Os06g0656000

From RiceWiki
Revision as of 20:27, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0656000

Description

Alcohol oxidase family protein

Version

NM_001188007.1 GI:297725144 GeneID:9266710

Length

3353 bp

Definition

Oryza sativa Japonica Group Os06g0656000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:27781487..27784839

Sequence Coding Region

27781487..27781577,27781676..27782064,27782267..27782582,27783524..27784424,27784758..27784839

Expression

GEO Profiles:Os06g0656000

Genome Context

<gbrowseImage1> name=NC_008399:27781487..27784839 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:27781487..27784839 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccattcccacccgcctccacctcctcctcgccgctctcctcgtcgcgccaaccctcgccgccgcccagccccgcggtttcggaggggtggtggcgccgccgccggcgtacgcgcggtacgtggtggacgcggcggagacggcggcggaggaggcgtacgactacatcgtggtcgggggaggcacggcggggtgcccgctcgccgcgacgctggccgggccggggggcgggcgcgtgctggtgctggagcggggcggcgcgcccgcggagttcccgccgctcgccaccgcgggcgggttcgtcaggacgctcgccatggcggacccggcgcccgagtcggacgcgcccgcgcagaccttcgcctccgaggacggcgtgcccaacgtccgcgcccgcgtcctcggcggcgccacctccatcaacgccggcttctactcgcgcgcccaccctgactggttccgcagccacggcgagggtggtgaggcgatgaattgggacatgaagctagtgaattcgtcctacgagtgggtggagcgtgaactggcgttccagccggtggtgcgtgggtggcaggcggcggtgcgtgcggggttgctggaagctaatgtgacgccatggaacgggtttacaatggaccatgtctctggcaccaaggttggtgccaccacgttcgattcgtcaggccgccgccggagtgccgcagatctcctcgcctttgcacgccctggccgtctccgtgttgccatccgtgcgacggttactcgcatcatcatgagcccaattgaacctgttgcacgccgtggaaggtctccacagccagcagtagcagcaagcggtgtcgtttaccaggaccgtcttctccagcagcaccacgcattgttgcgcccagggggggaggttatactttctgcaggctccctagggagtccccagttgctgctcctcagtggcattggccctgccaatgatcttacatccctaggcatcccagtttttgctgatgtccctgatgttggcaagcatatgtttgacaacccccgtaacggcatctccatcatcccatcaatcccaatcgatcactcccttatccaggtagttggcattccttctgctaatgggaatgagtcctaccttgaggctgcatcatacattgttccccttgctcccatcttacgccgtggtggtccgttcagcccgtcttcgccactttatgttactgtggtaaccatcatggaaaaggttcctggaccattgtctgaaggttcactttggctcacatcatccaatcccttggagagcccttcagtgcggttcaactacttgagccgtcgtgaggacttggcacggtgtgtgacgggcatgcggcgtgtggcgaaagtgcttgagagcacgacaatggatgtgtttcgttcagcgatgggatcattgagccaagacagcaggaggagggagttcaggattgttggggctgcactgccagttgactggagaacaaatgacacagctctgggtgatttctgccagcagactgtggcaacattatggcattatcatggaggatgtgtagctggaagtgtggttgacagggatttccgtgtttttcgtgtgcgtgctcttcgtgtggtggatggatcaacattcagggaaacacctgggaccaatcctcaagccacaatcatgatgatgggcaggtatatagggcagaagatgattgatgagcgtcacagcagaaggcaagtcagaacatcaacagattcctcttccaacgcctga</cdnaseq>

Protein Sequence

<aaseq>MAAIPTRLHLLLAALLVAPTLAAAQPRGFGGVVAPPPAYARYVV DAAETAAEEAYDYIVVGGGTAGCPLAATLAGPGGGRVLVLERGGAPAEFPPLATAGGF VRTLAMADPAPESDAPAQTFASEDGVPNVRARVLGGATSINAGFYSRAHPDWFRSHGE GGEAMNWDMKLVNSSYEWVERELAFQPVVRGWQAAVRAGLLEANVTPWNGFTMDHVSG TKVGATTFDSSGRRRSAADLLAFARPGRLRVAIRATVTRIIMSPIEPVARRGRSPQPA VAASGVVYQDRLLQQHHALLRPGGEVILSAGSLGSPQLLLLSGIGPANDLTSLGIPVF ADVPDVGKHMFDNPRNGISIIPSIPIDHSLIQVVGIPSANGNESYLEAASYIVPLAPI LRRGGPFSPSSPLYVTVVTIMEKVPGPLSEGSLWLTSSNPLESPSVRFNYLSRREDLA RCVTGMRRVAKVLESTTMDVFRSAMGSLSQDSRRREFRIVGAALPVDWRTNDTALGDF CQQTVATLWHYHGGCVAGSVVDRDFRVFRVRALRVVDGSTFRETPGTNPQATIMMMGR YIGQKMIDERHSRRQVRTSTDSSSNA</aaseq>

Gene Sequence

<dnaseqindica>1..91#190..578#781..1096#2038..2938#3272..3353#atggccgccattcccacccgcctccacctcctcctcgccgctctcctcgtcgcgccaaccctcgccgccgcccagccccgcggtttcggaggtaacgccgcctaacgcctcgcgcctcgatatatgatcgtggacgctcccggttaatttcgatgtgtctgaatttgatgttagtctgattcgcggcaggggtggtggcgccgccgccggcgtacgcgcggtacgtggtggacgcggcggagacggcggcggaggaggcgtacgactacatcgtggtcgggggaggcacggcggggtgcccgctcgccgcgacgctggccgggccggggggcgggcgcgtgctggtgctggagcggggcggcgcgcccgcggagttcccgccgctcgccaccgcgggcgggttcgtcaggacgctcgccatggcggacccggcgcccgagtcggacgcgcccgcgcagaccttcgcctccgaggacggcgtgcccaacgtccgcgcccgcgtcctcggcggcgccacctccatcaacgccggcttctactcgcgcgcccaccctgactggttccgcagccacggcgaggtcagtgtctctcccccccccccccccccccctctttctctgcatctcactgccttcggttgttcatgcgcgtggcgcgtgcctgtcatgtctgcggtgttcgcgaagctagttcgacaacgaaattctcgtgcagaatcgagtaaacaaattaactagtgtcatgtctgatgaattcttttgtgaattgttggggattcagggtggtgaggcgatgaattgggacatgaagctagtgaattcgtcctacgagtgggtggagcgtgaactggcgttccagccggtggtgcgtgggtggcaggcggcggtgcgtgcggggttgctggaagctaatgtgacgccatggaacgggtttacaatggaccatgtctctggcaccaaggttggtgccaccacgttcgattcgtcaggccgccgccggagtgccgcagatctcctcgcctttgcacgccctggccgtctccgtgttgccatccgtgcgacggttactcgcatcatcatgagcccaattgaacctggtgagatgcattcttcttctaatacttgtttgcttgttactttgttgcctgtgcagtgcttcggaaaatatttgtctgaaagattgacatatgactgaattgacgtaaaatgtggacatttggtaaggccacttgagttatcattttcatccacatacttgttatgaacttatgatgtcttgagtcagcaaagtttgtttgattacttttcatgaaatgagtagactgcatgatcctgttagatacttagatagaacccaaagttcttctttaattacccttacttgatcatgccattcatttgcatgatgaatatacagaggaagttatgtgcctgtgtatttgtgtaatgcagatgatgatcagatgatgccattctgggtcaaacacatttatcatatactctactagttaagagcatgttgcaatgctgattttttttattaaaaaaaatgacactgagcataaaagagctttcttcaatgttctacactgtttttctagaagattcgctaattatgtatttgttgagaaatatagatacaattttagaaccagtctagtactgatacttgtgaatagttgtgctcatctcaatttcatttacaagaaaaaaatactacatttttattctggtatgttatgaacttaaaaactttttcttggaaagagatgtgaactgaaaacaaagatgtcagatagaggagtagcccaatgactatggaactaaactgtcctgcggaatacgttactacaagccaaaacttcatgcttgttaggaattctaatttttgtgaaatgtactagattaactgctcctcatgctaaccattatccaaattctcctgaatcaatgatcatgtaataacacataacatttcatcataaactgttttaagtatgtgcgaatgaacttttatacttttgctgtacttgtccagttgcacgccgtggaaggtctccacagccagcagtagcagcaagcggtgtcgtttaccaggaccgtcttctccagcagcaccacgcattgttgcgcccagggggggaggttatactttctgcaggctccctagggagtccccagttgctgctcctcagtggcattggccctgccaatgatcttacatccctaggcatcccagtttttgctgatgtccctgatgttggcaagcatatgtttgacaacccccgtaacggcatctccatcatcccatcaatcccaatcgatcactcccttatccaggtagttggcattccttctgctaatgggaatgagtcctaccttgaggctgcatcatacattgttccccttgctcccatcttacgccgtggtggtccgttcagcccgtcttcgccactttatgttactgtggtaaccatcatggaaaaggttcctggaccattgtctgaaggttcactttggctcacatcatccaatcccttggagagcccttcagtgcggttcaactacttgagccgtcgtgaggacttggcacggtgtgtgacgggcatgcggcgtgtggcgaaagtgcttgagagcacgacaatggatgtgtttcgttcagcgatgggatcattgagccaagacagcaggaggagggagttcaggattgttggggctgcactgccagttgactggagaacaaatgacacagctctgggtgatttctgccagcagactgtggcaacattatggcattatcatggaggatgtgtagctggaagtgtggttgacagggatttccgtgtttttcgtgtgcgtgctcttcgtgtggtggatggatcaacattcagggaaacacctgggaccaatcctcaagccacaatcatgatgatgggcaggtatgaatgagaatagctcttgcaaattgattactgcaggagatggttcttagcaaggattagatatccatcaaatattttattccataatagtataattcagtagcactataatctgctactgttggttgtatttaaggcaacaaataatttaggttttcaagcaagtttatcccatgttctgtcaggaaatttgaatgcaatgtctcctagctttaggaggaaatgaaaatcacatgcatagcacatagtaacagtctaggatctaagatccctctctacaatggtccagttgtaactgttgcaatgaccttgtttattaacatttgacaggtatatagggcagaagatgattgatgagcgtcacagcagaaggcaagtcagaacatcaacagattcctcttccaacgcctga</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0656000, RefSeq:Os06g0656000