Os05g0366300

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Revision as of 10:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0366300| Description = Conserved hypothetical protein| Version = NM_001061865.1 GI:115463460 GeneID:4338559| Length = 6794 bp| Definition ...")
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Gene Name

Os05g0366300

Description

Conserved hypothetical protein

Version

NM_001061865.1 GI:115463460 GeneID:4338559

Length

6794 bp

Definition

Oryza sativa Japonica Group Os05g0366300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:17588074..17594867

Sequence Coding Region

17590993..17591291,17592045..17592352,17592432..17592479,17593587..17593984,17594363..17594698

Expression

GEO Profiles:Os05g0366300

Genome Context

<gbrowseImage1> name=NC_008398:17588074..17594867 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:17588074..17594867 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagttggtgccagctctataatggaggatgccaacggagtagtcgatttggatgttgacattgttggcctagaaagtggtgctgcttgcagcaaatttgtcaaaactgaagatcctgatgctacagagtgttcaagttcttttggggacactctgtcagggtcagaagatgatgcaaggccttcagagattagtgacattgaggtcgactcaccattctgccgctatcctgctaatggtgatgctgctgctctcatggatgcagctgtttccgacaatttggatagattattaaagaagaaacgggtaactgatcactggcgaaagtatatcagcccattaatgtggagatgccaatggttggagctacgtatgaaggatttgcaatctcaagtatcgagatatgacagacaacttgcagtactaaaacatgagaaggagttgcagacaaaaatgattgagttggattgctcctcatcgagatcagtacccttctcttctcattgctgcaggaagactatgaagaggaggaggagaaagagaaacgaggagaaaatgaatgcttcatcgtacatctcaaatcacactgtattctcttattatgagaaaacggaagcagatgccttttctattgatgacgatgaggacacagatgaaaacaccacagttaacaatgaaactgattggctacttggaattaagagaggtgaagctactgtcgagcagattcttttgagcattcaatctgctcaagataaagtgcttagcctgagatctagtctcaagaaggcaatggccaaaaagagtaagggagcaatccttaaagtcaacacacacatgaacggtgcacagagctcaagttgctcaccaggaaagggtaaagtgcttgaaagatcaccaagggacatgtcggattgtgatatggatgatgccgccatgcccgagagtgctctttcaagttatggagaagctaatgatatggatatttttgaaagcaccatgagcttattgtcggctgaagttccacatcagatgggagaatttcaccagagttctgaagatgtattgattgacaatcaagcagctgaggaagggtatcagaactttgaggtgatcagccatccatgcaagcgcctaagggtatcggtcaagagagaaagcggggcgcactccgaggatgagagtgttgcccccacagtctctgtgaagaaagaagctcaggaagaagccacaaccagcttcggtctccaggcagcgttttttaagcccggctacacaggcaagcggagaaggaggatgcctaaaattcaaagacgaggcggttcatccgcctctcctttttcgtcttggatttcctctcgtattcgtaaaaagcggcaattctaa</cdnaseq>

Protein Sequence

<aaseq>MEVGASSIMEDANGVVDLDVDIVGLESGAACSKFVKTEDPDATE CSSSFGDTLSGSEDDARPSEISDIEVDSPFCRYPANGDAAALMDAAVSDNLDRLLKKK RVTDHWRKYISPLMWRCQWLELRMKDLQSQVSRYDRQLAVLKHEKELQTKMIELDCSS SRSVPFSSHCCRKTMKRRRRKRNEEKMNASSYISNHTVFSYYEKTEADAFSIDDDEDT DENTTVNNETDWLLGIKRGEATVEQILLSIQSAQDKVLSLRSSLKKAMAKKSKGAILK VNTHMNGAQSSSCSPGKGKVLERSPRDMSDCDMDDAAMPESALSSYGEANDMDIFEST MSLLSAEVPHQMGEFHQSSEDVLIDNQAAEEGYQNFEVISHPCKRLRVSVKRESGAHS EDESVAPTVSVKKEAQEEATTSFGLQAAFFKPGYTGKRRRRMPKIQRRGGSSASPFSS WISSRIRKKRQF</aaseq>

Gene Sequence

<dnaseqindica>2920..3218#3972..4279#4359..4406#5514..5911#6290..6625#gtgtcgccacccacagcctctcccccctctctgacggcgccgccgcacgacacgacaaccaaccgaagccagcctctcccgccgccttcgccgccgccaccgtcgccgccggacaggtacctaccttgcttcctccccaccctcttccttccccaggtctcggccatcgtattggcgcttgcgggcgctcgcgcgggctcgctagctgcatgccgatcaagagcgaggcgagcatgtgtcgatcgttgtttgttttgtgtgtgttcattcctgctctgttctagctagctaggactagagcgcctgctcttgctgcttttggtggcgaagtgaaatcttgcgacggccggcggcgggagatggccgttgccgtttgtaatggtctgtcggccgccgccgccgtcatattgtatggtatggtatgtcggatggaggctatagggcggtgggattgagatttgatcggcggcggtcgagttccgacttccgacttcccccagtagctagtgcttgttcacgatagcggtggagccacctccccgttggttcggccgtgccgccgtctcctctatcgactagagccatcgtttagcttatctgccgaataagcgaaacggtatatttttgcaaacgaaaagtaatttgtcaataaaacttttatatacatacgtgtttttagcaatctaaaagcaaaagccgaaaaataaacttcgatgaaaaaaaatcttaaaatcaacgctaaatttaaggttgaaaattcaaattttagctgataagcataagcataagcgaaaagaagaggccatagaaattagtcgattatcgaaaaatgctactacattaattgttcaggcttgacgaagccgctggctctgccactctcctgtccatggagatgttactagtatccttccggttaattactgggtatatagctagatatactccatatactgggaggttttggcaaagctaagctagctaggttctttatagaaaaataaatggaaatgaaaaagaaaatcagttctttgtattgccgatttggttttggttgcgcgtttcatattccgtgctctttgttgtgccgcagctgcctggttgagattcaattgcaaccttacgaaaaaaaatgcgagatcttttgccagctgcgcgctgatcgatcggcaagcttggatttcttggctgccccgtgcgacttgcgttgcatccatgagcctgttaatttcatcgttaaatttctctgggcattattcctcccattattccacctgtagctgaagctactagttagtactacccttgtaaaccttgtttggttagactaatagtattaggaactcacctcatatatttcttttcttctcctgaatagcattgctgttacgttcagaagttcagtctgccagccctttctgctcgaaaatccatttttgcccagtactccgtacctttttttttggttcagatagcctctatccaaaaagggaaaaagagaaaagaaaagaaatccatgggcttgtaaggcgcggcccaaataggcccatgtgagaggcccattagggttactcgtattgcgtgcgccaccgcatgcgtctctcttggcttgtttttcttcttttttttttctcctccttttgctgtgctttggctcgtgtttactcttcttctttttctcgcctcccgcgagcttctccctccgctgctcagctgcggcggccgccgccaccgccgccgccgccgccgctagccctcgcgttttgcacagaggccagcattcgcccgcgccgccgctggctctctcccttctcctgctctgcgatatacgacgcagccgcagccgcagccgccgcggggaggagcaggagggaggagtgtgtgtggccgccttcctctcctcgccgccacggcggccgtcgccggagggaagcgtccggtgcctctccaaccaagctggccactgggttagttgcgaggacttggttccaatgttttttcgaattcgatcgctagctcggcgggagatagatgaaccccgcgtagctgctctcgtggatccggttagtgatccgtaggtatctagacggcaatggcgccactgggaactgtggagatgtgcgtagaggctcgagtggtggaatactaagtgctcgtgagtaaatttctgggaggcggtgagcctgtggaagctttgtgtttcgactgcttgctagaagaaatggaggattaagtctggtgtagaatagctccatctgtgatatatatttagagggttgatttatctgaatcttgagccatttgcaatgtggataattcagaggtgtctacatttcagtttgttttttatgctgttgctacttagacctagatggtgtgagttcacttgcatctacttgtagaggctgtttcagttgtaggtgtccataggtccatcattagcgaggtaactttgtgtcacaatgttatttttttttacataagtctcacaatgttattacgggtgtttcttttctaagtgctattttccaatgtacagtgaagtgtgatgtggatgaagatattatatttttttttaatattcctttatactgcatacctgttgtgtgactgttcagttggctttgaataaaattctagttcaaactgtttgattcggattgctatttgaggatgatgctatcagttggccatattcgaattattctaaatattgaactactgtggtgattggttgccaaagttgataacctaggtccttgctgttacatgatgcaaagataaccatggtcgattgatttcatgtccacatatgtagttcaaattttgtctttcccacatgctacattcccatgtatttgaaacattatttatcacaagttttgctgacaatttctcttcttaattgtagcagtataaatggaagttggtgccagctctataatggaggatgccaacggagtagtcgatttggatgttgacattgttggcctagaaagtggtgctgcttgcagcaaatttgtcaaaactgaagatcctgatgctacagagtgttcaagttcttttggggacactctgtcagggtcagaagatgatgcaaggccttcagagattagtgacattgaggtcgactcaccattctgccgctatcctgctaatggtgatgctgctgctctcatggatgcagctgtttccgacaatttggatagattattaaagtaagtagattgagtaactgattacttccagatcttgcttttccgccttcctgtaaatctgaaatccatcccttgggtaatcggttatcacctagcaatagactggaacagaaataaattctggaactgcaaatctgttatgcatgtaatttttccttttgcgggctgctgattaccccttatgctaaaagcgcacaaccatactaacatagagtattactctgttttatctgcaaagtccaatcgtctctgaagactaattcaaggagcaacctggcagcctgtcttctttaggcaccaaatcaattttatttttatattttggttcttgtaatacatgattttaccggaaatttactaacacttaatcatgtaatacaattggcaaaaactctcagatgattgaaatatacatggataatatttaagtcatccaaacaagtgccgaagatgataaaacaacgataatagcaagggcatcactcgaggagtgcttgctcagtcacttgacttatggggacaaaatagatgagaatgagaatgggtgaaaaaagtaggtgcgctatgggtttctcatttagatctggttgctgatttggtgctccaaccagttggcctgggattgcattggttgcacgtgatatattcctgtgcttaatagtataagtcaagcaattgttagtttatgtacagttcataaggaagcatcaagaaggcaaagcacatcttacaacattctgtcatccattacaggaagaaacgggtaactgatcactggcgaaagtatatcagcccattaatgtggagatgccaatggttggagctacgtatgaaggatttgcaatctcaagtatcgagatatgacagacaacttgcagtactaaaacatgagaaggagttgcagacaaaaatgattgagttggattgctcctcatcgagatcagtacccttctcttctcattgctgcaggaagactatgaagaggaggaggagaaagagaaacgaggagaaaatgaatgcttcatcgtacatctcaaatcacactgtattctcttattatggtaaacattgtcttctatttacaaatataaaattacaaactgccattgtgatatcaagcttattgcaatcatgatgcagagaaaacggaagcagatgccttttctattgatgacgatgaggacacaggtaatactgttagttgttttatgatttcaaacaaatatgatatttcacgcatgcataatgaagatggtgttattttggttgttcatggatattcactcccttttgttagaatttgaattctcttttctattgttcttatttattagccgcatcatgcatcagaggtattagaaacaaaattttcactaatagacaagtcaaaagtaatatattttttgcttacaactatgattctgcccttgatataataagtcgatctgtaaaactttttttttgactggaaatactgccaggactgtgcctcgcagtgtgattttataaattgaaaaggttatttacaaattacagaaagaaaacaaaaaaagatcaaagtatcacactgtttgtaaccaatcagaaacaatctgttttagtggatccttcattctgcacaaatgcagaagaacctcagctttgaataaagccctccaagaattgaacgagggaagctcattgcgaaaaattttcccattcctttgcttccaaatatgccaagcagcaatgaagaagacttccaagaaacctctctgattgaactgaatgcgagccaaaaccaccatttgaaaaaattctaggtcaggattccatgtaattcccaaatgctgccagcaaagcttactgaaagggcagaagaaaaaaagatgttctcttgtctctgatattattccggcataattcacaagtgaggtcatcattttcctttgcacaatgtcgcctatccaacatatctcgtgttaagtctgtctctgaataaaagccaagcaaaaaccttaatcttcattacacattttgttttccagatccagacaaaaggcctaggcacatgcacatttgagtatgtgagcttataaaacctcttagctgtgtatttgtcagagttccagatgaaagaccattcatcaccaataccgttctgtaaaacttttgttcttattattgcatgtagagtttggtttaacaagtaattttcatattgccaatcaatgtgctcttattaggagtagaaagattttgtttttgctacacgtttcaaactaattaaaaaaccttgtgttgattgttcagcagatgaaaacaccacagttaacaatgaaactgattggctacttggaattaagagaggtgaagctactgtcgagcagattcttttgagcattcaatctgctcaagataaagtgcttagcctgagatctagtctcaagaaggcaatggccaaaaagagtaagggagcaatccttaaagtcaacacacacatgaacggtgcacagagctcaagttgctcaccaggaaagggtaaagtgcttgaaagatcaccaagggacatgtcggattgtgatatggatgatgccgccatgcccgagagtgctctttcaagttatggagaagctaatgatatggatatttttgaaagcaccatgagcttattgtcggctgaagttccacatcagatgggagaatttcaccaggtaagattgtacacctcatttatctcgcaccatgacaaactttaatcatgaatgctatatcatatttaaaggagcttgagtttcagcttcttccaccttttaaaatataaactcatcgtctcaaaatgtttctgtgtggctcacaattttgtcccaagcatttttgacaggcctaacaaattatgttagatttagaagttgttgatgttcaagttgattgattatgatagtggttgtctacaatttttttctgtatgctaacaacattttatgtgtaacaaattgtagggatgtggaatagcaattaaaaaaacagagctaatcaaatacatcaaattctgccttgtcttcacattccttttattttgtcgcttgcagagttctgaagatgtattgattgacaatcaagcagctgaggaagggtatcagaactttgaggtgatcagccatccatgcaagcgcctaagggtatcggtcaagagagaaagcggggcgcactccgaggatgagagtgttgcccccacagtctctgtgaagaaagaagctcaggaagaagccacaaccagcttcggtctccaggcagcgttttttaagcccggctacacaggcaagcggagaaggaggatgcctaaaattcaaagacgaggcggttcatccgcctctcctttttcgtcttggatttcctctcgtattcgtaaaaagcggcaattctaaggggggactagctacctcagacaatcgatcttccagtttagcttctgatctgaacttttagttagatgagatgatgacggcaactgcagttcttttccctttctctttgtacctgatatattaacgatgacatatgagcaatctggaaatgtggcacgatggcttcatc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0366300, RefSeq:Os05g0366300