...")
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Gene Name

Os05g0365700

Description

Glycoside hydrolase, family 1 protein

Version

NM_001187459.1 GI:297724048 GeneID:9270758

Length

5075 bp

Definition

Oryza sativa Japonica Group Os05g0365700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:17554159..17559233

Sequence Coding Region

17554685..17554834,17555040..17555147

Expression

GEO Profiles:Os05g0365700

Genome Context

<gbrowseImage1> name=NC_008398:17554159..17559233 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:17554159..17559233 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaggcgtcctctgcatctgcatctcctcctcttcttctcggcatggctactgctgctgctgctgcaaggtgtaagctcgctacagttcaggcgagaggacttccccgatggcttcgcgttcggagccgggactgcggcttaccagtatgagggcgcagctgctgaggatgggaggacaccgagcatctgggacacctacacacattcaggtctctctctctatatctctcaatttgtgttggaacttggataa</cdnaseq>

Protein Sequence

<aaseq>MERRPLHLHLLLFFSAWLLLLLLQGVSSLQFRREDFPDGFAFGA GTAAYQYEGAAAEDGRTPSIWDTYTHSGLSLYISQFVLELG</aaseq>

Gene Sequence

<dnaseqindica>527..676#882..989#gggctggaaacgtgtgcccccttcgataattagcatctcttcgttgcaacctcagattcaagaaatttggataaatcactttgctcccattttagatgaaatttaggtcatctccaactctccatatcatctagcgtcaaataaatctaatataaaaagctttaaatcaaacgtgaatctgagatcggatgctgtgccaaataatgccgtagttttctccctgcggctccgagtttccgactgcgggcaaagccaggaaccgatcagctgagctcctaaaatttcttgaaaaagaccatctatacctgtgtgaagacgtcccaagtcccaacctaacacatctgagagtaaaacaaaattgtgtctttttctattgcccgattcgatctgcctgccaagtgatgatcgtcccgttgacccaaattttcgttctcctcaccgagtatagtacttaccctgatcgatcttggagatttagaagaggaagacgacgacgaccaagaacaactagaagtcaaagaacgcaatggagaggcgtcctctgcatctgcatctcctcctcttcttctcggcatggctactgctgctgctgctgcaaggtgtaagctcgctacagttcaggcgagaggacttccccgatggcttcgcgttcggagccgggactgcggcttaccaggtaatacgtgtatgactgtatgtacaggagagatgattctgaatttctctgaatttcctgccctgattctgaatttcaatggagcgtcttgctcttgctactagccacctgttgtttgcttcctgactgattcagagaacgtacgagcgaggacagggtttgacatgcgtttctgaatacttggttttggttttggattttgcagtatgagggcgcagctgctgaggatgggaggacaccgagcatctgggacacctacacacattcaggtctctctctctatatctctcaatttgtgttggaacttggataattttcagcacactgataatgctgcgttgctatgctagttttatttctccatcgtataatcagggttagtaatctcgatattatgatttttggcgggggtggctgaaagaagcgaaatctccgaaatttcggtactttttttgccgaaattttttaatactttgatgaattttgaatgaatttgaataaaatttgaccaaattcacaaaagattagaaaaaactaaaaatctcgggcgagatatgtgcttgccggtgggggccgaaatttcggaaatttccaaaattgcaatcacttagattgcagttcacgggattcggtgcagagaggggcaaacactttgactacaatgtgaaatccatttctttagggatgcaagtggacaagcacaaaaacatgcttgcttgttcatttcttacataatagtataaattttagaagaaaaaatgaataagaagtgagataagggggcaaaaaaaatcccgcttgcctactccgtttgcatccctacatttcttttctggatagctcaactacgttttgtttttttacagagatgtacatgataaattatgacaagttatgttatgctacgcataagaatgcagaaaatgtgttttttttataaaaaaaaatcatggtttgttttttatttatccatgttaagttacttccattattaaaaaagaaagaatatgaatttgacatgtaatctgctgcatcagggaggcatccagaagatggaacaggtgacgtagcttctgatggctatcataagtacaaggtatttttggattagagataacaagaacaaatgtcagtttgatcggctattttttttaatgctatgagaattttcatttcagttttgacctcagttcattgtggggcttttgtaggaagatgtcaaactaatgactgagattggcctagaggcttatcggttcacaatttcttggtcaagacttatccctagtatgagaattacatcattatcaatctcccattcataataccggatcattagtgacaatgtcatcttcacagttcacacataattctttgttagcttccccacccaagttttgattttctattttctttttggacaaaggtgggagaggagcggttaatccaaaagggttgcagttttacaacaatatgataaatgaactagtgaaagcaggtaactgtactttcccaattctgaaagaaaaggtgcattctttaataatcagctattaacaaaatttcaggagagatgatcttaacaaaaatgatgactagcacctctgagattagcccttttttttctcccaattcatgaaggtattcagatacaagttgccctatatcatagtgacctccctcagagccttcaagacgagtatggtgggtggattaaccccaaaattgtgtaagcactaagcagtaatttcctttcatgccattctgataagattaccaagaatgacaagaatcatcagaaatttttatcctcgcatgctttaccttcctttgcatatgtgtttcagtgatgacttcacagcatatgctgatgtgtgcttccgagagttcggcgacagagttgcgcattggacaactgtacttgagccaaatgtcatggctcaaggttgctatgacactggaattcttcctcctaaccattgctcatatccatttggcaacaattgtacaggtggaaattccacggttgagccatacttgtttatacaccataacctgctagctcatgcttcagctgttagactttacagggagaagtaccaagtgagtgtgcattaccatttgaaagttttgtcctctttcttgtttttatggagccaagaaaatgaattttgttgctatgttttttttccactgttttaggttgcacagaagggcattatcggcataaacatgtactccttgtggttctacccactcacagattcagctgaagatattggtgccactgaaagagcaaaacagttcatgtatggctggtatgtcatgttgtattgtatttctcattgcgtcacagtagaaagaataaaaaaaaaacctctatactctgcaaaaggaaaaatagcaagaaaaataaaagatttgacaaattaatttcgttggtgggttgttgccaggtccgaccttatttctggggtatatagtatcaaggtgtttctgtcatttgaaataatttagagctgagaggatatccaatgcaattatcttttgtggtgcactcatgcaatgtttttttggtttggcaccaaataagcatcatttaagaaaaaaactatatttaatcagtttaccagcaacctacaaactatatgtactcctcccttatctaaaaaagtttactttagctgtaaaatttcaagttaattctttgtttacagcaaaacgatgttatgttaagactaaaaagatgatagaatccgacgaatgtaaagtaaaatagggaaaagaaaaaagacaatgctactctccatattcattttcttctagtttttttgaatgaaattacatccagattttgggttgcaagtttgtaactgaccattgcagacaaccactgttactttatccttgattttcttttcaaaacagcgtgaatcctcatcgttgacactgaatcttgacatgacaaaatctgaccaaacttgcaggatcttgcatcctttggtgtttggagattacccagagaccattaagaaggttgtcggttcccgccttccgttcttctctaaccatgaatctgagctggttactaacgctttcgacttcattggattaaatcactatagctcagtttacacgagcaataataataacgtagtaaaggcacctttacaagacttgactgccgacattgctactttgttcagaggttcaaaattcgtacagatttgcttttattgtgtttttttttaaaaaaaagtttatgaagtttatttattttatgtatgcatgttttttatggcagccaccaagaatgacacacctactccagaggtgatcaccgatagtattgtctctgctgaaaactactaaacttatggtaacatccatagactgtaaaaatggttttgcttgttgctcagtttctaccaggaaacactgtagatcctcaagggctggagaatgcacttgaatatattcgagaaaactatggaaatttgacgatttatattcaggaaaatggtcagtagtccttcaataatctgtatggcataatctcaattgtcaaatttaatgtccagaaatattacttctatctctaattctgtcattaatttcacctggcattgcatcaggcagtggagcaccagacggaaccctggatgatgtggagaggatcaactatttgcaaaaatacatagcagccacactgaaagccatcaggtgcttaagaattatgttccactgattctactctatctctagtagaatatttccatcaactcttttttggtgcaaatctgaaactataatcacaagatgccactcatagatcttactagtgaacgactaactgattgatcgtcgcaggaatggtgcgaatgtgaagggatactccatgtggtcattcatagatatttacgagatatttggtgggtataacagttggcattatggacttgttgctgtcgatttcggcagcacagaacggagaaggcagccgagacgctctgctagctggtactcagacttcttgaagaacaatgctcccatcagggtggaggatggctcctttgtctctgcagcctctcatgctcaactctgaatgatgtcaatctgttgagaatatgggtaccaggcacctgcacggcctgcatatcttactaagtcggatccatgtattatgtaatagagtaggactctatcacaatgttaccttgtgttctatggtagggcctagagtctcagttgaatataaccatataatatgttgctgtaaatatgtgatgttcctagggtctatttgtaaaatgttcagagaattagaaggaggaagggggtgtgtaggggaacataccctgagaaaaatccccaaatcaaacagtatggtatcagagcc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0365700, RefSeq:Os05g0365700